RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 A0A1B0GTI1 187 aa7.54□□□□□ -1.2
TPM3-213ENST00000368545 LOC390937A0A1W2PQ73 354 aa7.54□□□□□ -1.2
TPM3-213ENST00000368545 A8MZ25 164 aa7.54□□□□□ -1.2
TPM3-213ENST00000368545 SLC17A2O00624 439 aa7.54□□□□□ -1.2
TPM3-213ENST00000368545 PAHP00439 452 aa7.54□□□□□ -1.2
TPM3-213ENST00000368545 CRHP06850 196 aa7.54□□□□□ -1.2
TPM3-213ENST00000368545 ERCC1P07992 297 aaPredicted RBP7.54□□□□□ -1.2
TPM3-213ENST00000368545 HOXD4P09016 255 aaPredicted RBP7.54□□□□□ -1.2
TPM3-213ENST00000368545 ELK1P19419 428 aa7.54□□□□□ -1.2
TPM3-213ENST00000368545 DNASE1P24855 282 aa7.54□□□□□ -1.2
TPM3-213ENST00000368545 DDOSTP39656 456 aa7.54□□□□□ -1.2
TPM3-213ENST00000368545 NR4A2P43354 598 aa7.54□□□□□ -1.2
TPM3-213ENST00000368545 DEFA1P59665 94 aa7.54□□□□□ -1.2
TPM3-213ENST00000368545 DEFA3P59666 94 aa7.54□□□□□ -1.2
TPM3-213ENST00000368545 BPIFB3P59826 476 aa7.54□□□□□ -1.2
TPM3-213ENST00000368545 IL18Q14116 193 aa7.54□□□□□ -1.2
TPM3-213ENST00000368545 ZNF79Q15937 498 aa7.54□□□□□ -1.2
TPM3-213ENST00000368545 RSPO1Q2MKA7 263 aaPredicted RBP7.54□□□□□ -1.2
TPM3-213ENST00000368545 HES5Q5TA89 166 aa7.54□□□□□ -1.2
TPM3-213ENST00000368545 Q6ZSR3 168 aa7.54□□□□□ -1.2
TPM3-213ENST00000368545 OR1K1Q8NGR3 316 aa7.54□□□□□ -1.2
TPM3-213ENST00000368545 OR1J2Q8NGS2 313 aa7.54□□□□□ -1.2
TPM3-213ENST00000368545 AKR7LQ8NHP1 331 aa7.54□□□□□ -1.2
TPM3-213ENST00000368545 LGALS14Q8TCE9 139 aa7.54□□□□□ -1.2
TPM3-213ENST00000368545 TMEM158Q8WZ71 300 aa7.54□□□□□ -1.2
TPM3-213ENST00000368545 ZFP3Q96NJ6 502 aa7.54□□□□□ -1.2
TPM3-213ENST00000368545 SOSTQ9BQB4 213 aa7.54□□□□□ -1.2
TPM3-213ENST00000368545 RGCCQ9H4X1 137 aa7.54□□□□□ -1.2
TPM3-213ENST00000368545 ABCB10Q9NRK6 738 aa7.54□□□□□ -1.2
TPM3-213ENST00000368545 ZNF224Q9NZL3 707 aa7.54□□□□□ -1.2
TPM3-213ENST00000368545 EXTL2Q9UBQ6 330 aa7.54□□□□□ -1.2
TPM3-213ENST00000368545 ITPR3Q14573 2671 aa7.53□□□□□ -1.2
TPM3-213ENST00000368545 MSTNO14793 375 aa7.53□□□□□ -1.2
TPM3-213ENST00000368545 PAGE4O60829 102 aa7.53□□□□□ -1.2
TPM3-213ENST00000368545 DHRS3O75911 302 aa7.53□□□□□ -1.2
TPM3-213ENST00000368545 IFNA2P01563 188 aa7.53□□□□□ -1.2
TPM3-213ENST00000368545 EIF4EP06730 217 aaKnown RBP7.53□□□□□ -1.2
TPM3-213ENST00000368545 CD37P11049 281 aa7.53□□□□□ -1.2
TPM3-213ENST00000368545 PLP2Q04941 152 aa7.53□□□□□ -1.2
TPM3-213ENST00000368545 IL13RA2Q14627 380 aa7.53□□□□□ -1.2
TPM3-213ENST00000368545 RAB11BQ15907 218 aa7.53□□□□□ -1.2
TPM3-213ENST00000368545 PYDC2Q56P42 97 aa7.53□□□□□ -1.2
TPM3-213ENST00000368545 PABPC1L2AQ5JQF8 200 aa7.53□□□□□ -1.2
TPM3-213ENST00000368545 C9orf135Q5VTT2 229 aa7.53□□□□□ -1.2
TPM3-213ENST00000368545 ZNF324BQ6AW86 544 aaPredicted RBP7.53□□□□□ -1.2
TPM3-213ENST00000368545 ASPHD2Q6ICH7 369 aa7.53□□□□□ -1.2
TPM3-213ENST00000368545 ZNF585AQ6P3V2 769 aa7.53□□□□□ -1.2
TPM3-213ENST00000368545 Q6ZT83 130 aa7.53□□□□□ -1.2
TPM3-213ENST00000368545 CCDC36Q8IYA8 594 aa7.53□□□□□ -1.2
TPM3-213ENST00000368545 GCNT2Q8N0V5 402 aa7.53□□□□□ -1.2
TPM3-213ENST00000368545 C9orf106Q8NAJ2 232 aa7.53□□□□□ -1.2
TPM3-213ENST00000368545 OR8H1Q8NGG4 311 aa7.53□□□□□ -1.2
TPM3-213ENST00000368545 OR6M1Q8NGM8 313 aa7.53□□□□□ -1.2
TPM3-213ENST00000368545 SETD6Q8TBK2 473 aa7.53□□□□□ -1.2
TPM3-213ENST00000368545 SLC7A6Q92536 515 aa7.53□□□□□ -1.2
TPM3-213ENST00000368545 FGGYQ96C11 551 aa7.53□□□□□ -1.2
TPM3-213ENST00000368545 R3HDM4Q96D70 268 aa7.53□□□□□ -1.2
TPM3-213ENST00000368545 SDHCQ99643 169 aaPredicted RBP7.53□□□□□ -1.2
TPM3-213ENST00000368545 TMEM138Q9NPI0 162 aa7.53□□□□□ -1.2
TPM3-213ENST00000368545 N6AMT1Q9Y5N5 214 aa7.53□□□□□ -1.2
TPM3-213ENST00000368545 V9GYS6 101 aa7.53□□□□□ -1.2
TPM3-213ENST00000368545 LAMA5O15230 3695 aa7.53□□□□□ -1.2
TPM3-213ENST00000368545 C17orf100A8MU93 164 aa7.52□□□□□ -1.2
TPM3-213ENST00000368545 XRCC2O43543 280 aa7.52□□□□□ -1.2
TPM3-213ENST00000368545 SULT1B1O43704 296 aa7.52□□□□□ -1.2
TPM3-213ENST00000368545 WISP2O76076 250 aa7.52□□□□□ -1.2
TPM3-213ENST00000368545 TPOP07202 933 aa7.52□□□□□ -1.2
TPM3-213ENST00000368545 RAB3AP20336 220 aa7.52□□□□□ -1.2
TPM3-213ENST00000368545 BDKRB2P30411 391 aa7.52□□□□□ -1.2
TPM3-213ENST00000368545 CA7P43166 264 aa7.52□□□□□ -1.2
TPM3-213ENST00000368545 PITPNBP48739 271 aa7.52□□□□□ -1.2
TPM3-213ENST00000368545 IFITM3Q01628 133 aa7.52□□□□□ -1.2
TPM3-213ENST00000368545 CDH26Q8IXH8 852 aa7.52□□□□□ -1.2
TPM3-213ENST00000368545 CNEP1R1Q8N9A8 125 aa7.52□□□□□ -1.2
TPM3-213ENST00000368545 DNAAF1Q8NEP3 725 aa7.52□□□□□ -1.2
TPM3-213ENST00000368545 OR1M1Q8NGA1 313 aa7.52□□□□□ -1.2
TPM3-213ENST00000368545 OR52L2PQ8NGH6 319 aa7.52□□□□□ -1.2
TPM3-213ENST00000368545 FGFBP3Q8TAT2 258 aa7.52□□□□□ -1.2
TPM3-213ENST00000368545 FAM57AQ8TBR7 257 aa7.52□□□□□ -1.2
TPM3-213ENST00000368545 C2CD4CQ8TF44 421 aa7.52□□□□□ -1.2
TPM3-213ENST00000368545 CHPT1Q8WUD6 406 aa7.52□□□□□ -1.2
TPM3-213ENST00000368545 PP6455Q8WZ26 134 aa7.52□□□□□ -1.2
TPM3-213ENST00000368545 ADAT3Q96EY9 351 aaPredicted RBP7.52□□□□□ -1.2
TPM3-213ENST00000368545 BOD1Q96IK1 185 aa7.52□□□□□ -1.2
TPM3-213ENST00000368545 FAM71F1Q96KD3 344 aaPredicted RBP7.52□□□□□ -1.2
TPM3-213ENST00000368545 SORCS2Q96PQ0 1159 aa7.52□□□□□ -1.2
TPM3-213ENST00000368545 UQCC2Q9BRT2 126 aa7.52□□□□□ -1.2
TPM3-213ENST00000368545 ABCG5Q9H222 651 aa7.52□□□□□ -1.2
TPM3-213ENST00000368545 PPP1R3EQ9H7J1 279 aa7.52□□□□□ -1.2
TPM3-213ENST00000368545 ZNF319Q9P2F9 582 aa7.52□□□□□ -1.2
TPM3-213ENST00000368545 SPENQ96T58 3664 aaKnown RBP7.52□□□□□ -1.21
TPM3-213ENST00000368545 hCG_1809904A0A1W2PP81 198 aa7.52□□□□□ -1.21
TPM3-213ENST00000368545 A0A1W2PPE2 198 aa7.52□□□□□ -1.21
TPM3-213ENST00000368545 A0A1W2PR64 198 aa7.52□□□□□ -1.21
TPM3-213ENST00000368545 TPPPO94811 219 aa7.52□□□□□ -1.21
TPM3-213ENST00000368545 PATE4P0C8F1 98 aa7.52□□□□□ -1.21
TPM3-213ENST00000368545 CD79AP11912 226 aa7.52□□□□□ -1.21
TPM3-213ENST00000368545 ABOP16442 354 aa7.52□□□□□ -1.21
TPM3-213ENST00000368545 COX5AP20674 150 aa7.52□□□□□ -1.21
TPM3-213ENST00000368545 AZGP1P25311 298 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms