RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 PSMD9O00233 223 aa12.9□□□□□ -0.34
PDGFA-201ENST00000354513 GABRA2P47869 451 aa12.9□□□□□ -0.34
PDGFA-201ENST00000354513 C2orf68Q2NKX9 166 aa12.9□□□□□ -0.34
PDGFA-201ENST00000354513 TMEM236Q5W0B7 351 aa12.9□□□□□ -0.34
PDGFA-201ENST00000354513 NCR3LG1Q68D85 454 aa12.9□□□□□ -0.34
PDGFA-201ENST00000354513 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.9□□□□□ -0.34
PDGFA-201ENST00000354513 CD177Q8N6Q3 437 aa12.9□□□□□ -0.34
PDGFA-201ENST00000354513 AQP3Q92482 292 aa12.9□□□□□ -0.34
PDGFA-201ENST00000354513 PPP1R14AQ96A00 147 aa12.9□□□□□ -0.34
PDGFA-201ENST00000354513 ZNF488Q96MN9 340 aa12.9□□□□□ -0.34
PDGFA-201ENST00000354513 NIPAL2Q9H841 368 aa12.9□□□□□ -0.34
PDGFA-201ENST00000354513 COPS3Q9UNS2 423 aa12.9□□□□□ -0.34
PDGFA-201ENST00000354513 FOXJ3Q9UPW0 622 aa12.9□□□□□ -0.34
PDGFA-201ENST00000354513 A0A0U1RQV5 110 aa12.89□□□□□ -0.35
PDGFA-201ENST00000354513 CHST1O43916 411 aa12.89□□□□□ -0.35
PDGFA-201ENST00000354513 SRSF10O75494 262 aaKnown RBP12.89□□□□□ -0.35
PDGFA-201ENST00000354513 PAHP00439 452 aa12.89□□□□□ -0.35
PDGFA-201ENST00000354513 PAICSP22234 425 aaKnown RBP12.89□□□□□ -0.35
PDGFA-201ENST00000354513 CEBPDP49716 269 aaPredicted RBP12.89□□□□□ -0.35
PDGFA-201ENST00000354513 ERVFRD-1P60508 538 aa12.89□□□□□ -0.35
PDGFA-201ENST00000354513 GNG3P63215 75 aa12.89□□□□□ -0.35
PDGFA-201ENST00000354513 MFGE8Q08431 387 aaPredicted RBP12.89□□□□□ -0.35
PDGFA-201ENST00000354513 LY6EQ16553 131 aa12.89□□□□□ -0.35
PDGFA-201ENST00000354513 BEAN1Q3B7T3 259 aa12.89□□□□□ -0.35
PDGFA-201ENST00000354513 CEACAM21Q3KPI0 293 aa12.89□□□□□ -0.35
PDGFA-201ENST00000354513 SLC35D3Q5M8T2 416 aa12.89□□□□□ -0.35
PDGFA-201ENST00000354513 MKXQ8IYA7 352 aa12.89□□□□□ -0.35
PDGFA-201ENST00000354513 TMEM185AQ8NFB2 350 aa12.89□□□□□ -0.35
PDGFA-201ENST00000354513 PIFOQ8TCI5 191 aa12.89□□□□□ -0.35
PDGFA-201ENST00000354513 NRG4Q8WWG1 115 aa12.89□□□□□ -0.35
PDGFA-201ENST00000354513 SSX3Q99909 188 aa12.89□□□□□ -0.35
PDGFA-201ENST00000354513 TTTY10Q9BZA0 68 aa12.89□□□□□ -0.35
PDGFA-201ENST00000354513 MEGF9Q9H1U4 602 aa12.89□□□□□ -0.35
PDGFA-201ENST00000354513 RIBC2Q9H4K1 309 aa12.89□□□□□ -0.35
PDGFA-201ENST00000354513 SLC25A19Q9HC21 320 aa12.89□□□□□ -0.35
PDGFA-201ENST00000354513 C8orf4Q9NR00 106 aa12.89□□□□□ -0.35
PDGFA-201ENST00000354513 ENOPH1Q9UHY7 261 aa12.89□□□□□ -0.35
PDGFA-201ENST00000354513 TRBV23-1A0A0A0MS06 115 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 G3V4G9 280 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 MTRF1O75570 445 aaKnown RBP12.88□□□□□ -0.35
PDGFA-201ENST00000354513 FAHP16930 419 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 MAP2K3P46734 347 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 BMXP51813 675 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 CRISP1P54107 249 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 ESRRGP62508 458 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 APOFQ13790 326 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 ACP7Q6ZNF0 438 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 FAM185AQ8N0U4 392 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 PACRGLQ8N7B6 248 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 CFHR4Q92496 578 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 TEAD3Q99594 435 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 VCXQ9H320 206 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 GPR84Q9NQS5 396 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 ANKRD61A6NGH8 418 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 SYNGR1O43759 233 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 ANGPTL7O43827 346 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 MRPL3P09001 348 aaKnown RBP12.88□□□□□ -0.35
PDGFA-201ENST00000354513 CSF1P09603 554 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 GABRA5P31644 462 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 KIR2DS4P43632 304 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 ZNF273Q14593 569 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 HERPUD1Q15011 391 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 LRRC75BQ2VPJ9 315 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 ZIK1Q3SY52 487 aaPredicted RBP12.88□□□□□ -0.35
PDGFA-201ENST00000354513 HAGHLQ6PII5 290 aaPredicted RBP12.88□□□□□ -0.35
PDGFA-201ENST00000354513 KRT77Q7Z794 578 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 DYNAPQ8N1N2 210 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 POC1AQ8NBT0 407 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 OR51E1Q8TCB6 317 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 OR8B4Q96RC9 309 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 GABARAPL3Q9BY60 117 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 YIPF3Q9GZM5 350 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 PBOV1Q9GZY1 135 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 LAMP5Q9UJQ1 280 aa12.88□□□□□ -0.35
PDGFA-201ENST00000354513 TMEM269A0A1B0GVZ9 245 aa12.87□□□□□ -0.35
PDGFA-201ENST00000354513 OR5B21A6NL26 309 aa12.87□□□□□ -0.35
PDGFA-201ENST00000354513 H0YAE9 185 aa12.87□□□□□ -0.35
PDGFA-201ENST00000354513 TTRP02766 147 aa12.87□□□□□ -0.35
PDGFA-201ENST00000354513 PGA5P0DJD9 388 aa12.87□□□□□ -0.35
PDGFA-201ENST00000354513 CCL3L1P16619 93 aa12.87□□□□□ -0.35
PDGFA-201ENST00000354513 POLR2IP36954 125 aaKnown RBP12.87□□□□□ -0.35
PDGFA-201ENST00000354513 DLX6P56179 175 aa12.87□□□□□ -0.35
PDGFA-201ENST00000354513 ROM1Q03395 351 aa12.87□□□□□ -0.35
PDGFA-201ENST00000354513 LDLRAD2Q5SZI1 272 aa12.87□□□□□ -0.35
PDGFA-201ENST00000354513 KPRPQ5T749 579 aaPredicted RBP12.87□□□□□ -0.35
PDGFA-201ENST00000354513 SAMD5Q5TGI4 173 aa12.87□□□□□ -0.35
PDGFA-201ENST00000354513 PLCXD3Q63HM9 321 aa12.87□□□□□ -0.35
PDGFA-201ENST00000354513 TMEM42Q69YG0 159 aa12.87□□□□□ -0.35
PDGFA-201ENST00000354513 TMEM200BQ69YZ2 307 aa12.87□□□□□ -0.35
PDGFA-201ENST00000354513 DEGS2Q6QHC5 323 aa12.87□□□□□ -0.35
PDGFA-201ENST00000354513 MOB3CQ70IA8 216 aa12.87□□□□□ -0.35
PDGFA-201ENST00000354513 THAP5Q7Z6K1 395 aa12.87□□□□□ -0.35
PDGFA-201ENST00000354513 C11orf44Q8N8P7 122 aa12.87□□□□□ -0.35
PDGFA-201ENST00000354513 OR5A2Q8NGI9 324 aa12.87□□□□□ -0.35
PDGFA-201ENST00000354513 OR51G2Q8NGK0 314 aa12.87□□□□□ -0.35
PDGFA-201ENST00000354513 OR5D13Q8NGL4 314 aa12.87□□□□□ -0.35
PDGFA-201ENST00000354513 FAM81AQ8TBF8 368 aa12.87□□□□□ -0.35
PDGFA-201ENST00000354513 VCX3BQ9H321 246 aa12.87□□□□□ -0.35
PDGFA-201ENST00000354513 SMPD3Q9NY59 655 aaPredicted RBP12.87□□□□□ -0.35
PDGFA-201ENST00000354513 NUFIP1Q9UHK0 495 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms