RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 PIGLQ9Y2B2 252 aa13.02□□□□□ -0.33
CKS1B-202ENST00000368436 SIGLEC9Q9Y336 463 aa13.02□□□□□ -0.33
CKS1B-202ENST00000368436 TMEM14AQ9Y6G1 99 aa13.02□□□□□ -0.33
CKS1B-202ENST00000368436 A0A1W2PPH5 198 aa13.01□□□□□ -0.33
CKS1B-202ENST00000368436 MEGF11A6BM72 1044 aa13.01□□□□□ -0.33
CKS1B-202ENST00000368436 SRSF10O75494 262 aaKnown RBP13.01□□□□□ -0.33
CKS1B-202ENST00000368436 DHRS3O75911 302 aa13.01□□□□□ -0.33
CKS1B-202ENST00000368436 FAM107AO95990 144 aa13.01□□□□□ -0.33
CKS1B-202ENST00000368436 NRASP01111 189 aa13.01□□□□□ -0.33
CKS1B-202ENST00000368436 TTRP02766 147 aa13.01□□□□□ -0.33
CKS1B-202ENST00000368436 MRPL3P09001 348 aaKnown RBP13.01□□□□□ -0.33
CKS1B-202ENST00000368436 PGA5P0DJD9 388 aa13.01□□□□□ -0.33
CKS1B-202ENST00000368436 PRDX2P32119 198 aa13.01□□□□□ -0.33
CKS1B-202ENST00000368436 RIDAP52758 137 aaKnown RBP13.01□□□□□ -0.33
CKS1B-202ENST00000368436 CAPZA1P52907 286 aa13.01□□□□□ -0.33
CKS1B-202ENST00000368436 RPL31P62899 125 aaKnown RBP13.01□□□□□ -0.33
CKS1B-202ENST00000368436 LY6EQ16553 131 aa13.01□□□□□ -0.33
CKS1B-202ENST00000368436 ZNF829Q3KNS6 432 aaPredicted RBP13.01□□□□□ -0.33
CKS1B-202ENST00000368436 ZNF684Q5T5D7 378 aa13.01□□□□□ -0.33
CKS1B-202ENST00000368436 LCN1P1Q5VSP4 162 aa13.01□□□□□ -0.33
CKS1B-202ENST00000368436 TMEM42Q69YG0 159 aa13.01□□□□□ -0.33
CKS1B-202ENST00000368436 Q6ZTK2 550 aa13.01□□□□□ -0.33
CKS1B-202ENST00000368436 CCDC197Q8NCU1 140 aa13.01□□□□□ -0.33
CKS1B-202ENST00000368436 OR4C13Q8NGP0 309 aa13.01□□□□□ -0.33
CKS1B-202ENST00000368436 PIFOQ8TCI5 191 aa13.01□□□□□ -0.33
CKS1B-202ENST00000368436 DNAJC9Q8WXX5 260 aa13.01□□□□□ -0.33
CKS1B-202ENST00000368436 ZNF488Q96MN9 340 aa13.01□□□□□ -0.33
CKS1B-202ENST00000368436 RAB18Q9NP72 206 aa13.01□□□□□ -0.33
CKS1B-202ENST00000368436 DNAJB9Q9UBS3 223 aa13.01□□□□□ -0.33
CKS1B-202ENST00000368436 PLXNB1O43157 2135 aa13.01□□□□□ -0.33
CKS1B-202ENST00000368436 DSCAML1Q8TD84 2053 aa13□□□□□ -0.33
CKS1B-202ENST00000368436 J3QT63 122 aa13□□□□□ -0.33
CKS1B-202ENST00000368436 SLC1A7O00341 560 aa13□□□□□ -0.33
CKS1B-202ENST00000368436 SYNGR1O43759 233 aa13□□□□□ -0.33
CKS1B-202ENST00000368436 HAAOP46952 286 aa13□□□□□ -0.33
CKS1B-202ENST00000368436 CRISP1P54107 249 aa13□□□□□ -0.33
CKS1B-202ENST00000368436 CBX1P83916 185 aa13□□□□□ -0.33
CKS1B-202ENST00000368436 MFGE8Q08431 387 aaPredicted RBP13□□□□□ -0.33
CKS1B-202ENST00000368436 Q6ZSR3 168 aa13□□□□□ -0.33
CKS1B-202ENST00000368436 ZNF573Q86YE8 665 aa13□□□□□ -0.33
CKS1B-202ENST00000368436 NRBF2Q96F24 287 aa13□□□□□ -0.33
CKS1B-202ENST00000368436 NRIP2Q9BQI9 281 aa13□□□□□ -0.33
CKS1B-202ENST00000368436 HES4Q9HCC6 221 aa13□□□□□ -0.33
CKS1B-202ENST00000368436 USE1Q9NZ43 259 aa13□□□□□ -0.33
CKS1B-202ENST00000368436 V9GYS6 101 aa13□□□□□ -0.33
CKS1B-202ENST00000368436 A0A1B0GTI1 187 aa12.99□□□□□ -0.33
CKS1B-202ENST00000368436 PQLC2LA1A4F0 135 aa12.99□□□□□ -0.33
CKS1B-202ENST00000368436 DLGAP1O14490 977 aa12.99□□□□□ -0.33
CKS1B-202ENST00000368436 FKBP6O75344 327 aa12.99□□□□□ -0.33
CKS1B-202ENST00000368436 PAX6P26367 422 aa12.99□□□□□ -0.33
CKS1B-202ENST00000368436 CEBPDP49716 269 aaPredicted RBP12.99□□□□□ -0.33
CKS1B-202ENST00000368436 PTGES3Q15185 160 aaKnown RBP12.99□□□□□ -0.33
CKS1B-202ENST00000368436 CLVS2Q5SYC1 327 aa12.99□□□□□ -0.33
CKS1B-202ENST00000368436 FAHD1Q6P587 224 aa12.99□□□□□ -0.33
CKS1B-202ENST00000368436 LIAT1Q6ZQX7 453 aa12.99□□□□□ -0.33
CKS1B-202ENST00000368436 CALHM1Q8IU99 346 aa12.99□□□□□ -0.33
CKS1B-202ENST00000368436 ELMOD2Q8IZ81 293 aa12.99□□□□□ -0.33
CKS1B-202ENST00000368436 OR14K1Q8NGZ2 314 aa12.99□□□□□ -0.33
CKS1B-202ENST00000368436 OR2T27Q8NH04 317 aa12.99□□□□□ -0.33
CKS1B-202ENST00000368436 OR2T6Q8NHC8 308 aa12.99□□□□□ -0.33
CKS1B-202ENST00000368436 TTTY10Q9BZA0 68 aa12.99□□□□□ -0.33
CKS1B-202ENST00000368436 MOB1AQ9H8S9 216 aa12.99□□□□□ -0.33
CKS1B-202ENST00000368436 PAPOLBQ9NRJ5 636 aaKnown RBP12.99□□□□□ -0.33
CKS1B-202ENST00000368436 IKZF2Q9UKS7 526 aa12.99□□□□□ -0.33
CKS1B-202ENST00000368436 FOXJ3Q9UPW0 622 aa12.99□□□□□ -0.33
CKS1B-202ENST00000368436 POLDIP2Q9Y2S7 368 aa12.99□□□□□ -0.33
CKS1B-202ENST00000368436 hCG_1809904A0A1W2PP81 198 aa12.98□□□□□ -0.33
CKS1B-202ENST00000368436 A0A1W2PPE2 198 aa12.98□□□□□ -0.33
CKS1B-202ENST00000368436 A0A1W2PR64 198 aa12.98□□□□□ -0.33
CKS1B-202ENST00000368436 A0A1W2PRV1 198 aa12.98□□□□□ -0.33
CKS1B-202ENST00000368436 TCRBV3S1A0A5B6 114 aa12.98□□□□□ -0.33
CKS1B-202ENST00000368436 FAM90A8PA6NJQ4 464 aa12.98□□□□□ -0.33
CKS1B-202ENST00000368436 LOC110117498-PIK3R3F6TDL0 507 aa12.98□□□□□ -0.33
CKS1B-202ENST00000368436 CHST1O43916 411 aa12.98□□□□□ -0.33
CKS1B-202ENST00000368436 PRKYO43930 277 aa12.98□□□□□ -0.33
CKS1B-202ENST00000368436 OPN1MWP04001 364 aa12.98□□□□□ -0.33
CKS1B-202ENST00000368436 TK1P04183 234 aa12.98□□□□□ -0.33
CKS1B-202ENST00000368436 OPN1MW2P0DN77 364 aa12.98□□□□□ -0.33
CKS1B-202ENST00000368436 OPN1MW3P0DN78 364 aa12.98□□□□□ -0.33
CKS1B-202ENST00000368436 CCL3L1P16619 93 aa12.98□□□□□ -0.33
CKS1B-202ENST00000368436 MPZP25189 248 aa12.98□□□□□ -0.33
CKS1B-202ENST00000368436 BMXP51813 675 aa12.98□□□□□ -0.33
CKS1B-202ENST00000368436 DLX6P56179 175 aa12.98□□□□□ -0.33
CKS1B-202ENST00000368436 ERVFRD-1P60508 538 aa12.98□□□□□ -0.33
CKS1B-202ENST00000368436 EFNB1P98172 346 aa12.98□□□□□ -0.33
CKS1B-202ENST00000368436 ZNF273Q14593 569 aa12.98□□□□□ -0.33
CKS1B-202ENST00000368436 BEAN1Q3B7T3 259 aa12.98□□□□□ -0.33
CKS1B-202ENST00000368436 KPRPQ5T749 579 aaPredicted RBP12.98□□□□□ -0.33
CKS1B-202ENST00000368436 ZNF322Q6U7Q0 402 aaPredicted RBP12.98□□□□□ -0.33
CKS1B-202ENST00000368436 MEPCEQ7L2J0 689 aaKnown RBP12.98□□□□□ -0.33
CKS1B-202ENST00000368436 SPATA24Q86W54 205 aa12.98□□□□□ -0.33
CKS1B-202ENST00000368436 KLHDC1Q8N7A1 406 aa12.98□□□□□ -0.33
CKS1B-202ENST00000368436 DTX3Q8N9I9 347 aa12.98□□□□□ -0.33
CKS1B-202ENST00000368436 OR4M1Q8NGD0 313 aa12.98□□□□□ -0.33
CKS1B-202ENST00000368436 CNN2Q99439 309 aaKnown RBP12.98□□□□□ -0.33
CKS1B-202ENST00000368436 MNTQ99583 582 aa12.98□□□□□ -0.33
CKS1B-202ENST00000368436 APOL4Q9BPW4 351 aa12.98□□□□□ -0.33
CKS1B-202ENST00000368436 GPR173Q9NS66 373 aa12.98□□□□□ -0.33
CKS1B-202ENST00000368436 R4GMQ9 66 aa12.98□□□□□ -0.33
CKS1B-202ENST00000368436 DHRS7CA6NNS2 312 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms