RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 IGFBP7Q16270 282 aa1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 TAL2Q16559 108 aa1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 DUPD1Q68J44 220 aa1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 SLC25A25Q6KCM7 469 aa1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 APOBEC3HQ6NTF7 200 aaKnown RBP1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 MORN3Q6PF18 240 aaPredicted RBP1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 SPINT4Q6UDR6 99 aa1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 CASP12Q6UXS9 341 aa1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 LINC00469Q8N7U9 141 aa1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 ASCC1Q8N9N2 400 aaKnown RBP1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 OR6K6Q8NGW6 343 aa1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 OR52N1Q8NH53 320 aa1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 OR1S1Q8NH92 325 aa1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 RNF170Q96K19 258 aa1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 DERL3Q96Q80 235 aa1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 UTP23Q9BRU9 249 aaKnown RBP1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 MAP1LC3CQ9BXW4 147 aa1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 GAL3ST2Q9H3Q3 398 aa1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 IFNKQ9P0W0 207 aa1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 RAB22AQ9UL26 194 aa1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 FLVCR2Q9UPI3 526 aa1.71□□□□□ -2.14
ECHDC1-201ENST00000368287 SHROOM3Q8TF72 1996 aa1.7□□□□□ -2.14
ECHDC1-201ENST00000368287 ELP1O95163 1332 aa1.7□□□□□ -2.14
ECHDC1-201ENST00000368287 TRAV8-7A0A075B6U6 113 aa1.7□□□□□ -2.14
ECHDC1-201ENST00000368287 IGKV2-24A0A0C4DH68 120 aa1.7□□□□□ -2.14
ECHDC1-201ENST00000368287 FAM240AA0A1B0GVK7 77 aa1.7□□□□□ -2.14
ECHDC1-201ENST00000368287 A8MWL6 223 aa1.7□□□□□ -2.14
ECHDC1-201ENST00000368287 PRAMEF26H0Y7S4 382 aa1.7□□□□□ -2.14
ECHDC1-201ENST00000368287 ALOX12BO75342 701 aa1.7□□□□□ -2.14
ECHDC1-201ENST00000368287 CBR3O75828 277 aa1.7□□□□□ -2.14
ECHDC1-201ENST00000368287 MAS1P04201 325 aa1.7□□□□□ -2.14
ECHDC1-201ENST00000368287 HTR2CP28335 458 aa1.7□□□□□ -2.14
ECHDC1-201ENST00000368287 IDH2P48735 452 aaKnown RBP1.7□□□□□ -2.14
ECHDC1-201ENST00000368287 IL5RAQ01344 420 aa1.7□□□□□ -2.14
ECHDC1-201ENST00000368287 ADIGQ0VDE8 80 aa1.7□□□□□ -2.14
ECHDC1-201ENST00000368287 BTN1A1Q13410 526 aa1.7□□□□□ -2.14
ECHDC1-201ENST00000368287 PMVKQ15126 192 aa1.7□□□□□ -2.14
ECHDC1-201ENST00000368287 HNRNPA1L2Q32P51 320 aaKnown RBP1.7□□□□□ -2.14
ECHDC1-201ENST00000368287 TTC32Q5I0X7 151 aa1.7□□□□□ -2.14
ECHDC1-201ENST00000368287 PRR14LQ5THK1 2151 aa1.7□□□□□ -2.14
ECHDC1-201ENST00000368287 BRD3OSQ6XYD6 125 aa1.7□□□□□ -2.14
ECHDC1-201ENST00000368287 SETD3Q86TU7 594 aaPredicted RBP1.7□□□□□ -2.14
ECHDC1-201ENST00000368287 LRP11Q86VZ4 500 aa1.7□□□□□ -2.14
ECHDC1-201ENST00000368287 OR4K2Q8NGD2 314 aa1.7□□□□□ -2.14
ECHDC1-201ENST00000368287 OR52K1Q8NGK4 314 aa1.7□□□□□ -2.14
ECHDC1-201ENST00000368287 FAM57AQ8TBR7 257 aa1.7□□□□□ -2.14
ECHDC1-201ENST00000368287 FAM131CQ96AQ9 280 aa1.7□□□□□ -2.14
ECHDC1-201ENST00000368287 FXYD5Q96DB9 178 aa1.7□□□□□ -2.14
ECHDC1-201ENST00000368287 SPACA5Q96QH8 159 aa1.7□□□□□ -2.14
ECHDC1-201ENST00000368287 SHANK2-AS3Q9BTD1 123 aa1.7□□□□□ -2.14
ECHDC1-201ENST00000368287 BEX2Q9BXY8 128 aa1.7□□□□□ -2.14
ECHDC1-201ENST00000368287 ORC6Q9Y5N6 252 aa1.7□□□□□ -2.14
ECHDC1-201ENST00000368287 A0A0G2JMP0 313 aa1.69□□□□□ -2.14
ECHDC1-201ENST00000368287 A0A0X1KG70 313 aa1.69□□□□□ -2.14
ECHDC1-201ENST00000368287 KIR2DS1A0A191URI9 304 aa1.69□□□□□ -2.14
ECHDC1-201ENST00000368287 M0R1B8 84 aa1.69□□□□□ -2.14
ECHDC1-201ENST00000368287 RFXANKO14593 260 aa1.69□□□□□ -2.14
ECHDC1-201ENST00000368287 HOXB8P17481 243 aaPredicted RBP1.69□□□□□ -2.14
ECHDC1-201ENST00000368287 PTNP21246 168 aa1.69□□□□□ -2.14
ECHDC1-201ENST00000368287 CD34P28906 385 aa1.69□□□□□ -2.14
ECHDC1-201ENST00000368287 MPV17P39210 176 aa1.69□□□□□ -2.14
ECHDC1-201ENST00000368287 P2RY2P41231 377 aa1.69□□□□□ -2.14
ECHDC1-201ENST00000368287 TGM4P49221 684 aa1.69□□□□□ -2.14
ECHDC1-201ENST00000368287 C2orf54Q08AI8 447 aa1.69□□□□□ -2.14
ECHDC1-201ENST00000368287 LINC00303Q3SY05 128 aa1.69□□□□□ -2.14
ECHDC1-201ENST00000368287 FBXL19-AS1Q494R0 122 aa1.69□□□□□ -2.14
ECHDC1-201ENST00000368287 ITPRIPQ8IWB1 547 aa1.69□□□□□ -2.14
ECHDC1-201ENST00000368287 SGPP2Q8IWX5 399 aa1.69□□□□□ -2.14
ECHDC1-201ENST00000368287 C1orf64Q8NEQ6 169 aa1.69□□□□□ -2.14
ECHDC1-201ENST00000368287 TSNAXQ99598 290 aaKnown RBP1.69□□□□□ -2.14
ECHDC1-201ENST00000368287 C1orf50Q9BV19 199 aa1.69□□□□□ -2.14
ECHDC1-201ENST00000368287 TM6SF2Q9BZW4 377 aa1.69□□□□□ -2.14
ECHDC1-201ENST00000368287 ANKHQ9HCJ1 492 aa1.69□□□□□ -2.14
ECHDC1-201ENST00000368287 LZTFL1Q9NQ48 299 aa1.69□□□□□ -2.14
ECHDC1-201ENST00000368287 STMN3Q9NZ72 180 aa1.69□□□□□ -2.14
ECHDC1-201ENST00000368287 TFR2Q9UP52 801 aa1.69□□□□□ -2.14
ECHDC1-201ENST00000368287 KLF13Q9Y2Y9 288 aaPredicted RBP1.69□□□□□ -2.14
ECHDC1-201ENST00000368287 V9GYY9 64 aa1.69□□□□□ -2.14
ECHDC1-201ENST00000368287 JCADQ9P266 1359 aa1.69□□□□□ -2.14
ECHDC1-201ENST00000368287 SDK2Q58EX2 2172 aa1.68□□□□□ -2.14
ECHDC1-201ENST00000368287 A0A0J9YYE9 177 aa1.68□□□□□ -2.14
ECHDC1-201ENST00000368287 ANKRD20A5PA0PJZ0 165 aa1.68□□□□□ -2.14
ECHDC1-201ENST00000368287 SEC14L6B5MCN3 397 aa1.68□□□□□ -2.14
ECHDC1-201ENST00000368287 BOLA2-SMG1P6H3BVE0 249 aa1.68□□□□□ -2.14
ECHDC1-201ENST00000368287 SC5DO75845 299 aa1.68□□□□□ -2.14
ECHDC1-201ENST00000368287 FSTL3O95633 263 aa1.68□□□□□ -2.14
ECHDC1-201ENST00000368287 TRBC1P01850 177 aa1.68□□□□□ -2.14
ECHDC1-201ENST00000368287 OR5AL1P0C617 328 aa1.68□□□□□ -2.14
ECHDC1-201ENST00000368287 OR5AC1P0C628 307 aa1.68□□□□□ -2.14
ECHDC1-201ENST00000368287 COL8A2P25067 703 aa1.68□□□□□ -2.14
ECHDC1-201ENST00000368287 PRKCDQ05655 676 aa1.68□□□□□ -2.14
ECHDC1-201ENST00000368287 MEF2CQ06413 473 aaPredicted RBP1.68□□□□□ -2.14
ECHDC1-201ENST00000368287 LAMTOR4Q0VGL1 99 aa1.68□□□□□ -2.14
ECHDC1-201ENST00000368287 ZFP62Q8NB50 900 aaPredicted RBP1.68□□□□□ -2.14
ECHDC1-201ENST00000368287 ZNF680Q8NEM1 530 aa1.68□□□□□ -2.14
ECHDC1-201ENST00000368287 OR13C9Q8NGT0 318 aa1.68□□□□□ -2.14
ECHDC1-201ENST00000368287 MITD1Q8WV92 249 aa1.68□□□□□ -2.14
ECHDC1-201ENST00000368287 ITLN2Q8WWU7 325 aaPredicted RBP1.68□□□□□ -2.14
ECHDC1-201ENST00000368287 LRRC39Q96DD0 335 aa1.68□□□□□ -2.14
ECHDC1-201ENST00000368287 YIPF6Q96EC8 236 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms