RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 GSTP1P09211 210 aaKnown RBP16.41■□□□□ 0.22
SCARF1-202ENST00000348987 KLK2P20151 261 aa16.41■□□□□ 0.22
SCARF1-202ENST00000348987 CXCR1P25024 350 aa16.41■□□□□ 0.22
SCARF1-202ENST00000348987 LMO1P25800 156 aa16.41■□□□□ 0.22
SCARF1-202ENST00000348987 FASLGP48023 281 aa16.41■□□□□ 0.22
SCARF1-202ENST00000348987 CSNK2A1P68400 391 aaPredicted RBP16.41■□□□□ 0.22
SCARF1-202ENST00000348987 CCL20P78556 96 aa16.41■□□□□ 0.22
SCARF1-202ENST00000348987 DEFB133Q30KQ1 61 aa16.41■□□□□ 0.22
SCARF1-202ENST00000348987 CYB5R2Q6BCY4 276 aa16.41■□□□□ 0.22
SCARF1-202ENST00000348987 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.41■□□□□ 0.22
SCARF1-202ENST00000348987 CSNK2A3Q8NEV1 391 aa16.41■□□□□ 0.22
SCARF1-202ENST00000348987 ZNF721Q8TF20 911 aa16.41■□□□□ 0.22
SCARF1-202ENST00000348987 BORCS7-ASMTA0A0B4J1R7 106 aa16.4■□□□□ 0.22
SCARF1-202ENST00000348987 A8MVM7 634 aa16.4■□□□□ 0.22
SCARF1-202ENST00000348987 SYT7O43581 403 aa16.4■□□□□ 0.22
SCARF1-202ENST00000348987 APOBEC1P41238 236 aaKnown RBP16.4■□□□□ 0.22
SCARF1-202ENST00000348987 UBE2KP61086 200 aa16.4■□□□□ 0.22
SCARF1-202ENST00000348987 GGNBP1Q5YKI7 109 aa16.4■□□□□ 0.22
SCARF1-202ENST00000348987 PLXDC2Q6UX71 529 aa16.4■□□□□ 0.22
SCARF1-202ENST00000348987 TMEM182Q6ZP80 229 aaPredicted RBP16.4■□□□□ 0.22
SCARF1-202ENST00000348987 C9orf40Q8IXQ3 194 aa16.4■□□□□ 0.22
SCARF1-202ENST00000348987 APCDD1LQ8NCL9 501 aa16.4■□□□□ 0.22
SCARF1-202ENST00000348987 TMEM68Q96MH6 324 aa16.4■□□□□ 0.22
SCARF1-202ENST00000348987 SLC46A1Q96NT5 459 aa16.4■□□□□ 0.22
SCARF1-202ENST00000348987 GINS3Q9BRX5 216 aa16.4■□□□□ 0.22
SCARF1-202ENST00000348987 C8orf33Q9H7E9 229 aaPredicted RBP16.4■□□□□ 0.22
SCARF1-202ENST00000348987 VSX1Q9NZR4 365 aaPredicted RBP16.4■□□□□ 0.22
SCARF1-202ENST00000348987 TUBD1Q9UJT1 453 aa16.4■□□□□ 0.22
SCARF1-202ENST00000348987 BLACEA4D250 179 aa16.4■□□□□ 0.22
SCARF1-202ENST00000348987 H0YL77 283 aa16.4■□□□□ 0.22
SCARF1-202ENST00000348987 SNRPCP09234 159 aaKnown RBP16.4■□□□□ 0.22
SCARF1-202ENST00000348987 DHPSP49366 369 aaPredicted RBP16.4■□□□□ 0.22
SCARF1-202ENST00000348987 SNU13P55769 128 aaKnown RBP16.4■□□□□ 0.22
SCARF1-202ENST00000348987 HAGHQ16775 308 aa16.4■□□□□ 0.22
SCARF1-202ENST00000348987 OR14K1Q8NGZ2 314 aa16.4■□□□□ 0.22
SCARF1-202ENST00000348987 ADAMTS18Q8TE60 1221 aa16.4■□□□□ 0.22
SCARF1-202ENST00000348987 NUDT16L1Q9BRJ7 211 aaKnown RBP16.4■□□□□ 0.22
SCARF1-202ENST00000348987 SOX7Q9BT81 388 aa16.4■□□□□ 0.22
SCARF1-202ENST00000348987 WASF3Q9UPY6 502 aa16.4■□□□□ 0.22
SCARF1-202ENST00000348987 SPAG17Q6Q759 2223 aa16.4■□□□□ 0.22
SCARF1-202ENST00000348987 XRCC2O43543 280 aa16.39■□□□□ 0.21
SCARF1-202ENST00000348987 TTRP02766 147 aa16.39■□□□□ 0.21
SCARF1-202ENST00000348987 QDPRP09417 244 aa16.39■□□□□ 0.21
SCARF1-202ENST00000348987 ZNF823P16415 610 aa16.39■□□□□ 0.21
SCARF1-202ENST00000348987 P2RY1P47900 373 aa16.39■□□□□ 0.21
SCARF1-202ENST00000348987 FMODQ06828 376 aa16.39■□□□□ 0.21
SCARF1-202ENST00000348987 COL13A1Q5TAT6 717 aaPredicted RBP16.39■□□□□ 0.21
SCARF1-202ENST00000348987 OR5D14Q8NGL3 314 aa16.39■□□□□ 0.21
SCARF1-202ENST00000348987 EMG1Q92979 244 aaKnown RBP16.39■□□□□ 0.21
SCARF1-202ENST00000348987 PLEKHA2Q9HB19 425 aa16.39■□□□□ 0.21
SCARF1-202ENST00000348987 CRLF2Q9HC73 371 aa16.39■□□□□ 0.21
SCARF1-202ENST00000348987 MTCH2Q9Y6C9 303 aa16.39■□□□□ 0.21
SCARF1-202ENST00000348987 H0YIG0 161 aa16.39■□□□□ 0.21
SCARF1-202ENST00000348987 CDC14BO60729 498 aa16.39■□□□□ 0.21
SCARF1-202ENST00000348987 PTBP3O95758 552 aaKnown RBP16.39■□□□□ 0.21
SCARF1-202ENST00000348987 H2BFMP0C1H6 154 aa16.39■□□□□ 0.21
SCARF1-202ENST00000348987 TRGC1P0CF51 173 aa16.39■□□□□ 0.21
SCARF1-202ENST00000348987 OR3A4PP47883 348 aa16.39■□□□□ 0.21
SCARF1-202ENST00000348987 DLK1P80370 383 aa16.39■□□□□ 0.21
SCARF1-202ENST00000348987 C4orf17Q53FE4 359 aa16.39■□□□□ 0.21
SCARF1-202ENST00000348987 ZNF385CQ66K41 422 aaPredicted RBP16.39■□□□□ 0.21
SCARF1-202ENST00000348987 RHBDD1Q8TEB9 315 aa16.39■□□□□ 0.21
SCARF1-202ENST00000348987 ABHD5Q8WTS1 349 aa16.39■□□□□ 0.21
SCARF1-202ENST00000348987 POM121Q96HA1 1249 aa16.39■□□□□ 0.21
SCARF1-202ENST00000348987 PACRGQ96M98 296 aaPredicted RBP16.39■□□□□ 0.21
SCARF1-202ENST00000348987 TXNIPQ9H3M7 391 aa16.39■□□□□ 0.21
SCARF1-202ENST00000348987 SRPK3Q9UPE1 567 aa16.39■□□□□ 0.21
SCARF1-202ENST00000348987 C14orf166Q9Y224 244 aaKnown RBP16.39■□□□□ 0.21
SCARF1-202ENST00000348987 MRPS28Q9Y2Q9 187 aaKnown RBP16.39■□□□□ 0.21
SCARF1-202ENST00000348987 RFNGQ9Y644 331 aa16.39■□□□□ 0.21
SCARF1-202ENST00000348987 ELOA3CA0A087WX78 387 aaPredicted RBP16.38■□□□□ 0.21
SCARF1-202ENST00000348987 FRG2CA6NGY1 282 aa16.38■□□□□ 0.21
SCARF1-202ENST00000348987 MBPP02686 304 aaPredicted RBP16.38■□□□□ 0.21
SCARF1-202ENST00000348987 MYF5P13349 255 aa16.38■□□□□ 0.21
SCARF1-202ENST00000348987 IL2RGP31785 369 aa16.38■□□□□ 0.21
SCARF1-202ENST00000348987 SUCLG1P53597 346 aaKnown RBP16.38■□□□□ 0.21
SCARF1-202ENST00000348987 OR8G1Q15617 311 aa16.38■□□□□ 0.21
SCARF1-202ENST00000348987 DMRTC1Q5HYR2 192 aa16.38■□□□□ 0.21
SCARF1-202ENST00000348987 C16orf47Q6ZP98 133 aaPredicted RBP16.38■□□□□ 0.21
SCARF1-202ENST00000348987 LRRC18Q8N456 261 aa16.38■□□□□ 0.21
SCARF1-202ENST00000348987 FRZBQ92765 325 aa16.38■□□□□ 0.21
SCARF1-202ENST00000348987 MVB12AQ96EY5 273 aa16.38■□□□□ 0.21
SCARF1-202ENST00000348987 DUSP15Q9H1R2 295 aaPredicted RBP16.38■□□□□ 0.21
SCARF1-202ENST00000348987 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.38■□□□□ 0.21
SCARF1-202ENST00000348987 STRAPQ9Y3F4 350 aaKnown RBP16.38■□□□□ 0.21
SCARF1-202ENST00000348987 TMEM150CB9EJG8 249 aa16.38■□□□□ 0.21
SCARF1-202ENST00000348987 PHOX2AO14813 284 aa16.38■□□□□ 0.21
SCARF1-202ENST00000348987 ATXN7O15265 892 aaPredicted RBP16.38■□□□□ 0.21
SCARF1-202ENST00000348987 DIRAS3O95661 229 aa16.38■□□□□ 0.21
SCARF1-202ENST00000348987 HLA-DOBP13765 273 aa16.38■□□□□ 0.21
SCARF1-202ENST00000348987 ASCL1P50553 236 aa16.38■□□□□ 0.21
SCARF1-202ENST00000348987 ACY1Q03154 408 aa16.38■□□□□ 0.21
SCARF1-202ENST00000348987 HIKESHIQ53FT3 197 aa16.38■□□□□ 0.21
SCARF1-202ENST00000348987 HIST2H3PS2Q5TEC6 136 aa16.38■□□□□ 0.21
SCARF1-202ENST00000348987 TMEM59Q9BXS4 323 aa16.38■□□□□ 0.21
SCARF1-202ENST00000348987 TRAV36DV7A0A075B6V5 113 aa16.37■□□□□ 0.21
SCARF1-202ENST00000348987 IGKV3D-11A0A0A0MRZ8 115 aa16.37■□□□□ 0.21
SCARF1-202ENST00000348987 IFNA21P01568 189 aa16.37■□□□□ 0.21
SCARF1-202ENST00000348987 IL11P20809 199 aa16.37■□□□□ 0.21
SCARF1-202ENST00000348987 IL12BP29460 328 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms