RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 HPP00738 406 aa16.55■□□□□ 0.24
UBE3C-201ENST00000348165 MT-ND4LP03901 98 aa16.55■□□□□ 0.24
UBE3C-201ENST00000348165 OR52N4Q8NGI2 321 aa16.55■□□□□ 0.24
UBE3C-201ENST00000348165 OR13G1Q8NGZ3 307 aa16.55■□□□□ 0.24
UBE3C-201ENST00000348165 GNPNAT1Q96EK6 184 aaPredicted RBP16.55■□□□□ 0.24
UBE3C-201ENST00000348165 TMEM231Q9H6L2 316 aa16.55■□□□□ 0.24
UBE3C-201ENST00000348165 ESRP2Q9H6T0 727 aaKnown RBP16.55■□□□□ 0.24
UBE3C-201ENST00000348165 PSENENQ9NZ42 101 aa16.55■□□□□ 0.24
UBE3C-201ENST00000348165 CACNA1EQ15878 2313 aa16.55■□□□□ 0.24
UBE3C-201ENST00000348165 TMEM30CPA0ZSE6 113 aa16.55■□□□□ 0.24
UBE3C-201ENST00000348165 SKA3Q8IX90 412 aa16.55■□□□□ 0.24
UBE3C-201ENST00000348165 PTPMT1Q8WUK0 201 aaPredicted RBP16.55■□□□□ 0.24
UBE3C-201ENST00000348165 LHX4Q969G2 390 aa16.55■□□□□ 0.24
UBE3C-201ENST00000348165 GPR87Q9BY21 358 aa16.55■□□□□ 0.24
UBE3C-201ENST00000348165 KRASP01116 189 aa16.55■□□□□ 0.24
UBE3C-201ENST00000348165 NGFP01138 241 aa16.55■□□□□ 0.24
UBE3C-201ENST00000348165 SSX7Q7RTT5 188 aa16.55■□□□□ 0.24
UBE3C-201ENST00000348165 ZFP62Q8NB50 900 aaPredicted RBP16.55■□□□□ 0.24
UBE3C-201ENST00000348165 M1APQ8TC57 530 aa16.55■□□□□ 0.24
UBE3C-201ENST00000348165 PLA1AQ53H76 456 aa16.55■□□□□ 0.24
UBE3C-201ENST00000348165 BTLAQ7Z6A9 289 aa16.55■□□□□ 0.24
UBE3C-201ENST00000348165 TMEM229BQ8NBD8 167 aa16.55■□□□□ 0.24
UBE3C-201ENST00000348165 TMEM52Q8NDY8 209 aa16.55■□□□□ 0.24
UBE3C-201ENST00000348165 OR4D10Q8NGI6 311 aa16.55■□□□□ 0.24
UBE3C-201ENST00000348165 FAAP24Q9BTP7 215 aa16.55■□□□□ 0.24
UBE3C-201ENST00000348165 C12orf10Q9HB07 376 aa16.55■□□□□ 0.24
UBE3C-201ENST00000348165 EXOGQ9Y2C4 368 aaKnown RBP16.55■□□□□ 0.24
UBE3C-201ENST00000348165 NAT2P11245 290 aa16.54■□□□□ 0.24
UBE3C-201ENST00000348165 PEBP1P30086 187 aaKnown RBP16.54■□□□□ 0.24
UBE3C-201ENST00000348165 LRRC10Q5BKY1 277 aa16.54■□□□□ 0.24
UBE3C-201ENST00000348165 FAM74A1Q5RGS3 127 aa16.54■□□□□ 0.24
UBE3C-201ENST00000348165 COL13A1Q5TAT6 717 aaPredicted RBP16.54■□□□□ 0.24
UBE3C-201ENST00000348165 ARRDC1Q8N5I2 433 aa16.54■□□□□ 0.24
UBE3C-201ENST00000348165 CCL17Q92583 94 aa16.54■□□□□ 0.24
UBE3C-201ENST00000348165 ZNF764Q96H86 408 aaPredicted RBP16.54■□□□□ 0.24
UBE3C-201ENST00000348165 NQO2P16083 231 aa16.54■□□□□ 0.24
UBE3C-201ENST00000348165 SDHBP21912 280 aa16.54■□□□□ 0.24
UBE3C-201ENST00000348165 LRRTM1Q86UE6 522 aa16.54■□□□□ 0.24
UBE3C-201ENST00000348165 FAM58AQ8N1B3 248 aa16.54■□□□□ 0.24
UBE3C-201ENST00000348165 NMES1Q9C002 83 aa16.54■□□□□ 0.24
UBE3C-201ENST00000348165 PLEKHA2Q9HB19 425 aa16.54■□□□□ 0.24
UBE3C-201ENST00000348165 CACNA1IQ9P0X4 2223 aa16.54■□□□□ 0.24
UBE3C-201ENST00000348165 CCL3P10147 92 aa16.54■□□□□ 0.24
UBE3C-201ENST00000348165 DTYMKP23919 212 aa16.54■□□□□ 0.24
UBE3C-201ENST00000348165 ZBTB25P24278 435 aa16.54■□□□□ 0.24
UBE3C-201ENST00000348165 MAGEA5P43359 124 aa16.54■□□□□ 0.24
UBE3C-201ENST00000348165 UBE2G1P62253 170 aa16.54■□□□□ 0.24
UBE3C-201ENST00000348165 TMEM128Q5BJH2 165 aa16.54■□□□□ 0.24
UBE3C-201ENST00000348165 SLC36A1Q7Z2H8 476 aa16.54■□□□□ 0.24
UBE3C-201ENST00000348165 UMAD1C9J7I0 102 aa16.54■□□□□ 0.24
UBE3C-201ENST00000348165 M0R1X1 148 aa16.54■□□□□ 0.24
UBE3C-201ENST00000348165 C6orf201Q7Z4U5 140 aa16.54■□□□□ 0.24
UBE3C-201ENST00000348165 ATG4DQ86TL0 474 aaPredicted RBP16.54■□□□□ 0.24
UBE3C-201ENST00000348165 PPP5D1E7EU14 171 aa16.53■□□□□ 0.24
UBE3C-201ENST00000348165 CD300CQ08708 224 aa16.53■□□□□ 0.24
UBE3C-201ENST00000348165 MOB3BQ86TA1 216 aa16.53■□□□□ 0.24
UBE3C-201ENST00000348165 ERGIC1Q969X5 290 aa16.53■□□□□ 0.24
UBE3C-201ENST00000348165 ZNF275Q9NSD4 429 aaPredicted RBP16.53■□□□□ 0.24
UBE3C-201ENST00000348165 EP300Q09472 2414 aaPredicted RBP16.53■□□□□ 0.24
UBE3C-201ENST00000348165 CACNA1GO43497 2377 aa16.53■□□□□ 0.24
UBE3C-201ENST00000348165 DEFB108AA8MXU0 73 aa16.53■□□□□ 0.24
UBE3C-201ENST00000348165 FOXS1O43638 330 aa16.53■□□□□ 0.24
UBE3C-201ENST00000348165 OR7C2O60412 319 aa16.53■□□□□ 0.24
UBE3C-201ENST00000348165 DHODHQ02127 395 aa16.53■□□□□ 0.24
UBE3C-201ENST00000348165 SSBP1Q04837 148 aaKnown RBP16.53■□□□□ 0.24
UBE3C-201ENST00000348165 TMEM272A0A1B0GTI8 110 aa16.53■□□□□ 0.24
UBE3C-201ENST00000348165 GPR31O00270 319 aa16.53■□□□□ 0.24
UBE3C-201ENST00000348165 C21orf62-AS1Q17RA5 79 aa16.53■□□□□ 0.24
UBE3C-201ENST00000348165 OR6X1Q8NH79 312 aa16.53■□□□□ 0.24
UBE3C-201ENST00000348165 OR5V1Q9UGF6 321 aa16.53■□□□□ 0.24
UBE3C-201ENST00000348165 DVL1O14640 695 aa16.53■□□□□ 0.24
UBE3C-201ENST00000348165 TMEM127O75204 238 aa16.53■□□□□ 0.24
UBE3C-201ENST00000348165 TMIGD3P0DMS9 266 aaPredicted RBP16.53■□□□□ 0.24
UBE3C-201ENST00000348165 DVL1P1P54792 670 aaPredicted RBP16.53■□□□□ 0.24
UBE3C-201ENST00000348165 Q8IYB0 196 aa16.53■□□□□ 0.24
UBE3C-201ENST00000348165 TRBV5-3A0A0A0MS03 114 aa16.53■□□□□ 0.24
UBE3C-201ENST00000348165 CLEC18AA5D8T8 446 aa16.53■□□□□ 0.24
UBE3C-201ENST00000348165 TRAF3IP2O43734 574 aaPredicted RBP16.53■□□□□ 0.24
UBE3C-201ENST00000348165 LSM11P83369 360 aaKnown RBP eCLIP16.53■□□□□ 0.24
UBE3C-201ENST00000348165 PMP22Q01453 160 aa16.53■□□□□ 0.24
UBE3C-201ENST00000348165 CDONQ4KMG0 1287 aa16.53■□□□□ 0.24
UBE3C-201ENST00000348165 BAP18Q8IXM2 172 aa16.53■□□□□ 0.24
UBE3C-201ENST00000348165 CLEC18CQ8NCF0 446 aa16.53■□□□□ 0.24
UBE3C-201ENST00000348165 AQP7P3A6NL99 342 aa16.52■□□□□ 0.24
UBE3C-201ENST00000348165 CST7O76096 145 aa16.52■□□□□ 0.24
UBE3C-201ENST00000348165 ETFRF1Q6IPR1 90 aa16.52■□□□□ 0.24
UBE3C-201ENST00000348165 TMEM108Q6UXF1 575 aa16.52■□□□□ 0.24
UBE3C-201ENST00000348165 DBX2Q6ZNG2 339 aa16.52■□□□□ 0.24
UBE3C-201ENST00000348165 ERRFI1Q9UJM3 462 aaPredicted RBP16.52■□□□□ 0.24
UBE3C-201ENST00000348165 HIST1H1DP16402 221 aaKnown RBP16.52■□□□□ 0.24
UBE3C-201ENST00000348165 OR3A4PP47883 348 aa16.52■□□□□ 0.24
UBE3C-201ENST00000348165 TUSC5Q8IXB3 177 aa16.52■□□□□ 0.24
UBE3C-201ENST00000348165 CIB3Q96Q77 187 aaPredicted RBP16.52■□□□□ 0.24
UBE3C-201ENST00000348165 TMPRSS13Q9BYE2 586 aa16.52■□□□□ 0.24
UBE3C-201ENST00000348165 LAMP3Q9UQV4 416 aa16.52■□□□□ 0.24
UBE3C-201ENST00000348165 COL24A1Q17RW2 1714 aa16.52■□□□□ 0.24
UBE3C-201ENST00000348165 TCRBV16S1A1N1A0A5B0 115 aa16.52■□□□□ 0.23
UBE3C-201ENST00000348165 LIPT2A6NK58 231 aa16.52■□□□□ 0.23
UBE3C-201ENST00000348165 C3orf80F5H4A9 247 aa16.52■□□□□ 0.23
UBE3C-201ENST00000348165 AARDQ4LEZ3 155 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms