RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 SMDT1Q9H4I9 107 aa12.51□□□□□ -0.41
RLIM-202ENST00000349225 THAP10Q9P2Z0 257 aaPredicted RBP12.51□□□□□ -0.41
RLIM-202ENST00000349225 MRPS23Q9Y3D9 190 aaKnown RBP12.51□□□□□ -0.41
RLIM-202ENST00000349225 MANSC4A6NHS7 340 aaPredicted RBP12.51□□□□□ -0.41
RLIM-202ENST00000349225 SCGNO76038 276 aa12.51□□□□□ -0.41
RLIM-202ENST00000349225 CD55P08174 381 aa12.51□□□□□ -0.41
RLIM-202ENST00000349225 ZNF17P17021 662 aa12.51□□□□□ -0.41
RLIM-202ENST00000349225 ATP6V0CP27449 155 aa12.51□□□□□ -0.41
RLIM-202ENST00000349225 VIPR2P41587 438 aa12.51□□□□□ -0.41
RLIM-202ENST00000349225 WASP42768 502 aa12.51□□□□□ -0.41
RLIM-202ENST00000349225 NOVA1P51513 510 aaKnown RBP12.51□□□□□ -0.41
RLIM-202ENST00000349225 TDGF1P3P51864 188 aa12.51□□□□□ -0.41
RLIM-202ENST00000349225 DEFB103AP81534 67 aa12.51□□□□□ -0.41
RLIM-202ENST00000349225 HSF1Q00613 529 aa12.51□□□□□ -0.41
RLIM-202ENST00000349225 FZD2Q14332 565 aa12.51□□□□□ -0.41
RLIM-202ENST00000349225 ZNF880Q6PDB4 577 aa12.51□□□□□ -0.41
RLIM-202ENST00000349225 TEX38Q6PEX7 206 aa12.51□□□□□ -0.41
RLIM-202ENST00000349225 TMEM171Q8WVE6 324 aa12.51□□□□□ -0.41
RLIM-202ENST00000349225 SLC22A18Q96BI1 424 aa12.51□□□□□ -0.41
RLIM-202ENST00000349225 CCNL2Q96S94 520 aaPredicted RBP12.51□□□□□ -0.41
RLIM-202ENST00000349225 TMEM59Q9BXS4 323 aa12.51□□□□□ -0.41
RLIM-202ENST00000349225 OR10A5Q9H207 317 aa12.51□□□□□ -0.41
RLIM-202ENST00000349225 TXNIPQ9H3M7 391 aa12.51□□□□□ -0.41
RLIM-202ENST00000349225 PITPNC1Q9UKF7 332 aa12.51□□□□□ -0.41
RLIM-202ENST00000349225 WSB1Q9Y6I7 421 aa12.51□□□□□ -0.41
RLIM-202ENST00000349225 TMEM131Q92545 1883 aa12.51□□□□□ -0.41
RLIM-202ENST00000349225 CRTAPO75718 401 aaPredicted RBP12.5□□□□□ -0.41
RLIM-202ENST00000349225 SEC13P55735 322 aa12.5□□□□□ -0.41
RLIM-202ENST00000349225 GLO1Q04760 184 aa12.5□□□□□ -0.41
RLIM-202ENST00000349225 DEFB110Q30KQ9 67 aa12.5□□□□□ -0.41
RLIM-202ENST00000349225 SLC22A25Q6T423 547 aa12.5□□□□□ -0.41
RLIM-202ENST00000349225 ZNF2Q9BSG1 426 aaPredicted RBP12.5□□□□□ -0.41
RLIM-202ENST00000349225 HDHD3Q9BSH5 251 aaPredicted RBP12.5□□□□□ -0.41
RLIM-202ENST00000349225 NSG1A0A0A6YYJ2 146 aa12.5□□□□□ -0.41
RLIM-202ENST00000349225 GNRH1P01148 92 aa12.5□□□□□ -0.41
RLIM-202ENST00000349225 CXCL10P02778 98 aa12.5□□□□□ -0.41
RLIM-202ENST00000349225 MMP16P51512 607 aa12.5□□□□□ -0.41
RLIM-202ENST00000349225 RND2P52198 227 aa12.5□□□□□ -0.41
RLIM-202ENST00000349225 TMEM208Q9BTX3 173 aa12.5□□□□□ -0.41
RLIM-202ENST00000349225 VN1R1Q9GZP7 353 aa12.5□□□□□ -0.41
RLIM-202ENST00000349225 PBOV1Q9GZY1 135 aa12.5□□□□□ -0.41
RLIM-202ENST00000349225 ZNF319Q9P2F9 582 aa12.5□□□□□ -0.41
RLIM-202ENST00000349225 MCTS1Q9ULC4 181 aaKnown RBP12.5□□□□□ -0.41
RLIM-202ENST00000349225 C14orf166Q9Y224 244 aaKnown RBP12.5□□□□□ -0.41
RLIM-202ENST00000349225 RTTNQ86VV8 2226 aa12.5□□□□□ -0.41
RLIM-202ENST00000349225 DOCK8Q8NF50 2099 aa12.5□□□□□ -0.41
RLIM-202ENST00000349225 A0A1W2PP55 124 aa12.5□□□□□ -0.41
RLIM-202ENST00000349225 FAM221AA4D161 298 aa12.5□□□□□ -0.41
RLIM-202ENST00000349225 EPHA1P21709 976 aa12.5□□□□□ -0.41
RLIM-202ENST00000349225 PPM1FP49593 454 aaPredicted RBP12.5□□□□□ -0.41
RLIM-202ENST00000349225 NFATC4Q14934 902 aa12.5□□□□□ -0.41
RLIM-202ENST00000349225 P2RY6Q15077 328 aa12.5□□□□□ -0.41
RLIM-202ENST00000349225 ZNF440Q8IYI8 595 aa12.5□□□□□ -0.41
RLIM-202ENST00000349225 OR2G3Q8NGZ4 309 aa12.5□□□□□ -0.41
RLIM-202ENST00000349225 OR51E1Q8TCB6 317 aa12.5□□□□□ -0.41
RLIM-202ENST00000349225 NIPSNAP3BQ9BS92 247 aa12.5□□□□□ -0.41
RLIM-202ENST00000349225 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.5□□□□□ -0.41
RLIM-202ENST00000349225 KIAA1456Q9P272 454 aa12.5□□□□□ -0.41
RLIM-202ENST00000349225 HIDE1A8MVS5 230 aa12.49□□□□□ -0.41
RLIM-202ENST00000349225 H0YIG0 161 aa12.49□□□□□ -0.41
RLIM-202ENST00000349225 MMP7P09237 267 aaPredicted RBP12.49□□□□□ -0.41
RLIM-202ENST00000349225 OR5AC1P0C628 307 aa12.49□□□□□ -0.41
RLIM-202ENST00000349225 ATXN8OSP0DMR3 200 aa12.49□□□□□ -0.41
RLIM-202ENST00000349225 COL10A1Q03692 680 aa12.49□□□□□ -0.41
RLIM-202ENST00000349225 SGCBQ16585 318 aa12.49□□□□□ -0.41
RLIM-202ENST00000349225 GRASPQ7Z6J2 395 aaPredicted RBP12.49□□□□□ -0.41
RLIM-202ENST00000349225 PLPP5Q8NEB5 264 aa12.49□□□□□ -0.41
RLIM-202ENST00000349225 OR5D18Q8NGL1 313 aa12.49□□□□□ -0.41
RLIM-202ENST00000349225 OR2AJ1Q8NGZ0 328 aa12.49□□□□□ -0.41
RLIM-202ENST00000349225 RERGQ96A58 199 aaPredicted RBP12.49□□□□□ -0.41
RLIM-202ENST00000349225 CSNK1A1P48729 337 aa12.49□□□□□ -0.41
RLIM-202ENST00000349225 TMEM187Q14656 261 aa12.49□□□□□ -0.41
RLIM-202ENST00000349225 PRSS8Q16651 343 aa12.49□□□□□ -0.41
RLIM-202ENST00000349225 FAM90A2PQ658T7 463 aa12.49□□□□□ -0.41
RLIM-202ENST00000349225 SLC35E3Q7Z769 313 aa12.49□□□□□ -0.41
RLIM-202ENST00000349225 SULF2Q8IWU5 870 aa12.49□□□□□ -0.41
RLIM-202ENST00000349225 OR5D14Q8NGL3 314 aa12.49□□□□□ -0.41
RLIM-202ENST00000349225 CLDND2Q8NHS1 167 aa12.49□□□□□ -0.41
RLIM-202ENST00000349225 CALHM2Q9HA72 323 aa12.49□□□□□ -0.41
RLIM-202ENST00000349225 RRAGCQ9HB90 399 aa12.49□□□□□ -0.41
RLIM-202ENST00000349225 AK3Q9UIJ7 227 aa12.49□□□□□ -0.41
RLIM-202ENST00000349225 JMJD7P0C870 316 aa12.49□□□□□ -0.41
RLIM-202ENST00000349225 KIR2DS3Q14952 304 aa12.49□□□□□ -0.41
RLIM-202ENST00000349225 PRR22Q8IZ63 422 aa12.49□□□□□ -0.41
RLIM-202ENST00000349225 ARHGEF39Q8N4T4 335 aa12.49□□□□□ -0.41
RLIM-202ENST00000349225 RNF133Q8WVZ7 376 aa12.49□□□□□ -0.41
RLIM-202ENST00000349225 PATE1Q8WXA2 126 aa12.49□□□□□ -0.41
RLIM-202ENST00000349225 FAM60AQ9NP50 221 aa12.49□□□□□ -0.41
RLIM-202ENST00000349225 IGKV1-9A0A0C4DH69 117 aa12.48□□□□□ -0.41
RLIM-202ENST00000349225 H2BFMP0C1H6 154 aa12.48□□□□□ -0.41
RLIM-202ENST00000349225 HLA-DRB3P79483 266 aa12.48□□□□□ -0.41
RLIM-202ENST00000349225 EWSR1Q01844 656 aaKnown RBP eCLIP12.48□□□□□ -0.41
RLIM-202ENST00000349225 ZNF506Q5JVG8 444 aa12.48□□□□□ -0.41
RLIM-202ENST00000349225 P4HA3Q7Z4N8 544 aa12.48□□□□□ -0.41
RLIM-202ENST00000349225 ODF3L1Q8IXM7 274 aa12.48□□□□□ -0.41
RLIM-202ENST00000349225 C1orf87Q8N0U7 546 aa12.48□□□□□ -0.41
RLIM-202ENST00000349225 R3HDM4Q96D70 268 aa12.48□□□□□ -0.41
RLIM-202ENST00000349225 ADGRG7Q96K78 797 aa12.48□□□□□ -0.41
RLIM-202ENST00000349225 MTCH2Q9Y6C9 303 aa12.48□□□□□ -0.41
RLIM-202ENST00000349225 DXOO77932 396 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms