RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 NDC1Q9BTX1 674 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 MRPL13Q9BYD1 178 aaKnown RBP6.02□□□□□ -1.45
CSDE1-204ENST00000369530 ACTRT3Q9BYD9 372 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 CSTL1Q9H114 145 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 INPP5EQ9NRR6 644 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 GPR173Q9NS66 373 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 H2AFY2Q9P0M6 372 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-204ENST00000369530 CLCF1Q9UBD9 225 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 CENPEQ02224 2701 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 BPNT1O95861 308 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 IGFBP1P08833 259 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-204ENST00000369530 CPMP14384 443 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 ELAVL4P26378 380 aaKnown RBP6.02□□□□□ -1.45
CSDE1-204ENST00000369530 SULT1A2P50226 295 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 AKR1C2P52895 323 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 OC90Q02509 493 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-204ENST00000369530 TLE1Q04724 770 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 AKR1C1Q04828 323 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 UBE2V2Q15819 145 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 KRTCAP3Q53RY4 240 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 C1QL3Q5VWW1 255 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 LEMD1Q68G75 181 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 LINC00114Q6XXX2 140 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 BEST3Q8N1M1 668 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 CORO2AQ92828 525 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 FER1L6-AS2Q96M78 137 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 ALKBH3Q96Q83 286 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-204ENST00000369530 URM1Q9BTM9 101 aaKnown RBP6.02□□□□□ -1.45
CSDE1-204ENST00000369530 TEX12Q9BXU0 123 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 HES7Q9BYE0 225 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 ZNF160Q9HCG1 818 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 SLC2A9Q9NRM0 540 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 OSGIN2Q9Y236 505 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 ZNF337Q9Y3M9 751 aa6.02□□□□□ -1.45
CSDE1-204ENST00000369530 FREM3P0C091 2139 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 TLX2O43763 284 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-204ENST00000369530 CA11O75493 328 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 GPR75O95800 540 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 FHL1Q13642 323 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 MEF2DQ14814 521 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 ALG10BQ5I7T1 473 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 SLC22A25Q6T423 547 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 LRRC69Q6ZNQ3 347 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 SHISA6Q6ZSJ9 500 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 GATSQ8NAP1 163 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 RPS4Y2Q8TD47 263 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 OR8D2Q9GZM6 311 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 TMEM185BQ9H7F4 350 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 PRTFDC1Q9NRG1 225 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 CNIH4Q9P003 139 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 DNAJB11Q9UBS4 358 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 C19orf53Q9UNZ5 99 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-204ENST00000369530 CACNA1CQ13936 2221 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 ALPK2Q86TB3 2170 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 PPP1R3DO95685 299 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 NUDT14O95848 222 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 NPY4RP50391 375 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 C4orf17Q53FE4 359 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 C1orf185Q5T7R7 199 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 SFRP4Q6FHJ7 346 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-204ENST00000369530 UNQ9370/PRO34162Q6UXP9 181 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 FRRS1Q6ZNA5 592 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 GALNTL5Q7Z4T8 443 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 MDGA2Q7Z553 956 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 TMEM183AQ8IXX5 376 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 ASB17Q8WXJ9 295 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 DNAJA3Q96EY1 480 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 DGAT2Q96PD7 388 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 RPS10P5Q9NQ39 176 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 MEPEQ9NQ76 525 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-204ENST00000369530 FLRT3Q9NZU0 649 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 ZNF107Q9UII5 783 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-204ENST00000369530 PITPNC1Q9UKF7 332 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 FOXJ3Q9UPW0 622 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 PTRH2Q9Y3E5 179 aaKnown RBP6.01□□□□□ -1.45
CSDE1-204ENST00000369530 MMP24Q9Y5R2 645 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 AHCTF1Q8WYP5 2266 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 CD8B2A6NJW9 211 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 ACOT7O00154 380 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 GPRIN2O60269 458 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 IL2RAP01589 272 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 CD8BP10966 210 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 ATF1P18846 271 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 ARR3P36575 388 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 GPR4P46093 362 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 TAS2R19P59542 299 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 ACTBP60709 375 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 ACTA2P62736 377 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 ACTG1P63261 375 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 ACTG2P63267 376 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 ACTC1P68032 377 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 ACTA1P68133 377 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 PODNL1Q6PEZ8 512 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 IL20RBQ6UXL0 311 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 FAM24BQ8N5W8 94 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 GPR32P1Q8NGA4 272 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 OR52I2Q8NH67 350 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 RAB40AQ8WXH6 277 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 PGLYRP3Q96LB9 341 aa6.01□□□□□ -1.45
CSDE1-204ENST00000369530 PRRT1Q99946 306 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms