RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 SLC24A4Q8NFF2 622 aa15.28■□□□□ 0.04
PTP4A1-201ENST00000370651 COX14Q96I36 57 aa15.28■□□□□ 0.04
PTP4A1-201ENST00000370651 CA10Q9NS85 328 aa15.28■□□□□ 0.04
PTP4A1-201ENST00000370651 ABCD4O14678 606 aa15.28■□□□□ 0.04
PTP4A1-201ENST00000370651 PDCD1Q15116 288 aa15.28■□□□□ 0.04
PTP4A1-201ENST00000370651 NCMAPQ5T1S8 102 aa15.28■□□□□ 0.04
PTP4A1-201ENST00000370651 SLC25A42Q86VD7 318 aa15.28■□□□□ 0.04
PTP4A1-201ENST00000370651 KIF13BQ9NQT8 1826 aa15.28■□□□□ 0.04
PTP4A1-201ENST00000370651 GLI3P10071 1580 aa15.28■□□□□ 0.04
PTP4A1-201ENST00000370651 ABCA3Q99758 1704 aa15.28■□□□□ 0.04
PTP4A1-201ENST00000370651 MAP1LC3B2A6NCE7 125 aa15.27■□□□□ 0.04
PTP4A1-201ENST00000370651 GALR1P47211 349 aa15.27■□□□□ 0.04
PTP4A1-201ENST00000370651 LHX8Q68G74 356 aa15.27■□□□□ 0.04
PTP4A1-201ENST00000370651 ZNF770Q6IQ21 691 aaPredicted RBP15.27■□□□□ 0.04
PTP4A1-201ENST00000370651 SSX7Q7RTT5 188 aa15.27■□□□□ 0.04
PTP4A1-201ENST00000370651 MAP1LC3BQ9GZQ8 125 aa15.27■□□□□ 0.04
PTP4A1-201ENST00000370651 ZNF98A6NK75 572 aa15.27■□□□□ 0.04
PTP4A1-201ENST00000370651 RAC1P63000 192 aa15.27■□□□□ 0.04
PTP4A1-201ENST00000370651 TMEM267Q0VDI3 215 aaPredicted RBP15.27■□□□□ 0.04
PTP4A1-201ENST00000370651 ZNF816Q0VGE8 651 aaPredicted RBP15.27■□□□□ 0.04
PTP4A1-201ENST00000370651 SCCPDHQ8NBX0 429 aa15.27■□□□□ 0.04
PTP4A1-201ENST00000370651 TMEM104Q8NE00 496 aa15.27■□□□□ 0.04
PTP4A1-201ENST00000370651 FOXB1Q99853 325 aa15.27■□□□□ 0.04
PTP4A1-201ENST00000370651 C3orf85A0A1B0GTC6 90 aa15.27■□□□□ 0.04
PTP4A1-201ENST00000370651 XKRY2A2RUG3 117 aa15.27■□□□□ 0.04
PTP4A1-201ENST00000370651 MPZL1O95297 269 aa15.27■□□□□ 0.04
PTP4A1-201ENST00000370651 OR5G3P0C626 314 aa15.27■□□□□ 0.04
PTP4A1-201ENST00000370651 NDUFB7P17568 137 aa15.27■□□□□ 0.04
PTP4A1-201ENST00000370651 HLA-DRB3P79483 266 aa15.27■□□□□ 0.04
PTP4A1-201ENST00000370651 DUSP2Q05923 314 aa15.27■□□□□ 0.04
PTP4A1-201ENST00000370651 PCDHGA9Q9Y5G4 932 aaKnown RBP15.27■□□□□ 0.04
PTP4A1-201ENST00000370651 HSBP1O75506 76 aa15.27■□□□□ 0.03
PTP4A1-201ENST00000370651 CBR3O75828 277 aa15.27■□□□□ 0.03
PTP4A1-201ENST00000370651 CRYBA1P05813 215 aa15.27■□□□□ 0.03
PTP4A1-201ENST00000370651 EDARADDQ8WWZ3 215 aa15.27■□□□□ 0.03
PTP4A1-201ENST00000370651 NGBQ9NPG2 151 aa15.27■□□□□ 0.03
PTP4A1-201ENST00000370651 ZNF107Q9UII5 783 aaPredicted RBP15.27■□□□□ 0.03
PTP4A1-201ENST00000370651 SIT1Q9Y3P8 196 aa15.27■□□□□ 0.03
PTP4A1-201ENST00000370651 C7orf77A4D0Y5 90 aa15.26■□□□□ 0.03
PTP4A1-201ENST00000370651 RBFOX3A6NFN3 312 aa15.26■□□□□ 0.03
PTP4A1-201ENST00000370651 DEFA4P12838 97 aa15.26■□□□□ 0.03
PTP4A1-201ENST00000370651 GLB1P16278 677 aa15.26■□□□□ 0.03
PTP4A1-201ENST00000370651 RAB35Q15286 201 aa15.26■□□□□ 0.03
PTP4A1-201ENST00000370651 SURF2Q15527 256 aaPredicted RBP15.26■□□□□ 0.03
PTP4A1-201ENST00000370651 LILRA6Q6PI73 481 aa15.26■□□□□ 0.03
PTP4A1-201ENST00000370651 VN1R1Q9GZP7 353 aa15.26■□□□□ 0.03
PTP4A1-201ENST00000370651 LRRC30A6NM36 301 aa15.26■□□□□ 0.03
PTP4A1-201ENST00000370651 PLPP3O14495 311 aa15.26■□□□□ 0.03
PTP4A1-201ENST00000370651 CT45A10P0DMU9 189 aa15.26■□□□□ 0.03
PTP4A1-201ENST00000370651 GPM6AP51674 278 aa15.26■□□□□ 0.03
PTP4A1-201ENST00000370651 RPS4Y2Q8TD47 263 aa15.26■□□□□ 0.03
PTP4A1-201ENST00000370651 CLDN23Q96B33 292 aa15.26■□□□□ 0.03
PTP4A1-201ENST00000370651 NRTNQ99748 197 aa15.26■□□□□ 0.03
PTP4A1-201ENST00000370651 TRAV8-7A0A075B6U6 113 aa15.26■□□□□ 0.03
PTP4A1-201ENST00000370651 KRASP01116 189 aa15.26■□□□□ 0.03
PTP4A1-201ENST00000370651 DAOP14920 347 aa15.26■□□□□ 0.03
PTP4A1-201ENST00000370651 ZBTB25P24278 435 aa15.26■□□□□ 0.03
PTP4A1-201ENST00000370651 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.26■□□□□ 0.03
PTP4A1-201ENST00000370651 GALMQ96C23 342 aa15.26■□□□□ 0.03
PTP4A1-201ENST00000370651 S1PR3Q99500 378 aa15.26■□□□□ 0.03
PTP4A1-201ENST00000370651 ZMAT5Q9UDW3 170 aaKnown RBP15.26■□□□□ 0.03
PTP4A1-201ENST00000370651 CACFD1Q9UGQ2 172 aa15.26■□□□□ 0.03
PTP4A1-201ENST00000370651 GALR2O43603 387 aaPredicted RBP15.26■□□□□ 0.03
PTP4A1-201ENST00000370651 CTSDP07339 412 aaPredicted RBP15.26■□□□□ 0.03
PTP4A1-201ENST00000370651 ERVFC1-1P60608 527 aa15.26■□□□□ 0.03
PTP4A1-201ENST00000370651 PAPPAQ13219 1627 aa15.26■□□□□ 0.03
PTP4A1-201ENST00000370651 H3BMH7 237 aa15.25■□□□□ 0.03
PTP4A1-201ENST00000370651 FAM157BP0CG42 384 aa15.25■□□□□ 0.03
PTP4A1-201ENST00000370651 HNRNPA3P51991 378 aaKnown RBP15.25■□□□□ 0.03
PTP4A1-201ENST00000370651 MESTQ5EB52 335 aa15.25■□□□□ 0.03
PTP4A1-201ENST00000370651 APOBEC3DQ96AK3 386 aaPredicted RBP15.25■□□□□ 0.03
PTP4A1-201ENST00000370651 LRRC61Q9BV99 259 aa15.25■□□□□ 0.03
PTP4A1-201ENST00000370651 GPR37O15354 613 aa15.25■□□□□ 0.03
PTP4A1-201ENST00000370651 ETFDHQ16134 617 aa15.25■□□□□ 0.03
PTP4A1-201ENST00000370651 TWSG1Q9GZX9 223 aa15.25■□□□□ 0.03
PTP4A1-201ENST00000370651 PRR13Q9NZ81 148 aa15.25■□□□□ 0.03
PTP4A1-201ENST00000370651 SIRT4Q9Y6E7 314 aaPredicted RBP15.25■□□□□ 0.03
PTP4A1-201ENST00000370651 CHRDL1Q9BU40 450 aa15.25■□□□□ 0.03
PTP4A1-201ENST00000370651 PDCD6O75340 191 aa15.25■□□□□ 0.03
PTP4A1-201ENST00000370651 AGFG1P52594 562 aaKnown RBP15.25■□□□□ 0.03
PTP4A1-201ENST00000370651 SLC38A11Q08AI6 406 aa15.25■□□□□ 0.03
PTP4A1-201ENST00000370651 MIOXQ9UGB7 285 aa15.25■□□□□ 0.03
PTP4A1-201ENST00000370651 ZNF391Q9UJN7 358 aa15.25■□□□□ 0.03
PTP4A1-201ENST00000370651 AMDHD2Q9Y303 409 aa15.25■□□□□ 0.03
PTP4A1-201ENST00000370651 NMBP08949 121 aa15.24■□□□□ 0.03
PTP4A1-201ENST00000370651 RTL8BQ17RB0 113 aa15.24■□□□□ 0.03
PTP4A1-201ENST00000370651 ISXQ2M1V0 245 aa15.24■□□□□ 0.03
PTP4A1-201ENST00000370651 OR2V1Q8NHB1 315 aa15.24■□□□□ 0.03
PTP4A1-201ENST00000370651 FGF14Q92915 247 aa15.24■□□□□ 0.03
PTP4A1-201ENST00000370651 COMMD5Q9GZQ3 224 aa15.24■□□□□ 0.03
PTP4A1-201ENST00000370651 DECR2Q9NUI1 292 aa15.24■□□□□ 0.03
PTP4A1-201ENST00000370651 STRCQ7RTU9 1775 aa15.24■□□□□ 0.03
PTP4A1-201ENST00000370651 A0A1W2PPE2 198 aa15.24■□□□□ 0.03
PTP4A1-201ENST00000370651 ITGBL1O95965 494 aaPredicted RBP15.24■□□□□ 0.03
PTP4A1-201ENST00000370651 CXCL2P19875 107 aa15.24■□□□□ 0.03
PTP4A1-201ENST00000370651 DSCR4P56555 118 aaPredicted RBP15.24■□□□□ 0.03
PTP4A1-201ENST00000370651 HIST1H3AP68431 136 aa15.24■□□□□ 0.03
PTP4A1-201ENST00000370651 OR10AC1Q8NH08 325 aa15.24■□□□□ 0.03
PTP4A1-201ENST00000370651 MCHR2Q969V1 340 aa15.24■□□□□ 0.03
PTP4A1-201ENST00000370651 MS4A10Q96PG2 267 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms