RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 ASCL4Q6XD76 172 aa15.47■□□□□ 0.07
SMARCD3-202ENST00000356800 FAM46BQ96A09 425 aa15.47■□□□□ 0.07
SMARCD3-202ENST00000356800 HIST1H2AAQ96QV6 131 aa15.47■□□□□ 0.07
SMARCD3-202ENST00000356800 SYT3Q9BQG1 590 aa15.47■□□□□ 0.07
SMARCD3-202ENST00000356800 ADAT1Q9BUB4 502 aaKnown RBP15.47■□□□□ 0.07
SMARCD3-202ENST00000356800 MRPL37Q9BZE1 423 aaKnown RBP15.47■□□□□ 0.07
SMARCD3-202ENST00000356800 CA10Q9NS85 328 aa15.47■□□□□ 0.07
SMARCD3-202ENST00000356800 TMEM100Q9NV29 134 aa15.47■□□□□ 0.07
SMARCD3-202ENST00000356800 ING4Q9UNL4 249 aa15.47■□□□□ 0.07
SMARCD3-202ENST00000356800 IGKV1-12A0A0C4DH73 117 aa15.46■□□□□ 0.07
SMARCD3-202ENST00000356800 RAB27BO00194 218 aa15.46■□□□□ 0.07
SMARCD3-202ENST00000356800 CDC14BO60729 498 aa15.46■□□□□ 0.07
SMARCD3-202ENST00000356800 IGKV1D-12P01611 117 aa15.46■□□□□ 0.07
SMARCD3-202ENST00000356800 TMEM225BP0DP42 221 aa15.46■□□□□ 0.07
SMARCD3-202ENST00000356800 INPP1P49441 399 aa15.46■□□□□ 0.07
SMARCD3-202ENST00000356800 KLF3P57682 345 aaPredicted RBP15.46■□□□□ 0.07
SMARCD3-202ENST00000356800 PDZK1IP1Q13113 114 aa15.46■□□□□ 0.07
SMARCD3-202ENST00000356800 SLC22A6Q4U2R8 563 aa15.46■□□□□ 0.07
SMARCD3-202ENST00000356800 WDR86Q86TI4 376 aa15.46■□□□□ 0.07
SMARCD3-202ENST00000356800 OR10K1Q8NGX5 313 aa15.46■□□□□ 0.07
SMARCD3-202ENST00000356800 GTF3AQ92664 365 aaKnown RBP15.46■□□□□ 0.07
SMARCD3-202ENST00000356800 COX4I2Q96KJ9 171 aa15.46■□□□□ 0.07
SMARCD3-202ENST00000356800 S100A13Q99584 98 aa15.46■□□□□ 0.07
SMARCD3-202ENST00000356800 MSL2Q9HCI7 577 aa15.46■□□□□ 0.07
SMARCD3-202ENST00000356800 RBMX2Q9Y388 322 aaKnown RBP15.46■□□□□ 0.07
SMARCD3-202ENST00000356800 ATP23Q9Y6H3 246 aa15.46■□□□□ 0.07
SMARCD3-202ENST00000356800 ROS1P08922 2347 aa15.46■□□□□ 0.07
SMARCD3-202ENST00000356800 FLNCQ14315 2725 aa15.45■□□□□ 0.06
SMARCD3-202ENST00000356800 TRAV18A0A075B6X5 111 aa15.45■□□□□ 0.06
SMARCD3-202ENST00000356800 OR5B21A6NL26 309 aa15.45■□□□□ 0.06
SMARCD3-202ENST00000356800 PYCARD-AS1I3L0S3 204 aa15.45■□□□□ 0.06
SMARCD3-202ENST00000356800 CHRM2P08172 466 aa15.45■□□□□ 0.06
SMARCD3-202ENST00000356800 LOXP28300 417 aaPredicted RBP15.45■□□□□ 0.06
SMARCD3-202ENST00000356800 GNG3P63215 75 aa15.45■□□□□ 0.06
SMARCD3-202ENST00000356800 OR8G1Q15617 311 aa15.45■□□□□ 0.06
SMARCD3-202ENST00000356800 GDPD3Q7L5L3 318 aa15.45■□□□□ 0.06
SMARCD3-202ENST00000356800 PXT1Q8NFP0 134 aa15.45■□□□□ 0.06
SMARCD3-202ENST00000356800 OR10AD1Q8NGE0 317 aa15.45■□□□□ 0.06
SMARCD3-202ENST00000356800 OR8S1Q8NH09 359 aa15.45■□□□□ 0.06
SMARCD3-202ENST00000356800 FCAMRQ8WWV6 532 aa15.45■□□□□ 0.06
SMARCD3-202ENST00000356800 GAL3ST1Q99999 423 aa15.45■□□□□ 0.06
SMARCD3-202ENST00000356800 TMEM59Q9BXS4 323 aa15.45■□□□□ 0.06
SMARCD3-202ENST00000356800 LPAR5Q9H1C0 372 aa15.45■□□□□ 0.06
SMARCD3-202ENST00000356800 BANF2Q9H503 90 aa15.45■□□□□ 0.06
SMARCD3-202ENST00000356800 ZNF442Q9H7R0 627 aa15.45■□□□□ 0.06
SMARCD3-202ENST00000356800 DEFB108AA8MXU0 73 aa15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 ZNF780AO75290 641 aaPredicted RBP15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 CRTAPO75718 401 aaPredicted RBP15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 MPIG6BO95866 241 aa15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 CD3GP09693 182 aa15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 HAAOP46952 286 aa15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 GPR176Q14439 515 aa15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 ADIPOQQ15848 244 aa15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 ZNF611Q8N823 705 aa15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 ZSCAN4Q8NAM6 433 aaPredicted RBP15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 OR52I2Q8NH67 350 aa15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 NEUROG1Q92886 237 aa15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 MRPL24Q96A35 216 aaKnown RBP15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 RTL8AQ9BWD3 113 aa15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 C11orf54Q9H0W9 315 aaPredicted RBP15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 METTL9Q9H1A3 318 aa15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 OR51I2Q9H344 312 aa15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 IL36GQ9NZH8 169 aa15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 RALYQ9UKM9 306 aaKnown RBP15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 CHD6Q8TD26 2715 aa15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 C19orf84I3L1E1 186 aa15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 PLAUP00749 431 aa15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 CD3EP07766 207 aa15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 RFX2P48378 723 aa15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 RPS27AP62979 156 aaKnown RBP15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 MOGAT2Q3SYC2 334 aa15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 BEX5Q5H9J7 111 aa15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 FAM76BQ5HYJ3 339 aa15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 ZNF57Q68EA5 555 aaPredicted RBP15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 SLC25A26Q70HW3 274 aa15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 FAM89BQ8N5H3 189 aa15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 ACBD4Q8NC06 268 aa15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 HS3ST6Q96QI5 342 aa15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 MICU1Q9BPX6 476 aa15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 URM1Q9BTM9 101 aaKnown RBP15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 TM2D1Q9BX74 207 aa15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 SLC22A4Q9H015 551 aa15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 AUNIPQ9H7T9 357 aa15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 ELL3Q9HB65 397 aaPredicted RBP15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 NOP16Q9Y3C1 178 aaKnown RBP15.44■□□□□ 0.06
SMARCD3-202ENST00000356800 CHD3Q12873 2000 aaKnown RBP15.43■□□□□ 0.06
SMARCD3-202ENST00000356800 LINC00854A0A1B0GVQ3 168 aa15.43■□□□□ 0.06
SMARCD3-202ENST00000356800 ZSCAN5BA6NJL1 495 aa15.43■□□□□ 0.06
SMARCD3-202ENST00000356800 E7EQL1 145 aa15.43■□□□□ 0.06
SMARCD3-202ENST00000356800 F5H5P2 479 aa15.43■□□□□ 0.06
SMARCD3-202ENST00000356800 SULT1C2O00338 296 aa15.43■□□□□ 0.06
SMARCD3-202ENST00000356800 ORC5O43913 435 aa15.43■□□□□ 0.06
SMARCD3-202ENST00000356800 RNF224P0DH78 156 aa15.43■□□□□ 0.06
SMARCD3-202ENST00000356800 SERPINA2P20848 420 aa15.43■□□□□ 0.06
SMARCD3-202ENST00000356800 TOMM5Q8N4H5 51 aa15.43■□□□□ 0.06
SMARCD3-202ENST00000356800 OR13G1Q8NGZ3 307 aa15.43■□□□□ 0.06
SMARCD3-202ENST00000356800 OR51F2Q8NH61 342 aa15.43■□□□□ 0.06
SMARCD3-202ENST00000356800 GCDHQ92947 438 aaPredicted RBP15.43■□□□□ 0.06
SMARCD3-202ENST00000356800 TAAR3PQ9P1P4 343 aa15.43■□□□□ 0.06
SMARCD3-202ENST00000356800 A0A0A6YYD4 124 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms