RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 PAIP2BQ9ULR5 123 aaKnown RBP5.97□□□□□ -1.45
TRIM55-203ENST00000350034 HSF4Q9ULV5 492 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 SLC7A11Q9UPY5 501 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 STARD10Q9Y365 291 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 FREM2Q5SZK8 3169 aa5.97□□□□□ -1.45
TRIM55-203ENST00000350034 CNTRLQ7Z7A1 2325 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 FAM230AA0A1W2PPH8 454 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 TMEM82A0PJX8 343 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 FAM172BPA6NC97 362 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 MBD3L4A6NDZ8 208 aaPredicted RBP5.96□□□□□ -1.46
TRIM55-203ENST00000350034 MBD3L3A6NE82 208 aaPredicted RBP5.96□□□□□ -1.46
TRIM55-203ENST00000350034 MBD3L5A6NJ08 208 aaPredicted RBP5.96□□□□□ -1.46
TRIM55-203ENST00000350034 SMLR1H3BR10 107 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 H3BUI4 141 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 MSTNO14793 375 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 KLK10O43240 276 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 SSNA1O43805 119 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 ANGPTL7O43827 346 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 CREBL2O60519 120 aaPredicted RBP5.96□□□□□ -1.46
TRIM55-203ENST00000350034 OR2A4O95047 310 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 NGFP01138 241 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 CGAP01215 116 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 AMY2AP04746 511 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 FCER2P06734 321 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 CCL2P13500 99 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 ZNF14P17017 642 aaPredicted RBP5.96□□□□□ -1.46
TRIM55-203ENST00000350034 SERPINA2P20848 420 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 BLVRBP30043 206 aaPredicted RBP5.96□□□□□ -1.46
TRIM55-203ENST00000350034 APLNRP35414 380 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 PMELP40967 661 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 CXADRP78310 365 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 TGFBR3Q03167 851 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 MALLQ13021 153 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 DAZAP2Q15038 168 aaPredicted RBP5.96□□□□□ -1.46
TRIM55-203ENST00000350034 GABRA6Q16445 453 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 PLCXD3Q63HM9 321 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 RTL6Q6ICC9 239 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 OR2A2Q6IF42 318 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 OR52W1Q6IF63 320 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 IDO2Q6ZQW0 420 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 Q6ZT83 130 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 SEM1Q6ZVN7 128 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 NLRC3Q7RTR2 1065 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 MRPL21Q7Z2W9 205 aaKnown RBP5.96□□□□□ -1.46
TRIM55-203ENST00000350034 MDP1Q86V88 176 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 TMEM200AQ86VY9 491 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 ZDHHC22Q8N966 263 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 OR10K1Q8NGX5 313 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 OR6K3Q8NGY3 331 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 MBD3L2Q8NHZ7 208 aaPredicted RBP5.96□□□□□ -1.46
TRIM55-203ENST00000350034 ZNF431Q8TF32 576 aaPredicted RBP5.96□□□□□ -1.46
TRIM55-203ENST00000350034 HPSE2Q8WWQ2 592 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 PIGCQ92535 297 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 OR2A7Q96R45 310 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 S100A13Q99584 98 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 ZNF436Q9C0F3 470 aaPredicted RBP5.96□□□□□ -1.46
TRIM55-203ENST00000350034 CHST6Q9GZX3 395 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 POFUT1Q9H488 388 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 RANBP3Q9H6Z4 567 aaPredicted RBP5.96□□□□□ -1.46
TRIM55-203ENST00000350034 IFT46Q9NQC8 304 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 PLSCR4Q9NRQ2 329 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 CRIM1Q9NZV1 1036 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 DKK4Q9UBT3 224 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 WASF3Q9UPY6 502 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 PLEKHA6Q9Y2H5 1048 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 BOLA1Q9Y3E2 137 aa5.96□□□□□ -1.46
TRIM55-203ENST00000350034 FAM90A10PA6NDY2 464 aa5.95□□□□□ -1.46
TRIM55-203ENST00000350034 FAM90A18PA6NE21 464 aa5.95□□□□□ -1.46
TRIM55-203ENST00000350034 FAM90A16PA6NEW6 464 aa5.95□□□□□ -1.46
TRIM55-203ENST00000350034 FAM90A20PA6NIJ5 464 aa5.95□□□□□ -1.46
TRIM55-203ENST00000350034 FAM90A8PA6NJQ4 464 aa5.95□□□□□ -1.46
TRIM55-203ENST00000350034 FAM90A7PA6NKC0 464 aa5.95□□□□□ -1.46
TRIM55-203ENST00000350034 OR2AT4A6NND4 320 aa5.95□□□□□ -1.46
TRIM55-203ENST00000350034 CD300LBA8K4G0 201 aa5.95□□□□□ -1.46
TRIM55-203ENST00000350034 ZNF850A8MQ14 1090 aa5.95□□□□□ -1.46
TRIM55-203ENST00000350034 FAM90A22PA8MWA6 464 aa5.95□□□□□ -1.46
TRIM55-203ENST00000350034 FAM90A12PA8MX19 464 aa5.95□□□□□ -1.46
TRIM55-203ENST00000350034 FAM90A5PA8MXJ8 464 aa5.95□□□□□ -1.46
TRIM55-203ENST00000350034 FAM90A23PA8MXZ1 464 aa5.95□□□□□ -1.46
TRIM55-203ENST00000350034 K7EM74 188 aa5.95□□□□□ -1.46
TRIM55-203ENST00000350034 ZNHIT1O43257 154 aa5.95□□□□□ -1.46
TRIM55-203ENST00000350034 SPRY1O43609 319 aaPredicted RBP5.95□□□□□ -1.46
TRIM55-203ENST00000350034 TNFSF13O75888 250 aa5.95□□□□□ -1.46
TRIM55-203ENST00000350034 HTR3BO95264 441 aa5.95□□□□□ -1.46
TRIM55-203ENST00000350034 IL2RAP01589 272 aa5.95□□□□□ -1.46
TRIM55-203ENST00000350034 RLN1P04808 185 aa5.95□□□□□ -1.46
TRIM55-203ENST00000350034 CRHP06850 196 aa5.95□□□□□ -1.46
TRIM55-203ENST00000350034 GIPP09681 153 aaPredicted RBP5.95□□□□□ -1.46
TRIM55-203ENST00000350034 FAM90A15PP0C7V4 464 aa5.95□□□□□ -1.46
TRIM55-203ENST00000350034 FAM90A13PP0C7W8 464 aa5.95□□□□□ -1.46
TRIM55-203ENST00000350034 FAM90A14PP0C7W9 464 aa5.95□□□□□ -1.46
TRIM55-203ENST00000350034 FAM90A24PP0C7X0 464 aa5.95□□□□□ -1.46
TRIM55-203ENST00000350034 CBR1P16152 277 aa5.95□□□□□ -1.46
TRIM55-203ENST00000350034 CHATP28329 748 aa5.95□□□□□ -1.46
TRIM55-203ENST00000350034 HRH1P35367 487 aa5.95□□□□□ -1.46
TRIM55-203ENST00000350034 MRPS15P82914 257 aaKnown RBP5.95□□□□□ -1.46
TRIM55-203ENST00000350034 DHODHQ02127 395 aa5.95□□□□□ -1.46
TRIM55-203ENST00000350034 PRDX4Q13162 271 aa5.95□□□□□ -1.46
TRIM55-203ENST00000350034 RSU1Q15404 277 aa5.95□□□□□ -1.46
TRIM55-203ENST00000350034 MPPED2Q15777 294 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms