RNA–Protein interactions for RNA: ENST00000369278.4

UFL1-201, Transcript of UFM1 specific ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFL1, Length 4,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFL1-201ENST00000369278 ZNF665Q9H7R5 613 aa6.89□□□□□ -1.31
UFL1-201ENST00000369278 MBNL1Q9NR56 388 aaKnown RBP6.89□□□□□ -1.31
UFL1-201ENST00000369278 OR6C3Q9NZP0 311 aa6.89□□□□□ -1.31
UFL1-201ENST00000369278 MMACHCQ9Y4U1 282 aa6.89□□□□□ -1.31
UFL1-201ENST00000369278 LRP12Q9Y561 859 aa6.89□□□□□ -1.31
UFL1-201ENST00000369278 FREM3P0C091 2139 aa6.89□□□□□ -1.31
UFL1-201ENST00000369278 DSPPQ9NZW4 1301 aa6.89□□□□□ -1.31
UFL1-201ENST00000369278 VEGFDO43915 354 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 TUSC2O75896 110 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 FGF19O95750 216 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 GSTP1P09211 210 aaKnown RBP6.88□□□□□ -1.31
UFL1-201ENST00000369278 ZNF43P17038 809 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 PGCP20142 388 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 FZD2Q14332 565 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 IZUMO4Q1ZYL8 232 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 PRR27Q6MZM9 219 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 HSPB9Q9BQS6 159 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 FAAP24Q9BTP7 215 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 VN1R3Q9BXE9 311 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 PARD6GQ9BYG4 376 aaPredicted RBP6.88□□□□□ -1.31
UFL1-201ENST00000369278 C1orf198Q9H425 327 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 UBE2L5PA0A1B0GUS4 154 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 BMPR1BO00238 502 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 TNFRSF10CO14798 259 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 ZNF264O43296 627 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 LIMS1P48059 325 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 RPS15AP62244 130 aaKnown RBP6.88□□□□□ -1.31
UFL1-201ENST00000369278 HSF1Q00613 529 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 TNFRSF9Q07011 255 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 RUNX2Q13950 521 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 SGCBQ16585 318 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 ZNF468Q5VIY5 522 aaPredicted RBP6.88□□□□□ -1.31
UFL1-201ENST00000369278 WBP2NLQ6ICG8 309 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 PRSS35Q8N3Z0 413 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 LMX1AQ8TE12 382 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 GTF3AQ92664 365 aaKnown RBP6.88□□□□□ -1.31
UFL1-201ENST00000369278 TSLPQ969D9 159 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 ST6GALNAC6Q969X2 333 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 ZNF426Q9BUY5 554 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 WBP1LQ9NX94 342 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 TMEM184BQ9Y519 407 aaPredicted RBP6.88□□□□□ -1.31
UFL1-201ENST00000369278 POMT1Q9Y6A1 747 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 LRP5LA4QPB2 252 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 C17orf51A8MQB3 221 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 SIRPB1O00241 398 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 SFT2D2O95562 160 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 HIST1H1BP16401 226 aaKnown RBP6.88□□□□□ -1.31
UFL1-201ENST00000369278 PRPH2P23942 346 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 FCER1GP30273 86 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 RPS23P62266 143 aaKnown RBP6.88□□□□□ -1.31
UFL1-201ENST00000369278 C16orf47Q6ZP98 133 aaPredicted RBP6.88□□□□□ -1.31
UFL1-201ENST00000369278 TMPRSS7Q7RTY8 843 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 OR1K1Q8NGR3 316 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 Q8WTZ3 238 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 SCARF2Q96GP6 870 aaPredicted RBP6.88□□□□□ -1.31
UFL1-201ENST00000369278 FOXQ1Q9C009 403 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 PPP1R3CQ9UQK1 317 aa6.88□□□□□ -1.31
UFL1-201ENST00000369278 A0A1W2PNR3 127 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 TK1P04183 234 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 NPSP0C0P6 89 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 ATP6V0CP27449 155 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 THBS3P49746 956 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 TRA2AQ13595 282 aaKnown RBP eCLIP6.87□□□□□ -1.31
UFL1-201ENST00000369278 ARTNQ5T4W7 220 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 PHF19Q5T6S3 580 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 PRAMEF20Q5VT98 475 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 RDH5Q92781 318 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 APH1AQ96BI3 265 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 STARD4Q96DR4 205 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 ALX4Q9H161 411 aaPredicted RBP6.87□□□□□ -1.31
UFL1-201ENST00000369278 MYOTQ9UBF9 498 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 RNF150Q9ULK6 438 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 PLXNA4Q9HCM2 1894 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 ANKRD36A6QL64 1941 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 HRKO00198 91 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 HS3ST1O14792 307 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 HIST1H2BKO60814 126 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 HIST1H2BJP06899 126 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 HMGA1P17096 107 aaKnown RBP6.87□□□□□ -1.31
UFL1-201ENST00000369278 TMEM11P17152 192 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 HIST1H2BOP23527 126 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 HIST1H2BBP33778 126 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 ARL3P36405 182 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 TNFSF10P50591 281 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 DAP3P51398 398 aaKnown RBP6.87□□□□□ -1.31
UFL1-201ENST00000369278 HIST1H2BDP58876 126 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 HIST1H2BCP62807 126 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 HIST2H2BEQ16778 126 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 ANKRD55Q3KP44 614 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.87□□□□□ -1.31
UFL1-201ENST00000369278 ZNF808Q8N4W9 903 aaPredicted RBP6.87□□□□□ -1.31
UFL1-201ENST00000369278 CMTM2Q8TAZ6 248 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 HIST1H2BHQ93079 126 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 HIST1H2BNQ99877 126 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 HIST1H2BMQ99879 126 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 RSG1Q9BU20 258 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 TMEM9BQ9NQ34 198 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 KLHL42Q9P2K6 505 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 SERTAD3Q9UJW9 196 aa6.87□□□□□ -1.31
UFL1-201ENST00000369278 MRPS2Q9Y399 296 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms