RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 CPMP14384 443 aa11.67□□□□□ -0.54
IFT88-202ENST00000351808 GZMHP20718 246 aa11.67□□□□□ -0.54
IFT88-202ENST00000351808 RAB38P57729 211 aa11.67□□□□□ -0.54
IFT88-202ENST00000351808 SELENOTP62341 195 aa11.67□□□□□ -0.54
IFT88-202ENST00000351808 FHL5Q5TD97 284 aa11.67□□□□□ -0.54
IFT88-202ENST00000351808 RNF144BQ7Z419 303 aa11.67□□□□□ -0.54
IFT88-202ENST00000351808 C9orf40Q8IXQ3 194 aa11.67□□□□□ -0.54
IFT88-202ENST00000351808 OR4N2Q8NGD1 307 aa11.67□□□□□ -0.54
IFT88-202ENST00000351808 ZNF514Q96K75 400 aaPredicted RBP11.67□□□□□ -0.54
IFT88-202ENST00000351808 SPACA5Q96QH8 159 aa11.67□□□□□ -0.54
IFT88-202ENST00000351808 TSPAN32Q96QS1 320 aa11.67□□□□□ -0.54
IFT88-202ENST00000351808 KAT7O95251 611 aa11.66□□□□□ -0.54
IFT88-202ENST00000351808 CSNK2A1P68400 391 aaPredicted RBP11.66□□□□□ -0.54
IFT88-202ENST00000351808 ARFRP1Q13795 201 aa11.66□□□□□ -0.54
IFT88-202ENST00000351808 SP6Q3SY56 376 aa11.66□□□□□ -0.54
IFT88-202ENST00000351808 MORN1Q5T089 497 aa11.66□□□□□ -0.54
IFT88-202ENST00000351808 CDCP2Q5VXM1 449 aa11.66□□□□□ -0.54
IFT88-202ENST00000351808 NKAIN3Q8N8D7 197 aa11.66□□□□□ -0.54
IFT88-202ENST00000351808 CSNK2A3Q8NEV1 391 aa11.66□□□□□ -0.54
IFT88-202ENST00000351808 KTI12Q96EK9 354 aaPredicted RBP11.66□□□□□ -0.54
IFT88-202ENST00000351808 SCARF2Q96GP6 870 aaPredicted RBP11.66□□□□□ -0.54
IFT88-202ENST00000351808 PCED1AQ9H1Q7 454 aa11.66□□□□□ -0.54
IFT88-202ENST00000351808 P4HTMQ9NXG6 502 aa11.66□□□□□ -0.54
IFT88-202ENST00000351808 YIPF1Q9Y548 306 aa11.66□□□□□ -0.54
IFT88-202ENST00000351808 FREM3P0C091 2139 aa11.66□□□□□ -0.54
IFT88-202ENST00000351808 IGKV1D-42A0A075B6H8 117 aa11.66□□□□□ -0.54
IFT88-202ENST00000351808 LOC101059948A0A1B0GTJ6 334 aa11.66□□□□□ -0.54
IFT88-202ENST00000351808 FAM230AA0A1W2PPH8 454 aa11.66□□□□□ -0.54
IFT88-202ENST00000351808 CBY3A6NI87 242 aa11.66□□□□□ -0.54
IFT88-202ENST00000351808 ZNF888P0CJ79 500 aaPredicted RBP11.66□□□□□ -0.54
IFT88-202ENST00000351808 CARD18P57730 90 aa11.66□□□□□ -0.54
IFT88-202ENST00000351808 NRSN1Q8IZ57 195 aa11.66□□□□□ -0.54
IFT88-202ENST00000351808 ADPRHL1Q8NDY3 354 aa11.66□□□□□ -0.54
IFT88-202ENST00000351808 OIT3Q8WWZ8 545 aa11.66□□□□□ -0.54
IFT88-202ENST00000351808 CALHM2Q9HA72 323 aa11.66□□□□□ -0.54
IFT88-202ENST00000351808 GPR34Q9UPC5 381 aa11.66□□□□□ -0.54
IFT88-202ENST00000351808 HIF3AQ9Y2N7 669 aa11.66□□□□□ -0.54
IFT88-202ENST00000351808 LRP12Q9Y561 859 aa11.66□□□□□ -0.54
IFT88-202ENST00000351808 TMEM238LA0A1B0GVL6 79 aa11.65□□□□□ -0.54
IFT88-202ENST00000351808 MPIG6BO95866 241 aa11.65□□□□□ -0.54
IFT88-202ENST00000351808 DBHP09172 617 aa11.65□□□□□ -0.54
IFT88-202ENST00000351808 GSTP1P09211 210 aaKnown RBP11.65□□□□□ -0.54
IFT88-202ENST00000351808 CSF2RAP15509 400 aa11.65□□□□□ -0.54
IFT88-202ENST00000351808 PNRC1Q12796 327 aaPredicted RBP11.65□□□□□ -0.54
IFT88-202ENST00000351808 RIPPLY2Q5TAB7 128 aa11.65□□□□□ -0.54
IFT88-202ENST00000351808 SLC18B1Q6NT16 456 aa11.65□□□□□ -0.54
IFT88-202ENST00000351808 PARS2Q7L3T8 475 aaKnown RBP11.65□□□□□ -0.54
IFT88-202ENST00000351808 RHBDD1Q8TEB9 315 aa11.65□□□□□ -0.54
IFT88-202ENST00000351808 LPAR5Q9H1C0 372 aa11.65□□□□□ -0.54
IFT88-202ENST00000351808 BANF2Q9H503 90 aa11.65□□□□□ -0.54
IFT88-202ENST00000351808 P2RY10O00398 339 aa11.65□□□□□ -0.54
IFT88-202ENST00000351808 CTSVO60911 334 aa11.65□□□□□ -0.54
IFT88-202ENST00000351808 OR6A2O95222 327 aa11.65□□□□□ -0.54
IFT88-202ENST00000351808 BPNT1O95861 308 aa11.65□□□□□ -0.54
IFT88-202ENST00000351808 SOD2P04179 222 aa11.65□□□□□ -0.54
IFT88-202ENST00000351808 PFN1P07737 140 aaKnown RBP11.65□□□□□ -0.54
IFT88-202ENST00000351808 CT62P0C5K7 136 aa11.65□□□□□ -0.54
IFT88-202ENST00000351808 GLI4P10075 376 aa11.65□□□□□ -0.54
IFT88-202ENST00000351808 ZNF43P17038 809 aa11.65□□□□□ -0.54
IFT88-202ENST00000351808 TMEM50BP56557 158 aa11.65□□□□□ -0.54
IFT88-202ENST00000351808 RPL18Q07020 188 aaKnown RBP11.65□□□□□ -0.54
IFT88-202ENST00000351808 PSRC1Q6PGN9 363 aaPredicted RBP11.65□□□□□ -0.54
IFT88-202ENST00000351808 TMEFF1Q8IYR6 380 aa11.65□□□□□ -0.54
IFT88-202ENST00000351808 LYG1Q8N1E2 194 aa11.65□□□□□ -0.54
IFT88-202ENST00000351808 IL22RA1Q8N6P7 574 aa11.65□□□□□ -0.54
IFT88-202ENST00000351808 OR2L3Q8NG85 312 aa11.65□□□□□ -0.54
IFT88-202ENST00000351808 TMEM170AQ8WVE7 144 aa11.65□□□□□ -0.54
IFT88-202ENST00000351808 NUS1Q96E22 293 aa11.65□□□□□ -0.54
IFT88-202ENST00000351808 MS4A10Q96PG2 267 aa11.65□□□□□ -0.54
IFT88-202ENST00000351808 ADOQ96SZ5 270 aa11.65□□□□□ -0.54
IFT88-202ENST00000351808 VN1R1Q9GZP7 353 aa11.65□□□□□ -0.54
IFT88-202ENST00000351808 SDF2L1Q9HCN8 221 aa11.65□□□□□ -0.54
IFT88-202ENST00000351808 GNG13Q9P2W3 67 aa11.65□□□□□ -0.54
IFT88-202ENST00000351808 PAM16Q9Y3D7 125 aa11.65□□□□□ -0.54
IFT88-202ENST00000351808 A0A1B0GUS0 222 aa11.65□□□□□ -0.55
IFT88-202ENST00000351808 A0A1W2PP11 408 aa11.65□□□□□ -0.55
IFT88-202ENST00000351808 IGKV1D-16P01601 117 aa11.65□□□□□ -0.55
IFT88-202ENST00000351808 HIST1H1DP16402 221 aaKnown RBP11.65□□□□□ -0.55
IFT88-202ENST00000351808 OMGP23515 440 aa11.65□□□□□ -0.55
IFT88-202ENST00000351808 SNU13P55769 128 aaKnown RBP11.65□□□□□ -0.55
IFT88-202ENST00000351808 C1orf140Q5VVS0 124 aa11.65□□□□□ -0.55
IFT88-202ENST00000351808 TOMM20LQ6UXN7 152 aa11.65□□□□□ -0.55
IFT88-202ENST00000351808 OR8G5Q8NG78 346 aa11.65□□□□□ -0.55
IFT88-202ENST00000351808 IL22RA2Q969J5 263 aa11.65□□□□□ -0.55
IFT88-202ENST00000351808 PCGF1Q9BSM1 259 aa11.65□□□□□ -0.55
IFT88-202ENST00000351808 ABHD6Q9BV23 337 aa11.65□□□□□ -0.55
IFT88-202ENST00000351808 RNF150Q9ULK6 438 aa11.65□□□□□ -0.55
IFT88-202ENST00000351808 ANAPC10Q9UM13 185 aa11.65□□□□□ -0.55
IFT88-202ENST00000351808 SLC7A11Q9UPY5 501 aa11.65□□□□□ -0.55
IFT88-202ENST00000351808 SCDO00767 359 aa11.64□□□□□ -0.55
IFT88-202ENST00000351808 IGHEP01854 428 aa11.64□□□□□ -0.55
IFT88-202ENST00000351808 KLF3P57682 345 aaPredicted RBP11.64□□□□□ -0.55
IFT88-202ENST00000351808 ZNF74Q16587 644 aa11.64□□□□□ -0.55
IFT88-202ENST00000351808 MPV17LQ2QL34 196 aa11.64□□□□□ -0.55
IFT88-202ENST00000351808 DEFB134Q4QY38 66 aa11.64□□□□□ -0.55
IFT88-202ENST00000351808 SP5Q6BEB4 398 aaPredicted RBP11.64□□□□□ -0.55
IFT88-202ENST00000351808 SLC8B1Q6J4K2 584 aa11.64□□□□□ -0.55
IFT88-202ENST00000351808 C16orf54Q6UWD8 224 aa11.64□□□□□ -0.55
IFT88-202ENST00000351808 TMEM25Q86YD3 366 aa11.64□□□□□ -0.55
IFT88-202ENST00000351808 OR52M1Q8NGK5 317 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms