RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 CD80P33681 288 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 CEACAM16Q2WEN9 425 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 B9D1Q9UPM9 204 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 ALG1L2C9J202 215 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 IGLV3-27P01718 113 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 APEHP13798 732 aaKnown RBP8.69□□□□□ -1.02
CUX1-203ENST00000360264 OPRK1P41145 380 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 LINC00596Q86U02 117 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 TMEM99Q8N816 258 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 OR4C3Q8NH37 302 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 WSB2Q9NYS7 404 aaPredicted RBP8.69□□□□□ -1.02
CUX1-203ENST00000360264 OR5V1Q9UGF6 321 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 ABCA2Q9BZC7 2435 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 ZNF17P17021 662 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 POLR2IP36954 125 aaKnown RBP8.69□□□□□ -1.02
CUX1-203ENST00000360264 CDK5R1Q15078 307 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 DYNLRB2Q8TF09 96 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 FAM103A1Q9BTL3 118 aaKnown RBP8.69□□□□□ -1.02
CUX1-203ENST00000360264 DCAF16Q9NXF7 216 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 FPR2P25090 351 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 MPLP40238 635 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 HTRA4P83105 476 aaPredicted RBP8.69□□□□□ -1.02
CUX1-203ENST00000360264 ALKBH6Q3KRA9 238 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 ASCL5Q7RTU5 278 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 OR2G2Q8NGZ5 317 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 TXNDC12O95881 172 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 A0A087WUJ7 227 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 PIAS2O75928 621 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 GNG4P50150 75 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 FGF14Q92915 247 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 AMDHD2Q9Y303 409 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 KCNMB2Q9Y691 235 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 LBHQ53QV2 105 aaPredicted RBP8.69□□□□□ -1.02
CUX1-203ENST00000360264 NECAP1Q8NC96 275 aa8.69□□□□□ -1.02
CUX1-203ENST00000360264 C4orf45Q96LM5 186 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 LTB4R2Q9NPC1 389 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 CEACAM6P40199 344 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 ZNF816Q0VGE8 651 aaPredicted RBP8.68□□□□□ -1.02
CUX1-203ENST00000360264 PJVKQ0ZLH3 352 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 ADGRL4Q9HBW9 690 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 FGF17O60258 216 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 ACP1P24666 158 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 CCKARP32238 428 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 ISL1P61371 349 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 PRR27Q6MZM9 219 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 DEGS2Q6QHC5 323 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 NPAS1Q99742 590 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 CHST2Q9Y4C5 530 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 PLCH1Q4KWH8 1693 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 RREB1Q92766 1687 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 MRPL58Q14197 206 aaKnown RBP8.68□□□□□ -1.02
CUX1-203ENST00000360264 ARRDC1-AS1Q9H2J1 176 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 PRSS44E7EML9 344 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 KCNK15Q9H427 330 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 MBD1Q9UIS9 605 aaPredicted RBP8.68□□□□□ -1.02
CUX1-203ENST00000360264 HSPB8Q9UJY1 196 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 PCSK6P29122 969 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 MPGP29372 298 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 COX19Q49B96 90 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 COL13A1Q5TAT6 717 aaPredicted RBP8.68□□□□□ -1.02
CUX1-203ENST00000360264 NKAIN4Q8IVV8 208 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 SIGLEC11Q96RL6 698 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 FOXQ1Q9C009 403 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 MPC1Q9Y5U8 109 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 HMGA1P17096 107 aaKnown RBP8.68□□□□□ -1.02
CUX1-203ENST00000360264 GALR1P47211 349 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 ZNF260Q3ZCT1 412 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 OR2B11Q5JQS5 317 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 TUSC5Q8IXB3 177 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 OR1L4Q8NGR5 311 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 TMEM167BQ9NRX6 74 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 TMEM202A6NGA9 273 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 GSTZ1O43708 216 aaPredicted RBP8.68□□□□□ -1.02
CUX1-203ENST00000360264 DEDDO75618 318 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 PAQR6Q6TCH4 344 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 MAVSQ7Z434 540 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 SF3B5Q9BWJ5 86 aaKnown RBP8.68□□□□□ -1.02
CUX1-203ENST00000360264 NIT2Q9NQR4 276 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 RPS4Y1P22090 263 aaKnown RBP8.68□□□□□ -1.02
CUX1-203ENST00000360264 ZNF154Q13106 437 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 SH2D2AQ9NP31 389 aa8.68□□□□□ -1.02
CUX1-203ENST00000360264 FITM1A5D6W6 292 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 SEMA7AO75326 666 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 SLC2A10O95528 541 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 HIST1H1EP10412 219 aaKnown RBP8.67□□□□□ -1.02
CUX1-203ENST00000360264 WDR31Q8NA23 367 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 CBY1Q9Y3M2 126 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 ZAR1LA6NP61 321 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 F2RL2O00254 374 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 SULT1A2P50226 295 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 CCSMST1Q4G0I0 132 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 CGB2Q6NT52 195 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 PRSS45Q7RTY3 260 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 SLC22A13Q9Y226 551 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 EXOSC2Q13868 293 aaKnown RBP8.67□□□□□ -1.02
CUX1-203ENST00000360264 AHDC1Q5TGY3 1603 aaPredicted RBP8.67□□□□□ -1.02
CUX1-203ENST00000360264 COL11A1P12107 1806 aaPredicted RBP8.67□□□□□ -1.02
CUX1-203ENST00000360264 A0A1W2PPQ1 181 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 KRASP01116 189 aa8.67□□□□□ -1.02
CUX1-203ENST00000360264 EMDP50402 254 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms