RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 PLCXD3Q63HM9 321 aa17.04■□□□□ 0.32
CD47-202ENST00000361309 TRPM8Q7Z2W7 1104 aa17.04■□□□□ 0.32
CD47-202ENST00000361309 KRT77Q7Z794 578 aa17.04■□□□□ 0.32
CD47-202ENST00000361309 COMMD2Q86X83 199 aa17.04■□□□□ 0.32
CD47-202ENST00000361309 OR5M11Q96RB7 305 aa17.04■□□□□ 0.32
CD47-202ENST00000361309 CDCA4Q9BXL8 241 aa17.04■□□□□ 0.32
CD47-202ENST00000361309 C1orf21Q9H246 121 aa17.04■□□□□ 0.32
CD47-202ENST00000361309 MAGIXQ9H6Y5 334 aa17.04■□□□□ 0.32
CD47-202ENST00000361309 A0A0U1RQV5 110 aa17.03■□□□□ 0.32
CD47-202ENST00000361309 A6NDX4 124 aa17.03■□□□□ 0.32
CD47-202ENST00000361309 SYNGR1O43759 233 aa17.03■□□□□ 0.32
CD47-202ENST00000361309 SNX3O60493 162 aa17.03■□□□□ 0.32
CD47-202ENST00000361309 PEX14O75381 377 aa17.03■□□□□ 0.32
CD47-202ENST00000361309 HCCSP53701 268 aa17.03■□□□□ 0.32
CD47-202ENST00000361309 RIPPLY1Q0D2K3 151 aa17.03■□□□□ 0.32
CD47-202ENST00000361309 RPS4Y2Q8TD47 263 aa17.03■□□□□ 0.32
CD47-202ENST00000361309 FEVQ99581 238 aa17.03■□□□□ 0.32
CD47-202ENST00000361309 PRSS22Q9GZN4 317 aa17.03■□□□□ 0.32
CD47-202ENST00000361309 ABCB10Q9NRK6 738 aa17.03■□□□□ 0.32
CD47-202ENST00000361309 FAM206AQ9NX38 181 aa17.03■□□□□ 0.32
CD47-202ENST00000361309 LAMP5Q9UJQ1 280 aa17.03■□□□□ 0.32
CD47-202ENST00000361309 TMEM269A0A1B0GVZ9 245 aa17.02■□□□□ 0.32
CD47-202ENST00000361309 PSMD9O00233 223 aa17.02■□□□□ 0.32
CD47-202ENST00000361309 GSC2O15499 205 aa17.02■□□□□ 0.32
CD47-202ENST00000361309 ARG1P05089 322 aa17.02■□□□□ 0.32
CD47-202ENST00000361309 PGA5P0DJD9 388 aa17.02■□□□□ 0.32
CD47-202ENST00000361309 PIPP12273 146 aaPredicted RBP17.02■□□□□ 0.32
CD47-202ENST00000361309 FAHP16930 419 aa17.02■□□□□ 0.32
CD47-202ENST00000361309 ALOX5APP20292 161 aa17.02■□□□□ 0.32
CD47-202ENST00000361309 GINS1Q14691 196 aa17.02■□□□□ 0.32
CD47-202ENST00000361309 Q6ZS46 218 aa17.02■□□□□ 0.32
CD47-202ENST00000361309 CALHM1Q8IU99 346 aa17.02■□□□□ 0.32
CD47-202ENST00000361309 CPOQ8IVL8 374 aa17.02■□□□□ 0.32
CD47-202ENST00000361309 OR51E1Q8TCB6 317 aa17.02■□□□□ 0.32
CD47-202ENST00000361309 WNT10AQ9GZT5 417 aa17.02■□□□□ 0.32
CD47-202ENST00000361309 GPR84Q9NQS5 396 aa17.02■□□□□ 0.32
CD47-202ENST00000361309 NDE1Q9NXR1 346 aa17.02■□□□□ 0.32
CD47-202ENST00000361309 PIGLQ9Y2B2 252 aa17.02■□□□□ 0.32
CD47-202ENST00000361309 TBL2Q9Y4P3 447 aaKnown RBP17.02■□□□□ 0.32
CD47-202ENST00000361309 ACOD1A6NK06 481 aa17.01■□□□□ 0.31
CD47-202ENST00000361309 C17orf98A8MV24 154 aa17.01■□□□□ 0.31
CD47-202ENST00000361309 PRODHO43272 600 aa17.01■□□□□ 0.31
CD47-202ENST00000361309 MPIG6BO95866 241 aa17.01■□□□□ 0.31
CD47-202ENST00000361309 TK1P04183 234 aa17.01■□□□□ 0.31
CD47-202ENST00000361309 ATP6V1B1P15313 513 aa17.01■□□□□ 0.31
CD47-202ENST00000361309 IGLL1P15814 213 aa17.01■□□□□ 0.31
CD47-202ENST00000361309 DLX6P56179 175 aa17.01■□□□□ 0.31
CD47-202ENST00000361309 SSX2Q16385 188 aa17.01■□□□□ 0.31
CD47-202ENST00000361309 ARSJQ5FYB0 599 aaPredicted RBP17.01■□□□□ 0.31
CD47-202ENST00000361309 LDLRAD2Q5SZI1 272 aa17.01■□□□□ 0.31
CD47-202ENST00000361309 BATF2Q8N1L9 274 aa17.01■□□□□ 0.31
CD47-202ENST00000361309 BBS1Q8NFJ9 593 aa17.01■□□□□ 0.31
CD47-202ENST00000361309 GIPC3Q8TF64 312 aa17.01■□□□□ 0.31
CD47-202ENST00000361309 ITFG2Q969R8 447 aa17.01■□□□□ 0.31
CD47-202ENST00000361309 FOXRED1Q96CU9 486 aaPredicted RBP17.01■□□□□ 0.31
CD47-202ENST00000361309 MALSU1Q96EH3 234 aa17.01■□□□□ 0.31
CD47-202ENST00000361309 OR8B4Q96RC9 309 aa17.01■□□□□ 0.31
CD47-202ENST00000361309 PBOV1Q9GZY1 135 aa17.01■□□□□ 0.31
CD47-202ENST00000361309 OR14J1Q9UGF5 321 aa17.01■□□□□ 0.31
CD47-202ENST00000361309 PITPNC1Q9UKF7 332 aa17.01■□□□□ 0.31
CD47-202ENST00000361309 ODF3BA8MYP8 253 aa17■□□□□ 0.31
CD47-202ENST00000361309 J3QT63 122 aa17■□□□□ 0.31
CD47-202ENST00000361309 NXPH2O95156 264 aa17■□□□□ 0.31
CD47-202ENST00000361309 NRASP01111 189 aa17■□□□□ 0.31
CD47-202ENST00000361309 IGLV3-1P01715 115 aa17■□□□□ 0.31
CD47-202ENST00000361309 CD33P20138 364 aa17■□□□□ 0.31
CD47-202ENST00000361309 HAAOP46952 286 aa17■□□□□ 0.31
CD47-202ENST00000361309 RPS7P62081 194 aaKnown RBP17■□□□□ 0.31
CD47-202ENST00000361309 FAM98BQ52LJ0 330 aaKnown RBP17■□□□□ 0.31
CD47-202ENST00000361309 SLC35D3Q5M8T2 416 aa17■□□□□ 0.31
CD47-202ENST00000361309 ZNF684Q5T5D7 378 aa17■□□□□ 0.31
CD47-202ENST00000361309 OR13D1Q8NGV5 346 aa17■□□□□ 0.31
CD47-202ENST00000361309 TEAD3Q99594 435 aa17■□□□□ 0.31
CD47-202ENST00000361309 MED4Q9NPJ6 270 aa17■□□□□ 0.31
CD47-202ENST00000361309 ENPP5Q9UJA9 477 aa17■□□□□ 0.31
CD47-202ENST00000361309 A0A1W2PRX2 142 aa16.99■□□□□ 0.31
CD47-202ENST00000361309 NOS1APO75052 506 aaPredicted RBP16.99■□□□□ 0.31
CD47-202ENST00000361309 BLCAPP62952 87 aa16.99■□□□□ 0.31
CD47-202ENST00000361309 TMEM95Q3KNT9 176 aa16.99■□□□□ 0.31
CD47-202ENST00000361309 VAX1Q5SQQ9 334 aa16.99■□□□□ 0.31
CD47-202ENST00000361309 LCN8Q6JVE9 175 aa16.99■□□□□ 0.31
CD47-202ENST00000361309 KCTD18Q6PI47 426 aaPredicted RBP16.99■□□□□ 0.31
CD47-202ENST00000361309 DHFR2Q86XF0 187 aa16.99■□□□□ 0.31
CD47-202ENST00000361309 ZNF573Q86YE8 665 aa16.99■□□□□ 0.31
CD47-202ENST00000361309 NRIP2Q9BQI9 281 aa16.99■□□□□ 0.31
CD47-202ENST00000361309 MEX3AA1L020 520 aaKnown RBP16.98■□□□□ 0.31
CD47-202ENST00000361309 HMGN1P05114 100 aa16.98■□□□□ 0.31
CD47-202ENST00000361309 JUNBP17275 347 aaPredicted RBP16.98■□□□□ 0.31
CD47-202ENST00000361309 SLC2A5P22732 501 aa16.98■□□□□ 0.31
CD47-202ENST00000361309 VDAC2P45880 294 aaPredicted RBP16.98■□□□□ 0.31
CD47-202ENST00000361309 ZNF626Q68DY1 528 aa16.98■□□□□ 0.31
CD47-202ENST00000361309 DEGS2Q6QHC5 323 aa16.98■□□□□ 0.31
CD47-202ENST00000361309 WFDC9Q8NEX5 89 aa16.98■□□□□ 0.31
CD47-202ENST00000361309 MROQ9BYG7 248 aa16.98■□□□□ 0.31
CD47-202ENST00000361309 YIPF3Q9GZM5 350 aa16.98■□□□□ 0.31
CD47-202ENST00000361309 HES4Q9HCC6 221 aa16.98■□□□□ 0.31
CD47-202ENST00000361309 GPR173Q9NS66 373 aa16.98■□□□□ 0.31
CD47-202ENST00000361309 POLDIP2Q9Y2S7 368 aa16.98■□□□□ 0.31
CD47-202ENST00000361309 PRR32B1ATL7 298 aa16.97■□□□□ 0.31
CD47-202ENST00000361309 K7N7A8 449 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms