RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 EIF1P41567 113 aaKnown RBP15.78■□□□□ 0.12
PTP4A3-202ENST00000349124 PCOLCEQ15113 449 aa15.78■□□□□ 0.12
PTP4A3-202ENST00000349124 GGNBP1Q5YKI7 109 aa15.78■□□□□ 0.12
PTP4A3-202ENST00000349124 DHRS7BQ6IAN0 325 aaPredicted RBP15.78■□□□□ 0.12
PTP4A3-202ENST00000349124 SLC16A14Q7RTX9 510 aa15.78■□□□□ 0.12
PTP4A3-202ENST00000349124 SULF2Q8IWU5 870 aa15.78■□□□□ 0.12
PTP4A3-202ENST00000349124 SLC25A43Q8WUT9 341 aaPredicted RBP15.78■□□□□ 0.12
PTP4A3-202ENST00000349124 CMSS1Q9BQ75 279 aaKnown RBP15.78■□□□□ 0.12
PTP4A3-202ENST00000349124 TM2D1Q9BX74 207 aa15.78■□□□□ 0.12
PTP4A3-202ENST00000349124 FBXL17Q9UF56 701 aa15.78■□□□□ 0.12
PTP4A3-202ENST00000349124 NDRG3Q9UGV2 375 aa15.78■□□□□ 0.12
PTP4A3-202ENST00000349124 A0A0J9YW62 118 aa15.78■□□□□ 0.12
PTP4A3-202ENST00000349124 MTRF1O75570 445 aaKnown RBP15.78■□□□□ 0.12
PTP4A3-202ENST00000349124 FCGR2CP31995 323 aa15.78■□□□□ 0.12
PTP4A3-202ENST00000349124 ALDH3B1P43353 468 aa15.78■□□□□ 0.12
PTP4A3-202ENST00000349124 CAV2P51636 162 aa15.78■□□□□ 0.12
PTP4A3-202ENST00000349124 TMEM33P57088 247 aa15.78■□□□□ 0.12
PTP4A3-202ENST00000349124 ZNF468Q5VIY5 522 aaPredicted RBP15.78■□□□□ 0.12
PTP4A3-202ENST00000349124 MRPL14Q6P1L8 145 aaKnown RBP15.78■□□□□ 0.12
PTP4A3-202ENST00000349124 MARS2Q96GW9 593 aaKnown RBP15.78■□□□□ 0.12
PTP4A3-202ENST00000349124 ESRP2Q9H6T0 727 aaKnown RBP15.78■□□□□ 0.12
PTP4A3-202ENST00000349124 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.78■□□□□ 0.12
PTP4A3-202ENST00000349124 PCDHGA1Q9Y5H4 931 aa15.78■□□□□ 0.12
PTP4A3-202ENST00000349124 A0A0U1RQV5 110 aa15.77■□□□□ 0.12
PTP4A3-202ENST00000349124 LOC102725191A0A1B0GVB3 256 aa15.77■□□□□ 0.12
PTP4A3-202ENST00000349124 MED19A0JLT2 244 aaPredicted RBP15.77■□□□□ 0.12
PTP4A3-202ENST00000349124 OR8U9P0C7N5 309 aa15.77■□□□□ 0.12
PTP4A3-202ENST00000349124 OR5H8P0DN80 308 aa15.77■□□□□ 0.12
PTP4A3-202ENST00000349124 FXYD4P59646 89 aa15.77■□□□□ 0.12
PTP4A3-202ENST00000349124 SPAG16Q8N0X2 631 aa15.77■□□□□ 0.12
PTP4A3-202ENST00000349124 TMEM123Q8N131 208 aa15.77■□□□□ 0.12
PTP4A3-202ENST00000349124 OR9K2Q8NGE7 335 aa15.77■□□□□ 0.12
PTP4A3-202ENST00000349124 OR8U1Q8NH10 309 aa15.77■□□□□ 0.12
PTP4A3-202ENST00000349124 TMEM54Q969K7 222 aa15.77■□□□□ 0.12
PTP4A3-202ENST00000349124 REEP6Q96HR9 211 aa15.77■□□□□ 0.12
PTP4A3-202ENST00000349124 SEC11CQ9BY50 192 aa15.77■□□□□ 0.12
PTP4A3-202ENST00000349124 SRXN1Q9BYN0 137 aa15.77■□□□□ 0.12
PTP4A3-202ENST00000349124 AK3Q9UIJ7 227 aa15.77■□□□□ 0.12
PTP4A3-202ENST00000349124 NXT1Q9UKK6 140 aaKnown RBP15.77■□□□□ 0.12
PTP4A3-202ENST00000349124 MEX3AA1L020 520 aaKnown RBP15.77■□□□□ 0.11
PTP4A3-202ENST00000349124 CCDC85CA6NKD9 419 aa15.77■□□□□ 0.11
PTP4A3-202ENST00000349124 K7EPK0 472 aa15.77■□□□□ 0.11
PTP4A3-202ENST00000349124 TOX3O15405 576 aaPredicted RBP15.77■□□□□ 0.11
PTP4A3-202ENST00000349124 DIRAS3O95661 229 aa15.77■□□□□ 0.11
PTP4A3-202ENST00000349124 CRYBA1P05813 215 aa15.77■□□□□ 0.11
PTP4A3-202ENST00000349124 SFTA3P0C7M3 94 aa15.77■□□□□ 0.11
PTP4A3-202ENST00000349124 NOVA1P51513 510 aaKnown RBP15.77■□□□□ 0.11
PTP4A3-202ENST00000349124 ZNF239Q16600 458 aaKnown RBP15.77■□□□□ 0.11
PTP4A3-202ENST00000349124 ZNF774Q6NX45 483 aa15.77■□□□□ 0.11
PTP4A3-202ENST00000349124 C5orf24Q7Z6I8 188 aa15.77■□□□□ 0.11
PTP4A3-202ENST00000349124 FAM71E2Q8N5Q1 922 aa15.77■□□□□ 0.11
PTP4A3-202ENST00000349124 Q96M66 194 aa15.77■□□□□ 0.11
PTP4A3-202ENST00000349124 DNAJB11Q9UBS4 358 aa15.77■□□□□ 0.11
PTP4A3-202ENST00000349124 CEP192Q8TEP8 1941 aa15.77■□□□□ 0.11
PTP4A3-202ENST00000349124 ADH6P28332 368 aa15.76■□□□□ 0.11
PTP4A3-202ENST00000349124 KCNJ3P48549 501 aa15.76■□□□□ 0.11
PTP4A3-202ENST00000349124 PDZK1IP1Q13113 114 aa15.76■□□□□ 0.11
PTP4A3-202ENST00000349124 FNDC9Q8TBE3 224 aa15.76■□□□□ 0.11
PTP4A3-202ENST00000349124 RXFP4Q8TDU9 374 aa15.76■□□□□ 0.11
PTP4A3-202ENST00000349124 ULBP2Q9BZM5 246 aa15.76■□□□□ 0.11
PTP4A3-202ENST00000349124 C1orf123Q9NWV4 160 aa15.76■□□□□ 0.11
PTP4A3-202ENST00000349124 GHRLQ9UBU3 117 aa15.76■□□□□ 0.11
PTP4A3-202ENST00000349124 PADI1Q9ULC6 663 aa15.76■□□□□ 0.11
PTP4A3-202ENST00000349124 AMDHD2Q9Y303 409 aa15.76■□□□□ 0.11
PTP4A3-202ENST00000349124 ZNF175Q9Y473 711 aa15.76■□□□□ 0.11
PTP4A3-202ENST00000349124 TP53I11O14683 189 aa15.76■□□□□ 0.11
PTP4A3-202ENST00000349124 FCGR3AP08637 254 aa15.76■□□□□ 0.11
PTP4A3-202ENST00000349124 OTX1P32242 354 aaPredicted RBP15.76■□□□□ 0.11
PTP4A3-202ENST00000349124 FHITP49789 147 aa15.76■□□□□ 0.11
PTP4A3-202ENST00000349124 PIGPP57054 158 aa15.76■□□□□ 0.11
PTP4A3-202ENST00000349124 PIGYQ3MUY2 71 aa15.76■□□□□ 0.11
PTP4A3-202ENST00000349124 PHLDA2Q53GA4 152 aa15.76■□□□□ 0.11
PTP4A3-202ENST00000349124 C10orf128Q5T292 105 aa15.76■□□□□ 0.11
PTP4A3-202ENST00000349124 IL34Q6ZMJ4 242 aa15.76■□□□□ 0.11
PTP4A3-202ENST00000349124 SGPP2Q8IWX5 399 aa15.76■□□□□ 0.11
PTP4A3-202ENST00000349124 AKR7LQ8NHP1 331 aa15.76■□□□□ 0.11
PTP4A3-202ENST00000349124 PP6455Q8WZ26 134 aa15.76■□□□□ 0.11
PTP4A3-202ENST00000349124 SULT4A1Q9BR01 284 aa15.76■□□□□ 0.11
PTP4A3-202ENST00000349124 ANXA10Q9UJ72 324 aa15.76■□□□□ 0.11
PTP4A3-202ENST00000349124 MRPS17Q9Y2R5 130 aaKnown RBP15.76■□□□□ 0.11
PTP4A3-202ENST00000349124 ZNF850A8MQ14 1090 aa15.75■□□□□ 0.11
PTP4A3-202ENST00000349124 XRCC2O43543 280 aa15.75■□□□□ 0.11
PTP4A3-202ENST00000349124 SNAPINO95295 136 aa15.75■□□□□ 0.11
PTP4A3-202ENST00000349124 SPP1P10451 314 aa15.75■□□□□ 0.11
PTP4A3-202ENST00000349124 FAM189A2Q15884 450 aa15.75■□□□□ 0.11
PTP4A3-202ENST00000349124 ZNF528Q3MIS6 628 aa15.75■□□□□ 0.11
PTP4A3-202ENST00000349124 LYZL2Q7Z4W2 148 aa15.75■□□□□ 0.11
PTP4A3-202ENST00000349124 SPEM1Q8N4L4 309 aa15.75■□□□□ 0.11
PTP4A3-202ENST00000349124 C19orf25Q9UFG5 118 aaPredicted RBP15.75■□□□□ 0.11
PTP4A3-202ENST00000349124 UMODP07911 640 aa15.75■□□□□ 0.11
PTP4A3-202ENST00000349124 TMEM268Q5VZI3 342 aa15.75■□□□□ 0.11
PTP4A3-202ENST00000349124 DHRS11Q6UWP2 260 aa15.75■□□□□ 0.11
PTP4A3-202ENST00000349124 BTNL8Q6UX41 500 aa15.75■□□□□ 0.11
PTP4A3-202ENST00000349124 Q6ZRG5 221 aa15.75■□□□□ 0.11
PTP4A3-202ENST00000349124 AKR1E2Q96JD6 320 aa15.75■□□□□ 0.11
PTP4A3-202ENST00000349124 PRRX2Q99811 253 aa15.75■□□□□ 0.11
PTP4A3-202ENST00000349124 IGKV1-12A0A0C4DH73 117 aa15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 K7ESF4 209 aa15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 GEMIN2O14893 280 aaKnown RBP15.74■□□□□ 0.11
PTP4A3-202ENST00000349124 DEDDO75618 318 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms