RNA–Protein interactions for RNA: ENST00000359175.8

SPTSSB-201, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSB, Length 3,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-201ENST00000359175 FOXK1P85037 733 aa11.71□□□□□ -0.53
SPTSSB-201ENST00000359175 ZNF266Q14584 549 aa11.71□□□□□ -0.53
SPTSSB-201ENST00000359175 ZNF66Q6ZN08 573 aa11.71□□□□□ -0.53
SPTSSB-201ENST00000359175 VN1R4Q7Z5H5 301 aa11.71□□□□□ -0.53
SPTSSB-201ENST00000359175 CACUL1Q86Y37 369 aa11.71□□□□□ -0.53
SPTSSB-201ENST00000359175 ALKBH3Q96Q83 286 aaPredicted RBP11.71□□□□□ -0.53
SPTSSB-201ENST00000359175 MIEN1Q9BRT3 115 aa11.71□□□□□ -0.53
SPTSSB-201ENST00000359175 ABHD6Q9BV23 337 aa11.71□□□□□ -0.53
SPTSSB-201ENST00000359175 SDF2L1Q9HCN8 221 aa11.71□□□□□ -0.53
SPTSSB-201ENST00000359175 AURKAIP1Q9NWT8 199 aaPredicted RBP11.71□□□□□ -0.53
SPTSSB-201ENST00000359175 EHFQ9NZC4 300 aa11.71□□□□□ -0.53
SPTSSB-201ENST00000359175 EMC9Q9Y3B6 208 aa11.71□□□□□ -0.53
SPTSSB-201ENST00000359175 OR1A2Q9Y585 309 aa11.71□□□□□ -0.53
SPTSSB-201ENST00000359175 GOLGA4Q13439 2230 aaKnown RBP11.71□□□□□ -0.54
SPTSSB-201ENST00000359175 SCN2AQ99250 2005 aa11.71□□□□□ -0.54
SPTSSB-201ENST00000359175 CRYM-AS1A6NIL9 109 aa11.71□□□□□ -0.54
SPTSSB-201ENST00000359175 SOCS1O15524 211 aa11.71□□□□□ -0.54
SPTSSB-201ENST00000359175 EFEMP2O95967 443 aa11.71□□□□□ -0.54
SPTSSB-201ENST00000359175 CT62P0C5K7 136 aa11.71□□□□□ -0.54
SPTSSB-201ENST00000359175 GALNSP34059 522 aa11.71□□□□□ -0.54
SPTSSB-201ENST00000359175 TMEM241Q24JQ0 296 aa11.71□□□□□ -0.54
SPTSSB-201ENST00000359175 MARCH3Q86UD3 253 aa11.71□□□□□ -0.54
SPTSSB-201ENST00000359175 ARHGEF39Q8N4T4 335 aa11.71□□□□□ -0.54
SPTSSB-201ENST00000359175 C20orf144Q9BQM9 153 aa11.71□□□□□ -0.54
SPTSSB-201ENST00000359175 COL4A6Q14031 1691 aa11.7□□□□□ -0.54
SPTSSB-201ENST00000359175 LOC102723971A0A1B0GUV8 181 aa11.7□□□□□ -0.54
SPTSSB-201ENST00000359175 XRCC2O43543 280 aa11.7□□□□□ -0.54
SPTSSB-201ENST00000359175 PFN1P07737 140 aaKnown RBP11.7□□□□□ -0.54
SPTSSB-201ENST00000359175 UMODP07911 640 aa11.7□□□□□ -0.54
SPTSSB-201ENST00000359175 CSNK1A1P48729 337 aa11.7□□□□□ -0.54
SPTSSB-201ENST00000359175 TMEM50BP56557 158 aa11.7□□□□□ -0.54
SPTSSB-201ENST00000359175 PSG6Q00889 435 aa11.7□□□□□ -0.54
SPTSSB-201ENST00000359175 SQSTM1Q13501 440 aa11.7□□□□□ -0.54
SPTSSB-201ENST00000359175 GBGT1Q8N5D6 347 aa11.7□□□□□ -0.54
SPTSSB-201ENST00000359175 CTHRC1Q96CG8 243 aa11.7□□□□□ -0.54
SPTSSB-201ENST00000359175 ELOVL1Q9BW60 279 aa11.7□□□□□ -0.54
SPTSSB-201ENST00000359175 HSF4Q9ULV5 492 aa11.7□□□□□ -0.54
SPTSSB-201ENST00000359175 COL4A2P08572 1712 aa11.7□□□□□ -0.54
SPTSSB-201ENST00000359175 CCL25O15444 150 aa11.7□□□□□ -0.54
SPTSSB-201ENST00000359175 HCRTR2O43614 444 aa11.7□□□□□ -0.54
SPTSSB-201ENST00000359175 OR6A2O95222 327 aa11.7□□□□□ -0.54
SPTSSB-201ENST00000359175 HBE1P02100 147 aa11.7□□□□□ -0.54
SPTSSB-201ENST00000359175 CTSDP07339 412 aaPredicted RBP11.7□□□□□ -0.54
SPTSSB-201ENST00000359175 PNMTP11086 282 aa11.7□□□□□ -0.54
SPTSSB-201ENST00000359175 RAB7AP51149 207 aa11.7□□□□□ -0.54
SPTSSB-201ENST00000359175 ZP2Q05996 745 aa11.7□□□□□ -0.54
SPTSSB-201ENST00000359175 COL5A1-AS1Q5SY13 56 aa11.7□□□□□ -0.54
SPTSSB-201ENST00000359175 ZNF100Q8IYN0 542 aa11.7□□□□□ -0.54
SPTSSB-201ENST00000359175 AGBL5Q8NDL9 886 aa11.7□□□□□ -0.54
SPTSSB-201ENST00000359175 NT5CQ8TCD5 201 aa11.7□□□□□ -0.54
SPTSSB-201ENST00000359175 SPPL3Q8TCT6 385 aa11.7□□□□□ -0.54
SPTSSB-201ENST00000359175 FOXJ2Q9P0K8 574 aa11.7□□□□□ -0.54
SPTSSB-201ENST00000359175 UTRNP46939 3433 aa11.7□□□□□ -0.54
SPTSSB-201ENST00000359175 FGF17O60258 216 aa11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 AHSA1O95433 338 aa11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 CSTAP01040 98 aa11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 SMIM10L1P0DMW3 83 aa11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 RAC2P15153 192 aa11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 TFPI2P48307 235 aa11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 CSNK2A1P68400 391 aaPredicted RBP11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 CDK3Q00526 305 aa11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 TIPARPQ7Z3E1 657 aaKnown RBP11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 FBXL14Q8N1E6 418 aa11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 CSNK2A3Q8NEV1 391 aa11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 OR52N5Q8NH56 324 aa11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 OR14L1PQ8NHC6 308 aa11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 SMIM10Q96HG1 83 aa11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 RFNGQ9Y644 331 aa11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 MPDZO75970 2070 aa11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 B3GALT2O43825 422 aa11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 DDNO94850 711 aaPredicted RBP11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 BCKDHBP21953 392 aa11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 CMPK1P30085 196 aa11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 PEBP1P30086 187 aaKnown RBP11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 METAP1P53582 386 aa11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 SNU13P55769 128 aaKnown RBP11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 VAMP2P63027 116 aa11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 PRDX4Q13162 271 aa11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 ATG4DQ86TL0 474 aaPredicted RBP11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 SULF2Q8IWU5 870 aa11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 SLC24A4Q8NFF2 622 aa11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 OR4N2Q8NGD1 307 aa11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 LMF2Q9BU23 707 aaKnown RBP11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 TRBV11-1A0A0K0K1C0 115 aa11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 C20orf202A1L168 122 aa11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 IFNL4K9M1U5 179 aa11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 KLF8O95600 359 aaPredicted RBP11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 PTTG1IPP53801 180 aa11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 KLF3P57682 345 aaPredicted RBP11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 FAM3BP58499 235 aaPredicted RBP11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 EWSR1Q01844 656 aaKnown RBP eCLIP11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 SPRED2Q7Z698 418 aa11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 MRGPRDQ8TDS7 321 aa11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 FOXN4Q96NZ1 517 aa11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 ST6GALNAC5Q9BVH7 336 aa11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 TMEM74BQ9NUR3 256 aa11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 MRPS23Q9Y3D9 190 aaKnown RBP11.69□□□□□ -0.54
SPTSSB-201ENST00000359175 ST8SIA3O43173 380 aa11.68□□□□□ -0.54
SPTSSB-201ENST00000359175 BGLAPP02818 100 aa11.68□□□□□ -0.54
SPTSSB-201ENST00000359175 CST5P28325 142 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms