RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 CD55P08174 381 aa13.87□□□□□ -0.19
RTN3-205ENST00000356000 GZMHP20718 246 aa13.87□□□□□ -0.19
RTN3-205ENST00000356000 TPTE2P1Q5T6R2 138 aa13.87□□□□□ -0.19
RTN3-205ENST00000356000 LHFPL1Q86WI0 220 aa13.87□□□□□ -0.19
RTN3-205ENST00000356000 OR2G3Q8NGZ4 309 aa13.87□□□□□ -0.19
RTN3-205ENST00000356000 WFDC5Q8TCV5 224 aa13.87□□□□□ -0.19
RTN3-205ENST00000356000 DNAJA3Q96EY1 480 aa13.87□□□□□ -0.19
RTN3-205ENST00000356000 IL17FQ96PD4 163 aa13.87□□□□□ -0.19
RTN3-205ENST00000356000 SDF2Q99470 211 aa13.87□□□□□ -0.19
RTN3-205ENST00000356000 ZNF700Q9H0M5 742 aa13.87□□□□□ -0.19
RTN3-205ENST00000356000 MAGT1Q9H0U3 335 aa13.87□□□□□ -0.19
RTN3-205ENST00000356000 ELL3Q9HB65 397 aaPredicted RBP13.87□□□□□ -0.19
RTN3-205ENST00000356000 ZNF581Q9P0T4 197 aa13.87□□□□□ -0.19
RTN3-205ENST00000356000 AK3Q9UIJ7 227 aa13.87□□□□□ -0.19
RTN3-205ENST00000356000 PADI3Q9ULW8 664 aa13.87□□□□□ -0.19
RTN3-205ENST00000356000 DHDHQ9UQ10 334 aa13.87□□□□□ -0.19
RTN3-205ENST00000356000 GNB3P16520 340 aa13.86□□□□□ -0.19
RTN3-205ENST00000356000 ZNF43P17038 809 aa13.86□□□□□ -0.19
RTN3-205ENST00000356000 ALOX5APP20292 161 aa13.86□□□□□ -0.19
RTN3-205ENST00000356000 GLRA1P23415 457 aa13.86□□□□□ -0.19
RTN3-205ENST00000356000 FGF8P55075 233 aaPredicted RBP13.86□□□□□ -0.19
RTN3-205ENST00000356000 CDK3Q00526 305 aa13.86□□□□□ -0.19
RTN3-205ENST00000356000 LRRC73Q5JTD7 316 aa13.86□□□□□ -0.19
RTN3-205ENST00000356000 ZFP62Q8NB50 900 aaPredicted RBP13.86□□□□□ -0.19
RTN3-205ENST00000356000 COX11Q9Y6N1 276 aa13.86□□□□□ -0.19
RTN3-205ENST00000356000 CLEC18AA5D8T8 446 aa13.86□□□□□ -0.19
RTN3-205ENST00000356000 CDKN2AP42771 156 aaKnown RBP13.86□□□□□ -0.19
RTN3-205ENST00000356000 REEP5Q00765 189 aa13.86□□□□□ -0.19
RTN3-205ENST00000356000 WDR25Q64LD2 544 aaPredicted RBP13.86□□□□□ -0.19
RTN3-205ENST00000356000 ZNF619Q8N2I2 560 aa13.86□□□□□ -0.19
RTN3-205ENST00000356000 CLEC18CQ8NCF0 446 aa13.86□□□□□ -0.19
RTN3-205ENST00000356000 ZNF738Q8NE65 137 aa13.86□□□□□ -0.19
RTN3-205ENST00000356000 OR4C5Q8NGB2 326 aa13.86□□□□□ -0.19
RTN3-205ENST00000356000 PTPMT1Q8WUK0 201 aaPredicted RBP13.86□□□□□ -0.19
RTN3-205ENST00000356000 ASB5Q8WWX0 329 aa13.86□□□□□ -0.19
RTN3-205ENST00000356000 WBP2Q969T9 261 aa13.86□□□□□ -0.19
RTN3-205ENST00000356000 TSSK2Q96PF2 358 aa13.86□□□□□ -0.19
RTN3-205ENST00000356000 TMEM106BQ9NUM4 274 aa13.86□□□□□ -0.19
RTN3-205ENST00000356000 CES1P1Q9UKY3 287 aa13.86□□□□□ -0.19
RTN3-205ENST00000356000 SLC7A11Q9UPY5 501 aa13.86□□□□□ -0.19
RTN3-205ENST00000356000 PAM16Q9Y3D7 125 aa13.86□□□□□ -0.19
RTN3-205ENST00000356000 HEATR5BQ9P2D3 2071 aa13.86□□□□□ -0.19
RTN3-205ENST00000356000 LOC102723971A0A1B0GUV8 181 aa13.85□□□□□ -0.19
RTN3-205ENST00000356000 A6NJY4 79 aa13.85□□□□□ -0.19
RTN3-205ENST00000356000 SCGB1D2O95969 90 aa13.85□□□□□ -0.19
RTN3-205ENST00000356000 NBEAP1P0C6P0 100 aa13.85□□□□□ -0.19
RTN3-205ENST00000356000 LYPD6Q86Y78 171 aa13.85□□□□□ -0.19
RTN3-205ENST00000356000 OR4D6Q8NGJ1 314 aa13.85□□□□□ -0.19
RTN3-205ENST00000356000 OR10S1Q8NGN2 331 aa13.85□□□□□ -0.19
RTN3-205ENST00000356000 CLUHP3Q96NS8 147 aa13.85□□□□□ -0.19
RTN3-205ENST00000356000 PCBD2Q9H0N5 130 aa13.85□□□□□ -0.19
RTN3-205ENST00000356000 HIPK2Q9H2X6 1198 aa13.85□□□□□ -0.19
RTN3-205ENST00000356000 ZNF552Q9H707 407 aaPredicted RBP13.85□□□□□ -0.19
RTN3-205ENST00000356000 RHBDD3Q9Y3P4 386 aa13.85□□□□□ -0.19
RTN3-205ENST00000356000 SPTBP11277 2137 aa13.85□□□□□ -0.19
RTN3-205ENST00000356000 CCDC163A0A0D9SF12 145 aa13.85□□□□□ -0.19
RTN3-205ENST00000356000 A0A1B0GWA3 101 aa13.85□□□□□ -0.19
RTN3-205ENST00000356000 FAM230AA0A1W2PPH8 454 aa13.85□□□□□ -0.19
RTN3-205ENST00000356000 F6UZH7 168 aa13.85□□□□□ -0.19
RTN3-205ENST00000356000 MMP9P14780 707 aa13.85□□□□□ -0.19
RTN3-205ENST00000356000 APOBEC3AP31941 199 aaPredicted RBP13.85□□□□□ -0.19
RTN3-205ENST00000356000 RBMXP38159 391 aaKnown RBP13.85□□□□□ -0.19
RTN3-205ENST00000356000 ZNF41P51814 821 aaPredicted RBP13.85□□□□□ -0.19
RTN3-205ENST00000356000 CNN1P51911 297 aaKnown RBP13.85□□□□□ -0.19
RTN3-205ENST00000356000 PRSS8Q16651 343 aa13.85□□□□□ -0.19
RTN3-205ENST00000356000 MORN2Q502X0 79 aa13.85□□□□□ -0.19
RTN3-205ENST00000356000 SPRED2Q7Z698 418 aa13.85□□□□□ -0.19
RTN3-205ENST00000356000 OR51G1Q8NGK1 321 aa13.85□□□□□ -0.19
RTN3-205ENST00000356000 VAMP8Q9BV40 100 aa13.85□□□□□ -0.19
RTN3-205ENST00000356000 AICDAQ9GZX7 198 aa13.85□□□□□ -0.19
RTN3-205ENST00000356000 WDR76Q9H967 626 aa13.85□□□□□ -0.19
RTN3-205ENST00000356000 ANKUB1A6NFN9 424 aa13.84□□□□□ -0.19
RTN3-205ENST00000356000 SYNGR4O95473 234 aa13.84□□□□□ -0.19
RTN3-205ENST00000356000 PSMB5P28074 263 aa13.84□□□□□ -0.19
RTN3-205ENST00000356000 EFNA3P52797 238 aa13.84□□□□□ -0.19
RTN3-205ENST00000356000 PLAURQ03405 335 aa13.84□□□□□ -0.19
RTN3-205ENST00000356000 FBLN7Q53RD9 439 aa13.84□□□□□ -0.19
RTN3-205ENST00000356000 SLC48A1Q6P1K1 146 aa13.84□□□□□ -0.19
RTN3-205ENST00000356000 DEFB128Q7Z7B8 93 aa13.84□□□□□ -0.19
RTN3-205ENST00000356000 OR2I1PQ8NGU4 316 aa13.84□□□□□ -0.19
RTN3-205ENST00000356000 THAP3Q8WTV1 239 aaPredicted RBP13.84□□□□□ -0.19
RTN3-205ENST00000356000 GPR84Q9NQS5 396 aa13.84□□□□□ -0.19
RTN3-205ENST00000356000 SLC22A13Q9Y226 551 aa13.84□□□□□ -0.19
RTN3-205ENST00000356000 RFNGQ9Y644 331 aa13.84□□□□□ -0.19
RTN3-205ENST00000356000 C17orf102A2RUQ5 167 aa13.84□□□□□ -0.19
RTN3-205ENST00000356000 ATP6V0CP27449 155 aa13.84□□□□□ -0.19
RTN3-205ENST00000356000 RAB11AP62491 216 aa13.84□□□□□ -0.19
RTN3-205ENST00000356000 CEBPEQ15744 281 aa13.84□□□□□ -0.19
RTN3-205ENST00000356000 OCIAD2Q56VL3 154 aa13.84□□□□□ -0.19
RTN3-205ENST00000356000 C1QL3Q5VWW1 255 aa13.84□□□□□ -0.19
RTN3-205ENST00000356000 HSD11B1LQ7Z5J1 315 aa13.84□□□□□ -0.19
RTN3-205ENST00000356000 C17orf78Q8N4C9 275 aa13.84□□□□□ -0.19
RTN3-205ENST00000356000 IL22RA1Q8N6P7 574 aa13.84□□□□□ -0.19
RTN3-205ENST00000356000 OR13G1Q8NGZ3 307 aa13.84□□□□□ -0.19
RTN3-205ENST00000356000 TOMM40LQ969M1 308 aa13.84□□□□□ -0.19
RTN3-205ENST00000356000 ZNF681Q96N22 645 aa13.84□□□□□ -0.19
RTN3-205ENST00000356000 OR8B4Q96RC9 309 aa13.84□□□□□ -0.19
RTN3-205ENST00000356000 TAC3Q9UHF0 121 aa13.84□□□□□ -0.19
RTN3-205ENST00000356000 C4orf47A7E2U8 309 aa13.83□□□□□ -0.19
RTN3-205ENST00000356000 COCHO43405 550 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms