RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 SULF2Q8IWU5 870 aa17.3■□□□□ 0.36
TRIM58-201ENST00000366481 SGPP2Q8IWX5 399 aa17.3■□□□□ 0.36
TRIM58-201ENST00000366481 LMAN1LQ9HAT1 526 aa17.3■□□□□ 0.36
TRIM58-201ENST00000366481 LRP4O75096 1905 aa17.3■□□□□ 0.36
TRIM58-201ENST00000366481 CDAP32320 146 aa17.3■□□□□ 0.36
TRIM58-201ENST00000366481 AFF3P51826 1226 aaKnown RBP17.3■□□□□ 0.36
TRIM58-201ENST00000366481 Q7L0L9 218 aa17.3■□□□□ 0.36
TRIM58-201ENST00000366481 ALG1L2C9J202 215 aa17.3■□□□□ 0.36
TRIM58-201ENST00000366481 NPIPA5E9PKD4 350 aa17.3■□□□□ 0.36
TRIM58-201ENST00000366481 SLC31A2O15432 143 aa17.3■□□□□ 0.36
TRIM58-201ENST00000366481 TSPAN2O60636 221 aa17.3■□□□□ 0.36
TRIM58-201ENST00000366481 ZNF205O95201 554 aa17.3■□□□□ 0.36
TRIM58-201ENST00000366481 TRGC2P03986 189 aa17.3■□□□□ 0.36
TRIM58-201ENST00000366481 HEXBP07686 556 aa17.3■□□□□ 0.36
TRIM58-201ENST00000366481 JMJD7P0C870 316 aa17.3■□□□□ 0.36
TRIM58-201ENST00000366481 CFPP27918 469 aa17.3■□□□□ 0.36
TRIM58-201ENST00000366481 FAM180AQ6UWF9 173 aa17.3■□□□□ 0.36
TRIM58-201ENST00000366481 SLC26A10Q8NG04 563 aa17.3■□□□□ 0.36
TRIM58-201ENST00000366481 OR51E1Q8TCB6 317 aa17.3■□□□□ 0.36
TRIM58-201ENST00000366481 ADAMTS18Q8TE60 1221 aa17.3■□□□□ 0.36
TRIM58-201ENST00000366481 PTX4Q96A99 478 aa17.3■□□□□ 0.36
TRIM58-201ENST00000366481 SDHAF3Q9NRP4 125 aa17.3■□□□□ 0.36
TRIM58-201ENST00000366481 NPIPA1Q9UND3 350 aa17.3■□□□□ 0.36
TRIM58-201ENST00000366481 SLC5A6Q9Y289 635 aa17.3■□□□□ 0.36
TRIM58-201ENST00000366481 IGHV1OR15-9A0A0B4J2B8 117 aa17.29■□□□□ 0.36
TRIM58-201ENST00000366481 IFITM10A6NMD0 228 aa17.29■□□□□ 0.36
TRIM58-201ENST00000366481 KLK2P20151 261 aa17.29■□□□□ 0.36
TRIM58-201ENST00000366481 CCR5P51681 352 aa17.29■□□□□ 0.36
TRIM58-201ENST00000366481 ROM1Q03395 351 aa17.29■□□□□ 0.36
TRIM58-201ENST00000366481 HEPN1Q6WQI6 88 aa17.29■□□□□ 0.36
TRIM58-201ENST00000366481 ABHD12BQ7Z5M8 362 aaPredicted RBP17.29■□□□□ 0.36
TRIM58-201ENST00000366481 FER1L5A0AVI2 2057 aa17.29■□□□□ 0.36
TRIM58-201ENST00000366481 ARGFXA6NJG6 315 aa17.29■□□□□ 0.36
TRIM58-201ENST00000366481 A8MVM7 634 aa17.29■□□□□ 0.36
TRIM58-201ENST00000366481 SCGNO76038 276 aa17.29■□□□□ 0.36
TRIM58-201ENST00000366481 IFI6P09912 130 aa17.29■□□□□ 0.36
TRIM58-201ENST00000366481 HIST1H1DP16402 221 aaKnown RBP17.29■□□□□ 0.36
TRIM58-201ENST00000366481 OR3A4PP47883 348 aa17.29■□□□□ 0.36
TRIM58-201ENST00000366481 SLC6A8P48029 635 aa17.29■□□□□ 0.36
TRIM58-201ENST00000366481 POLR2HP52434 150 aaKnown RBP17.29■□□□□ 0.36
TRIM58-201ENST00000366481 CASP6P55212 293 aa17.29■□□□□ 0.36
TRIM58-201ENST00000366481 FAM3AP98173 230 aa17.29■□□□□ 0.36
TRIM58-201ENST00000366481 PLAC9Q5JTB6 97 aa17.29■□□□□ 0.36
TRIM58-201ENST00000366481 MRPL24Q96A35 216 aaKnown RBP17.29■□□□□ 0.36
TRIM58-201ENST00000366481 SMOC1Q9H4F8 434 aa17.29■□□□□ 0.36
TRIM58-201ENST00000366481 SEC14L6B5MCN3 397 aa17.28■□□□□ 0.36
TRIM58-201ENST00000366481 SLC33A1O00400 549 aaPredicted RBP17.28■□□□□ 0.36
TRIM58-201ENST00000366481 HIST1H1BP16401 226 aaKnown RBP17.28■□□□□ 0.36
TRIM58-201ENST00000366481 OMGP23515 440 aa17.28■□□□□ 0.36
TRIM58-201ENST00000366481 PMELP40967 661 aa17.28■□□□□ 0.36
TRIM58-201ENST00000366481 NAXEQ8NCW5 288 aa17.28■□□□□ 0.36
TRIM58-201ENST00000366481 DAZLQ92904 295 aaKnown RBP17.28■□□□□ 0.36
TRIM58-201ENST00000366481 REEP6Q96HR9 211 aa17.28■□□□□ 0.36
TRIM58-201ENST00000366481 C8orf33Q9H7E9 229 aaPredicted RBP17.28■□□□□ 0.36
TRIM58-201ENST00000366481 B3GALT1Q9Y5Z6 326 aa17.28■□□□□ 0.36
TRIM58-201ENST00000366481 IGKV3D-11A0A0A0MRZ8 115 aa17.28■□□□□ 0.36
TRIM58-201ENST00000366481 TGIF2-C20orf24A0A0A6YYL0 155 aa17.28■□□□□ 0.36
TRIM58-201ENST00000366481 ZNF705GA8MUZ8 300 aaPredicted RBP17.28■□□□□ 0.36
TRIM58-201ENST00000366481 TERTO14746 1132 aaKnown RBP17.28■□□□□ 0.36
TRIM58-201ENST00000366481 ZNF217O75362 1048 aa17.28■□□□□ 0.36
TRIM58-201ENST00000366481 CHRM2P08172 466 aa17.28■□□□□ 0.36
TRIM58-201ENST00000366481 HSD11B1P28845 292 aa17.28■□□□□ 0.36
TRIM58-201ENST00000366481 CRABP1P29762 137 aa17.28■□□□□ 0.36
TRIM58-201ENST00000366481 CHAF1BQ13112 559 aa17.28■□□□□ 0.36
TRIM58-201ENST00000366481 ZNF239Q16600 458 aaKnown RBP17.28■□□□□ 0.36
TRIM58-201ENST00000366481 GGNBP1Q5YKI7 109 aa17.28■□□□□ 0.36
TRIM58-201ENST00000366481 FAM86C1Q9NVL1 165 aa17.28■□□□□ 0.36
TRIM58-201ENST00000366481 A0A087WZY1 265 aa17.28■□□□□ 0.36
TRIM58-201ENST00000366481 RAD51DO75771 328 aa17.28■□□□□ 0.36
TRIM58-201ENST00000366481 GUSBP08236 651 aa17.28■□□□□ 0.36
TRIM58-201ENST00000366481 TLE3Q04726 772 aa17.28■□□□□ 0.36
TRIM58-201ENST00000366481 SPEM2Q0P670 501 aa17.28■□□□□ 0.36
TRIM58-201ENST00000366481 REC114Q7Z4M0 266 aa17.28■□□□□ 0.36
TRIM58-201ENST00000366481 LPAR5Q9H1C0 372 aa17.28■□□□□ 0.36
TRIM58-201ENST00000366481 G6PC2Q9NQR9 355 aa17.28■□□□□ 0.36
TRIM58-201ENST00000366481 FRYQ5TBA9 3013 aa17.28■□□□□ 0.36
TRIM58-201ENST00000366481 EP300Q09472 2414 aaPredicted RBP17.27■□□□□ 0.36
TRIM58-201ENST00000366481 CDRT15L2A8MXV6 281 aa17.27■□□□□ 0.36
TRIM58-201ENST00000366481 H3BQ15 152 aa17.27■□□□□ 0.36
TRIM58-201ENST00000366481 MPZP25189 248 aa17.27■□□□□ 0.36
TRIM58-201ENST00000366481 G0S2P27469 103 aa17.27■□□□□ 0.36
TRIM58-201ENST00000366481 BLVRBP30043 206 aaPredicted RBP17.27■□□□□ 0.36
TRIM58-201ENST00000366481 KHDC3LQ587J8 217 aa17.27■□□□□ 0.36
TRIM58-201ENST00000366481 ZFP62Q8NB50 900 aaPredicted RBP17.27■□□□□ 0.36
TRIM58-201ENST00000366481 URM1Q9BTM9 101 aaKnown RBP17.27■□□□□ 0.36
TRIM58-201ENST00000366481 PRDM13Q9H4Q3 707 aa17.27■□□□□ 0.36
TRIM58-201ENST00000366481 A0A1W2PNR3 127 aa17.27■□□□□ 0.36
TRIM58-201ENST00000366481 MS4A18H0YCH9 400 aa17.27■□□□□ 0.36
TRIM58-201ENST00000366481 ATXN7O15265 892 aaPredicted RBP17.27■□□□□ 0.36
TRIM58-201ENST00000366481 BIDP55957 195 aa17.27■□□□□ 0.36
TRIM58-201ENST00000366481 SLC26A5P58743 744 aa17.27■□□□□ 0.36
TRIM58-201ENST00000366481 FXYD4P59646 89 aa17.27■□□□□ 0.36
TRIM58-201ENST00000366481 MFAP5Q13361 173 aa17.27■□□□□ 0.36
TRIM58-201ENST00000366481 MS4A18Q3C1V0 323 aa17.27■□□□□ 0.36
TRIM58-201ENST00000366481 BEND4Q6ZU67 534 aa17.27■□□□□ 0.36
TRIM58-201ENST00000366481 SMRP1Q8NCR6 262 aa17.27■□□□□ 0.36
TRIM58-201ENST00000366481 RAB39BQ96DA2 213 aa17.27■□□□□ 0.36
TRIM58-201ENST00000366481 GNRHR2Q96P88 292 aa17.27■□□□□ 0.36
TRIM58-201ENST00000366481 WASF3Q9UPY6 502 aa17.27■□□□□ 0.36
TRIM58-201ENST00000366481 SMCO3A2RU48 225 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms