RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 SEH1LQ96EE3 360 aa8.29□□□□□ -1.08
SMG6-202ENST00000354901 SPACA5Q96QH8 159 aa8.29□□□□□ -1.08
SMG6-202ENST00000354901 ZPBPQ9BS86 351 aa8.29□□□□□ -1.08
SMG6-202ENST00000354901 FBXL17Q9UF56 701 aa8.29□□□□□ -1.08
SMG6-202ENST00000354901 HDGFL3Q9Y3E1 203 aa8.29□□□□□ -1.08
SMG6-202ENST00000354901 RALGAPA1Q6GYQ0 2036 aa8.29□□□□□ -1.08
SMG6-202ENST00000354901 LOC100289279A0A1B0GTE1 492 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 P2RY10O00398 339 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 SLC17A2O00624 439 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 OR4A8P0C604 315 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 IGFBP4P22692 258 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 ZBTB25P24278 435 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 HTR2CP28335 458 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 EMC4Q5J8M3 183 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 DCXRQ7Z4W1 244 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 FAM185AQ8N0U4 392 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 OR6X1Q8NH79 312 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 SLC41A2Q96JW4 573 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 WWTR1Q9GZV5 400 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 GAB2Q9UQC2 676 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 FER1L5A0AVI2 2057 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 SIAH2O43255 324 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 IGKV3-11P04433 115 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 ZNF823P16415 610 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 FBLP22087 321 aaKnown RBP8.28□□□□□ -1.08
SMG6-202ENST00000354901 HOXA6P31267 233 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 POU3F1Q03052 451 aaPredicted RBP8.28□□□□□ -1.08
SMG6-202ENST00000354901 RPUSD3Q6P087 351 aaKnown RBP8.28□□□□□ -1.08
SMG6-202ENST00000354901 KCTD18Q6PI47 426 aaPredicted RBP8.28□□□□□ -1.08
SMG6-202ENST00000354901 NEK7Q8TDX7 302 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 ASB5Q8WWX0 329 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 LIPHQ8WWY8 451 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 RAB39BQ96DA2 213 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 SAT2Q96F10 170 aaPredicted RBP8.28□□□□□ -1.08
SMG6-202ENST00000354901 SMIM8Q96KF7 97 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 CCNL2Q96S94 520 aaPredicted RBP8.28□□□□□ -1.08
SMG6-202ENST00000354901 DIRC2Q96SL1 478 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 FAAP24Q9BTP7 215 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 MRI1Q9BV20 369 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 KLK13Q9UKR3 277 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 F8VVB4 439 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 F8VWA3 439 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 K7EPK0 472 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 AQP7O14520 342 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 GUSBP08236 651 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 FCGR2CP31995 323 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 ALDH3B1P43353 468 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 HMGN3Q15651 99 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 SGCBQ16585 318 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 CDCP2Q5VXM1 449 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 BTNL8Q6UX41 500 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 TMEM182Q6ZP80 229 aaPredicted RBP8.28□□□□□ -1.08
SMG6-202ENST00000354901 S100A7AQ86SG5 101 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.28□□□□□ -1.08
SMG6-202ENST00000354901 WDFY1Q8IWB7 410 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 FAM71E2Q8N5Q1 922 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 SLC35G3Q8N808 338 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 TERB2Q8NHR7 220 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 RNF128Q8TEB7 428 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 GALNT14Q96FL9 552 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 VN1R1Q9GZP7 353 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 PCED1AQ9H1Q7 454 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 PLA2G2EQ9NZK7 142 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 PADI1Q9ULC6 663 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 MRPS17Q9Y2R5 130 aaKnown RBP8.28□□□□□ -1.08
SMG6-202ENST00000354901 RFNGQ9Y644 331 aa8.28□□□□□ -1.08
SMG6-202ENST00000354901 IGKV1D-43A0A0B4J1Z2 117 aa8.27□□□□□ -1.08
SMG6-202ENST00000354901 IGHV1OR15-9A0A0B4J2B8 117 aa8.27□□□□□ -1.08
SMG6-202ENST00000354901 TMEM269A0A1B0GVZ9 245 aa8.27□□□□□ -1.08
SMG6-202ENST00000354901 LOC107986453A0A1B0GWG9 222 aa8.27□□□□□ -1.08
SMG6-202ENST00000354901 SLC6A8P48029 635 aa8.27□□□□□ -1.08
SMG6-202ENST00000354901 FBXW4P57775 412 aa8.27□□□□□ -1.08
SMG6-202ENST00000354901 DRAM2Q6UX65 266 aa8.27□□□□□ -1.08
SMG6-202ENST00000354901 C5orf24Q7Z6I8 188 aa8.27□□□□□ -1.08
SMG6-202ENST00000354901 RABEPKQ7Z6M1 372 aa8.27□□□□□ -1.08
SMG6-202ENST00000354901 RTN4RL2Q86UN3 420 aa8.27□□□□□ -1.08
SMG6-202ENST00000354901 COMMD2Q86X83 199 aa8.27□□□□□ -1.08
SMG6-202ENST00000354901 PNLDC1Q8NA58 520 aaKnown RBP8.27□□□□□ -1.08
SMG6-202ENST00000354901 Q8NFD4 153 aa8.27□□□□□ -1.08
SMG6-202ENST00000354901 DAZLQ92904 295 aaKnown RBP8.27□□□□□ -1.08
SMG6-202ENST00000354901 SLC25A31Q9H0C2 315 aa8.27□□□□□ -1.08
SMG6-202ENST00000354901 TXNIPQ9H3M7 391 aa8.27□□□□□ -1.08
SMG6-202ENST00000354901 UBE2ZQ9H832 354 aaPredicted RBP8.27□□□□□ -1.08
SMG6-202ENST00000354901 LMAN1LQ9HAT1 526 aa8.27□□□□□ -1.08
SMG6-202ENST00000354901 TUBG2Q9NRH3 451 aa8.27□□□□□ -1.08
SMG6-202ENST00000354901 IGLV1-36A0A0B4J1U3 117 aa8.27□□□□□ -1.09
SMG6-202ENST00000354901 ALG1L2C9J202 215 aa8.27□□□□□ -1.09
SMG6-202ENST00000354901 XRCC2O43543 280 aa8.27□□□□□ -1.09
SMG6-202ENST00000354901 GZMBP10144 247 aa8.27□□□□□ -1.09
SMG6-202ENST00000354901 EIF5AP63241 154 aaKnown RBP8.27□□□□□ -1.09
SMG6-202ENST00000354901 ZNF880Q6PDB4 577 aa8.27□□□□□ -1.09
SMG6-202ENST00000354901 SYT13Q7L8C5 426 aa8.27□□□□□ -1.09
SMG6-202ENST00000354901 FJX1Q86VR8 437 aa8.27□□□□□ -1.09
SMG6-202ENST00000354901 SLC35B3Q9H1N7 401 aa8.27□□□□□ -1.09
SMG6-202ENST00000354901 SEMA5BQ9P283 1151 aa8.27□□□□□ -1.09
SMG6-202ENST00000354901 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.27□□□□□ -1.09
SMG6-202ENST00000354901 BLACEA4D250 179 aa8.27□□□□□ -1.09
SMG6-202ENST00000354901 A8MVM7 634 aa8.27□□□□□ -1.09
SMG6-202ENST00000354901 CDRT15L2A8MXV6 281 aa8.27□□□□□ -1.09
SMG6-202ENST00000354901 NPIPA5E9PKD4 350 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms