RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 PLPP3O14495 311 aa16.05■□□□□ 0.16
COL18A1-202ENST00000355480 MDH2P40926 338 aaKnown RBP16.05■□□□□ 0.16
COL18A1-202ENST00000355480 FAM162BQ5T6X4 162 aa16.05■□□□□ 0.16
COL18A1-202ENST00000355480 BCL2L2Q92843 193 aaPredicted RBP16.05■□□□□ 0.16
COL18A1-202ENST00000355480 RAB1CQ92928 201 aa16.05■□□□□ 0.16
COL18A1-202ENST00000355480 ZG16BQ96DA0 208 aa16.05■□□□□ 0.16
COL18A1-202ENST00000355480 TMEM272A0A1B0GTI8 110 aa16.05■□□□□ 0.16
COL18A1-202ENST00000355480 CT62P0C5K7 136 aa16.05■□□□□ 0.16
COL18A1-202ENST00000355480 LPAR6P43657 344 aa16.05■□□□□ 0.16
COL18A1-202ENST00000355480 LRRTM1Q86UE6 522 aa16.05■□□□□ 0.16
COL18A1-202ENST00000355480 C4orf45Q96LM5 186 aa16.05■□□□□ 0.16
COL18A1-202ENST00000355480 SRRQ9GZT4 340 aa16.05■□□□□ 0.16
COL18A1-202ENST00000355480 AMMECR1Q9Y4X0 333 aaPredicted RBP16.05■□□□□ 0.16
COL18A1-202ENST00000355480 TMEM267Q0VDI3 215 aaPredicted RBP16.05■□□□□ 0.16
COL18A1-202ENST00000355480 OR4F17Q8NGA8 305 aa16.05■□□□□ 0.16
COL18A1-202ENST00000355480 PRR7Q8TB68 274 aa16.05■□□□□ 0.16
COL18A1-202ENST00000355480 APOBEC4Q8WW27 367 aaKnown RBP16.05■□□□□ 0.16
COL18A1-202ENST00000355480 COX14Q96I36 57 aa16.05■□□□□ 0.16
COL18A1-202ENST00000355480 GPR87Q9BY21 358 aa16.05■□□□□ 0.16
COL18A1-202ENST00000355480 ZNF586Q9NXT0 402 aa16.05■□□□□ 0.16
COL18A1-202ENST00000355480 RP1L1Q8IWN7 2480 aaPredicted RBP16.05■□□□□ 0.16
COL18A1-202ENST00000355480 KCNJ3P48549 501 aa16.05■□□□□ 0.16
COL18A1-202ENST00000355480 NPEPL1Q8NDH3 523 aa16.05■□□□□ 0.16
COL18A1-202ENST00000355480 OR2Y1Q8NGV0 311 aa16.05■□□□□ 0.16
COL18A1-202ENST00000355480 TMPRSS13Q9BYE2 586 aa16.05■□□□□ 0.16
COL18A1-202ENST00000355480 IL36GQ9NZH8 169 aa16.05■□□□□ 0.16
COL18A1-202ENST00000355480 LSM2Q9Y333 95 aaKnown RBP16.05■□□□□ 0.16
COL18A1-202ENST00000355480 A0A1W2PPQ1 181 aa16.04■□□□□ 0.16
COL18A1-202ENST00000355480 ZNF320A2RRD8 509 aa16.04■□□□□ 0.16
COL18A1-202ENST00000355480 BCL2L11O43521 198 aa16.04■□□□□ 0.16
COL18A1-202ENST00000355480 ERVFC1-1P60608 527 aa16.04■□□□□ 0.16
COL18A1-202ENST00000355480 CBLN3Q6UW01 205 aa16.04■□□□□ 0.16
COL18A1-202ENST00000355480 ZNF574Q6ZN55 896 aaPredicted RBP16.04■□□□□ 0.16
COL18A1-202ENST00000355480 BHLHA9Q7RTU4 235 aa16.04■□□□□ 0.16
COL18A1-202ENST00000355480 SLC24A4Q8NFF2 622 aa16.04■□□□□ 0.16
COL18A1-202ENST00000355480 WDR34Q96EX3 536 aa16.04■□□□□ 0.16
COL18A1-202ENST00000355480 SIRT5Q9NXA8 310 aa16.04■□□□□ 0.16
COL18A1-202ENST00000355480 GLI3P10071 1580 aa16.04■□□□□ 0.16
COL18A1-202ENST00000355480 ADAM20O43506 726 aa16.04■□□□□ 0.16
COL18A1-202ENST00000355480 BHLHA15Q7RTS1 189 aaPredicted RBP16.04■□□□□ 0.16
COL18A1-202ENST00000355480 C6orf201Q7Z4U5 140 aa16.04■□□□□ 0.16
COL18A1-202ENST00000355480 CXXC4Q9H2H0 198 aa16.04■□□□□ 0.16
COL18A1-202ENST00000355480 RAB18Q9NP72 206 aa16.04■□□□□ 0.16
COL18A1-202ENST00000355480 UQCC1Q9NVA1 299 aa16.04■□□□□ 0.16
COL18A1-202ENST00000355480 SOX15O60248 233 aa16.04■□□□□ 0.16
COL18A1-202ENST00000355480 S100A8P05109 93 aa16.04■□□□□ 0.16
COL18A1-202ENST00000355480 KIAA0040Q15053 153 aa16.04■□□□□ 0.16
COL18A1-202ENST00000355480 C4orf17Q53FE4 359 aa16.04■□□□□ 0.16
COL18A1-202ENST00000355480 ETFRF1Q6IPR1 90 aa16.04■□□□□ 0.16
COL18A1-202ENST00000355480 ICMTO60725 284 aa16.04■□□□□ 0.16
COL18A1-202ENST00000355480 CCL4P13236 92 aa16.04■□□□□ 0.16
COL18A1-202ENST00000355480 CEACAM3P40198 252 aa16.04■□□□□ 0.16
COL18A1-202ENST00000355480 OR2B8PP59922 312 aa16.04■□□□□ 0.16
COL18A1-202ENST00000355480 FAM3AP98173 230 aa16.04■□□□□ 0.16
COL18A1-202ENST00000355480 TRIM77I1YAP6 450 aa16.03■□□□□ 0.16
COL18A1-202ENST00000355480 FGF2P09038 288 aa16.03■□□□□ 0.16
COL18A1-202ENST00000355480 CDKN2AP42771 156 aaKnown RBP16.03■□□□□ 0.16
COL18A1-202ENST00000355480 ZNF141Q15928 474 aa16.03■□□□□ 0.16
COL18A1-202ENST00000355480 DEGS2Q6QHC5 323 aa16.03■□□□□ 0.16
COL18A1-202ENST00000355480 OR6S1Q8NH40 331 aa16.03■□□□□ 0.16
COL18A1-202ENST00000355480 ASB13Q8WXK3 278 aa16.03■□□□□ 0.16
COL18A1-202ENST00000355480 A0A1W2PRD5 423 aa16.03■□□□□ 0.16
COL18A1-202ENST00000355480 A0A1W2PRF3 423 aa16.03■□□□□ 0.16
COL18A1-202ENST00000355480 A0A1W2PRM7 423 aa16.03■□□□□ 0.16
COL18A1-202ENST00000355480 ZFPL1O95159 310 aa16.03■□□□□ 0.16
COL18A1-202ENST00000355480 C1orf53Q5VUE5 145 aa16.03■□□□□ 0.16
COL18A1-202ENST00000355480 MRGPRDQ8TDS7 321 aa16.03■□□□□ 0.16
COL18A1-202ENST00000355480 OR2D2Q9H210 308 aa16.03■□□□□ 0.16
COL18A1-202ENST00000355480 SLC17A5Q9NRA2 495 aa16.03■□□□□ 0.16
COL18A1-202ENST00000355480 TTC3P53804 2025 aa16.03■□□□□ 0.16
COL18A1-202ENST00000355480 CDX4O14627 284 aaPredicted RBP16.03■□□□□ 0.16
COL18A1-202ENST00000355480 NHLRC1Q6VVB1 395 aa16.03■□□□□ 0.16
COL18A1-202ENST00000355480 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.03■□□□□ 0.16
COL18A1-202ENST00000355480 TCAPO15273 167 aa16.03■□□□□ 0.16
COL18A1-202ENST00000355480 SNCGO76070 127 aa16.03■□□□□ 0.16
COL18A1-202ENST00000355480 PTHLHP12272 177 aa16.03■□□□□ 0.16
COL18A1-202ENST00000355480 SLC37A1P57057 533 aa16.03■□□□□ 0.16
COL18A1-202ENST00000355480 TMEM65Q6PI78 240 aa16.03■□□□□ 0.16
COL18A1-202ENST00000355480 RND1Q92730 232 aa16.03■□□□□ 0.16
COL18A1-202ENST00000355480 NHSQ6T4R5 1651 aa16.03■□□□□ 0.16
COL18A1-202ENST00000355480 C3AR1Q16581 482 aa16.03■□□□□ 0.16
COL18A1-202ENST00000355480 ZNF683Q8IZ20 524 aa16.03■□□□□ 0.16
COL18A1-202ENST00000355480 ST8SIA2Q92186 375 aa16.03■□□□□ 0.16
COL18A1-202ENST00000355480 ZDHHC11Q9H8X9 412 aa16.03■□□□□ 0.16
COL18A1-202ENST00000355480 DNASE2O00115 360 aaPredicted RBP16.02■□□□□ 0.16
COL18A1-202ENST00000355480 SIGLEC14Q08ET2 396 aa16.02■□□□□ 0.16
COL18A1-202ENST00000355480 C11orf42Q8N5U0 333 aa16.02■□□□□ 0.16
COL18A1-202ENST00000355480 SEBOXQ9HB31 216 aaPredicted RBP16.02■□□□□ 0.16
COL18A1-202ENST00000355480 TMEFF2Q9UIK5 374 aaPredicted RBP16.02■□□□□ 0.16
COL18A1-202ENST00000355480 SLC16A12Q6ZSM3 486 aa16.02■□□□□ 0.16
COL18A1-202ENST00000355480 SSX7Q7RTT5 188 aa16.02■□□□□ 0.16
COL18A1-202ENST00000355480 GLRX2Q9NS18 164 aa16.02■□□□□ 0.16
COL18A1-202ENST00000355480 AMDHD2Q9Y303 409 aa16.02■□□□□ 0.16
COL18A1-202ENST00000355480 F5P12259 2224 aa16.02■□□□□ 0.16
COL18A1-202ENST00000355480 LAMB1P07942 1786 aa16.02■□□□□ 0.16
COL18A1-202ENST00000355480 MPZL1O95297 269 aa16.02■□□□□ 0.15
COL18A1-202ENST00000355480 IGHV3-13P01766 116 aa16.02■□□□□ 0.15
COL18A1-202ENST00000355480 IGHV3-7P01780 117 aa16.02■□□□□ 0.15
COL18A1-202ENST00000355480 SPP1P10451 314 aa16.02■□□□□ 0.15
COL18A1-202ENST00000355480 CALCRP30988 508 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms