RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 AKAP11Q9UKA4 1901 aa11.77□□□□□ -0.53
SCN8A-202ENST00000355133 A0A1W2PPQ1 181 aa11.77□□□□□ -0.53
SCN8A-202ENST00000355133 MASP2O00187 686 aa11.77□□□□□ -0.53
SCN8A-202ENST00000355133 BCL2L11O43521 198 aa11.77□□□□□ -0.53
SCN8A-202ENST00000355133 SRP14P37108 136 aaKnown RBP11.77□□□□□ -0.53
SCN8A-202ENST00000355133 PAPPA2Q9BXP8 1791 aa11.77□□□□□ -0.53
SCN8A-202ENST00000355133 ADAM20O43506 726 aa11.77□□□□□ -0.53
SCN8A-202ENST00000355133 TBX19O60806 448 aa11.77□□□□□ -0.53
SCN8A-202ENST00000355133 ZFPL1O95159 310 aa11.77□□□□□ -0.53
SCN8A-202ENST00000355133 HIST1H1DP16402 221 aaKnown RBP11.77□□□□□ -0.53
SCN8A-202ENST00000355133 FPR2P25090 351 aa11.77□□□□□ -0.53
SCN8A-202ENST00000355133 SLC37A1P57057 533 aa11.77□□□□□ -0.53
SCN8A-202ENST00000355133 TIGD3Q6B0B8 471 aa11.77□□□□□ -0.53
SCN8A-202ENST00000355133 OCEL1Q9H607 264 aa11.77□□□□□ -0.53
SCN8A-202ENST00000355133 DUS4LO95620 317 aaKnown RBP11.76□□□□□ -0.53
SCN8A-202ENST00000355133 CCL4P13236 92 aa11.76□□□□□ -0.53
SCN8A-202ENST00000355133 ACSM6Q6P461 480 aa11.76□□□□□ -0.53
SCN8A-202ENST00000355133 OR2W3Q7Z3T1 314 aa11.76□□□□□ -0.53
SCN8A-202ENST00000355133 ARRDC1Q8N5I2 433 aa11.76□□□□□ -0.53
SCN8A-202ENST00000355133 ST8SIA2Q92186 375 aa11.76□□□□□ -0.53
SCN8A-202ENST00000355133 COX14Q96I36 57 aa11.76□□□□□ -0.53
SCN8A-202ENST00000355133 C4orf45Q96LM5 186 aa11.76□□□□□ -0.53
SCN8A-202ENST00000355133 TREM2Q9NZC2 230 aa11.76□□□□□ -0.53
SCN8A-202ENST00000355133 NHSQ6T4R5 1651 aa11.76□□□□□ -0.53
SCN8A-202ENST00000355133 TMEM211Q6ICI0 200 aa11.76□□□□□ -0.53
SCN8A-202ENST00000355133 MOGAT1Q96PD6 335 aa11.76□□□□□ -0.53
SCN8A-202ENST00000355133 LRRC3CA6NJW4 275 aa11.76□□□□□ -0.53
SCN8A-202ENST00000355133 FBP1P09467 338 aa11.76□□□□□ -0.53
SCN8A-202ENST00000355133 ZNF528Q3MIS6 628 aa11.76□□□□□ -0.53
SCN8A-202ENST00000355133 JMJD6Q6NYC1 403 aaPredicted RBP11.76□□□□□ -0.53
SCN8A-202ENST00000355133 KIAA1958Q8N8K9 716 aa11.76□□□□□ -0.53
SCN8A-202ENST00000355133 SLC24A4Q8NFF2 622 aa11.76□□□□□ -0.53
SCN8A-202ENST00000355133 OR6S1Q8NH40 331 aa11.76□□□□□ -0.53
SCN8A-202ENST00000355133 MRGPRDQ8TDS7 321 aa11.76□□□□□ -0.53
SCN8A-202ENST00000355133 CLEC5AQ9NY25 188 aa11.76□□□□□ -0.53
SCN8A-202ENST00000355133 TRIM77I1YAP6 450 aa11.75□□□□□ -0.53
SCN8A-202ENST00000355133 HRASP01112 189 aa11.75□□□□□ -0.53
SCN8A-202ENST00000355133 ERVFC1-1P60608 527 aa11.75□□□□□ -0.53
SCN8A-202ENST00000355133 SSX7Q7RTT5 188 aa11.75□□□□□ -0.53
SCN8A-202ENST00000355133 OR2D2Q9H210 308 aa11.75□□□□□ -0.53
SCN8A-202ENST00000355133 COL22A1Q8NFW1 1626 aaPredicted RBP11.75□□□□□ -0.53
SCN8A-202ENST00000355133 FER1L6Q2WGJ9 1857 aa11.75□□□□□ -0.53
SCN8A-202ENST00000355133 OPN1MWP04001 364 aa11.75□□□□□ -0.53
SCN8A-202ENST00000355133 OPN1MW2P0DN77 364 aa11.75□□□□□ -0.53
SCN8A-202ENST00000355133 OPN1MW3P0DN78 364 aa11.75□□□□□ -0.53
SCN8A-202ENST00000355133 RHBDD2Q6NTF9 364 aa11.75□□□□□ -0.53
SCN8A-202ENST00000355133 UQCC2Q9BRT2 126 aa11.75□□□□□ -0.53
SCN8A-202ENST00000355133 AAMDCQ9H7C9 122 aa11.75□□□□□ -0.53
SCN8A-202ENST00000355133 NIT2Q9NQR4 276 aa11.75□□□□□ -0.53
SCN8A-202ENST00000355133 ECM29Q5VYK3 1845 aa11.75□□□□□ -0.53
SCN8A-202ENST00000355133 CTLA4P16410 223 aa11.75□□□□□ -0.53
SCN8A-202ENST00000355133 THSD4Q6ZMP0 1018 aa11.75□□□□□ -0.53
SCN8A-202ENST00000355133 WDR34Q96EX3 536 aa11.75□□□□□ -0.53
SCN8A-202ENST00000355133 LSM2Q9Y333 95 aaKnown RBP11.75□□□□□ -0.53
SCN8A-202ENST00000355133 TTC3P53804 2025 aa11.75□□□□□ -0.53
SCN8A-202ENST00000355133 MYH14Q7Z406 1995 aaKnown RBP11.75□□□□□ -0.53
SCN8A-202ENST00000355133 TCAPO15273 167 aa11.75□□□□□ -0.53
SCN8A-202ENST00000355133 CALCRP30988 508 aa11.75□□□□□ -0.53
SCN8A-202ENST00000355133 SLC16A12Q6ZSM3 486 aa11.75□□□□□ -0.53
SCN8A-202ENST00000355133 C11orf42Q8N5U0 333 aa11.75□□□□□ -0.53
SCN8A-202ENST00000355133 SCN7AQ01118 1682 aa11.75□□□□□ -0.53
SCN8A-202ENST00000355133 WNT1P04628 370 aa11.75□□□□□ -0.53
SCN8A-202ENST00000355133 CD96P40200 585 aa11.75□□□□□ -0.53
SCN8A-202ENST00000355133 ETFDHQ16134 617 aa11.75□□□□□ -0.53
SCN8A-202ENST00000355133 CTF1Q16619 201 aa11.75□□□□□ -0.53
SCN8A-202ENST00000355133 GLDNQ6ZMI3 551 aaPredicted RBP11.75□□□□□ -0.53
SCN8A-202ENST00000355133 MOB1BQ7L9L4 216 aa11.75□□□□□ -0.53
SCN8A-202ENST00000355133 PRR7Q8TB68 274 aa11.75□□□□□ -0.53
SCN8A-202ENST00000355133 ZNF385DQ9H6B1 395 aa11.75□□□□□ -0.53
SCN8A-202ENST00000355133 TCFL5Q9UL49 500 aa11.75□□□□□ -0.53
SCN8A-202ENST00000355133 ALX3O95076 343 aa11.74□□□□□ -0.53
SCN8A-202ENST00000355133 ZNF141Q15928 474 aa11.74□□□□□ -0.53
SCN8A-202ENST00000355133 FFAR4Q5NUL3 377 aa11.74□□□□□ -0.53
SCN8A-202ENST00000355133 C11orf87Q6NUJ2 197 aa11.74□□□□□ -0.53
SCN8A-202ENST00000355133 ZDHHC11Q9H8X9 412 aa11.74□□□□□ -0.53
SCN8A-202ENST00000355133 CYSLTR2Q9NS75 346 aa11.74□□□□□ -0.53
SCN8A-202ENST00000355133 FAM157AC9JC47 383 aa11.74□□□□□ -0.53
SCN8A-202ENST00000355133 MAGEA5P43359 124 aa11.74□□□□□ -0.53
SCN8A-202ENST00000355133 FAM3AP98173 230 aa11.74□□□□□ -0.53
SCN8A-202ENST00000355133 CDC20Q12834 499 aa11.74□□□□□ -0.53
SCN8A-202ENST00000355133 ZNF574Q6ZN55 896 aaPredicted RBP11.74□□□□□ -0.53
SCN8A-202ENST00000355133 DGAT2L6Q6ZPD8 337 aa11.74□□□□□ -0.53
SCN8A-202ENST00000355133 BHLHA15Q7RTS1 189 aaPredicted RBP11.74□□□□□ -0.53
SCN8A-202ENST00000355133 TMEM147Q9BVK8 224 aa11.74□□□□□ -0.53
SCN8A-202ENST00000355133 ZIC1Q15915 447 aa11.74□□□□□ -0.53
SCN8A-202ENST00000355133 IGFBP7Q16270 282 aa11.74□□□□□ -0.53
SCN8A-202ENST00000355133 GAL3ST2Q9H3Q3 398 aa11.74□□□□□ -0.53
SCN8A-202ENST00000355133 PLSCR3Q9NRY6 295 aa11.74□□□□□ -0.53
SCN8A-202ENST00000355133 UQCC1Q9NVA1 299 aa11.74□□□□□ -0.53
SCN8A-202ENST00000355133 SCN9AQ15858 1988 aa11.74□□□□□ -0.53
SCN8A-202ENST00000355133 SHROOM3Q8TF72 1996 aa11.74□□□□□ -0.53
SCN8A-202ENST00000355133 PLPP2O43688 288 aa11.74□□□□□ -0.53
SCN8A-202ENST00000355133 NPEPL1Q8NDH3 523 aa11.74□□□□□ -0.53
SCN8A-202ENST00000355133 ZNF680Q8NEM1 530 aa11.74□□□□□ -0.53
SCN8A-202ENST00000355133 CHRDL1Q9BU40 450 aa11.74□□□□□ -0.53
SCN8A-202ENST00000355133 ZNF586Q9NXT0 402 aa11.74□□□□□ -0.53
SCN8A-202ENST00000355133 EXOGQ9Y2C4 368 aaKnown RBP11.74□□□□□ -0.53
SCN8A-202ENST00000355133 CPN1P15169 458 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 TMEM88Q6PEY1 159 aa11.73□□□□□ -0.53
SCN8A-202ENST00000355133 BTNL3Q6UXE8 466 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms