RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 CSNK2A3Q8NEV1 391 aa13.96□□□□□ -0.18
HMGA1-202ENST00000347617 STT3BQ8TCJ2 826 aa13.96□□□□□ -0.18
HMGA1-202ENST00000347617 ASB10Q8WXI3 467 aa13.96□□□□□ -0.18
HMGA1-202ENST00000347617 TSLPQ969D9 159 aa13.96□□□□□ -0.18
HMGA1-202ENST00000347617 ADAT3Q96EY9 351 aaPredicted RBP13.96□□□□□ -0.18
HMGA1-202ENST00000347617 SIRT7Q9NRC8 400 aa13.96□□□□□ -0.18
HMGA1-202ENST00000347617 FREM3P0C091 2139 aa13.96□□□□□ -0.18
HMGA1-202ENST00000347617 ZDBF2Q9HCK1 2354 aa13.95□□□□□ -0.18
HMGA1-202ENST00000347617 TRBV23-1A0A0A0MS06 115 aa13.95□□□□□ -0.18
HMGA1-202ENST00000347617 A0A0A6YYD4 124 aa13.95□□□□□ -0.18
HMGA1-202ENST00000347617 VSTM2BA6NLU5 285 aa13.95□□□□□ -0.18
HMGA1-202ENST00000347617 SERPINE3A8MV23 424 aa13.95□□□□□ -0.18
HMGA1-202ENST00000347617 NPIPA5E9PKD4 350 aa13.95□□□□□ -0.18
HMGA1-202ENST00000347617 ST8SIA5O15466 376 aa13.95□□□□□ -0.18
HMGA1-202ENST00000347617 GMFGO60234 142 aa13.95□□□□□ -0.18
HMGA1-202ENST00000347617 MPLP40238 635 aa13.95□□□□□ -0.18
HMGA1-202ENST00000347617 PLAC9Q5JTB6 97 aa13.95□□□□□ -0.18
HMGA1-202ENST00000347617 C1orf189Q5VU69 101 aa13.95□□□□□ -0.18
HMGA1-202ENST00000347617 OR13C9Q8NGT0 318 aa13.95□□□□□ -0.18
HMGA1-202ENST00000347617 FBXO17Q96EF6 278 aa13.95□□□□□ -0.18
HMGA1-202ENST00000347617 NICN1Q9BSH3 213 aa13.95□□□□□ -0.18
HMGA1-202ENST00000347617 RSRP1Q9BUV0 290 aa13.95□□□□□ -0.18
HMGA1-202ENST00000347617 NXF5Q9H1B4 397 aaKnown RBP13.95□□□□□ -0.18
HMGA1-202ENST00000347617 EHFQ9NZC4 300 aa13.95□□□□□ -0.18
HMGA1-202ENST00000347617 COPS7AQ9UBW8 275 aa13.95□□□□□ -0.18
HMGA1-202ENST00000347617 NPIPA1Q9UND3 350 aa13.95□□□□□ -0.18
HMGA1-202ENST00000347617 ADAMTS9Q9P2N4 1935 aa13.95□□□□□ -0.18
HMGA1-202ENST00000347617 IL12BP29460 328 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 ALDH3B1P43353 468 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 RBP2P50120 134 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 OR2B8PP59922 312 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 RPS23P62266 143 aaKnown RBP13.94□□□□□ -0.18
HMGA1-202ENST00000347617 ZNF616Q08AN1 781 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 SPEM2Q0P670 501 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 IL13RA2Q14627 380 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 SOHLH1Q5JUK2 328 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 PLA2G2CQ5R387 149 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 C1QL3Q5VWW1 255 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 FAM219AQ8IW50 185 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 SUMF2Q8NBJ7 301 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 AGBL5Q8NDL9 886 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 RNASE11Q8TAA1 199 aaKnown RBP13.94□□□□□ -0.18
HMGA1-202ENST00000347617 GTF3AQ92664 365 aaKnown RBP13.94□□□□□ -0.18
HMGA1-202ENST00000347617 SLAMF6Q96DU3 332 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 GALNT14Q96FL9 552 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 C1orf147Q96MC9 270 aaPredicted RBP13.94□□□□□ -0.18
HMGA1-202ENST00000347617 KCNK17Q96T54 332 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 OR11A1Q9GZK7 315 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 OR8D2Q9GZM6 311 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 OR10A2Q9H208 303 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 PTGES2Q9H7Z7 377 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 SOCS1O15524 211 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 GLRA1P23415 457 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 PTGER4P35408 488 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 EFNA3P52797 238 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 SNU13P55769 128 aaKnown RBP13.94□□□□□ -0.18
HMGA1-202ENST00000347617 TMEM50BP56557 158 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 CHRFAM7AQ494W8 412 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 ZNF610Q8N9Z0 462 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 SLC38A9Q8NBW4 561 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 OR2I1PQ8NGU4 316 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 CD300LFQ8TDQ1 290 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 NTNG2Q96CW9 530 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 GNRHR2Q96P88 292 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 NRSN2Q9GZP1 204 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 CENPMQ9NSP4 180 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 FAM86C1Q9NVL1 165 aa13.94□□□□□ -0.18
HMGA1-202ENST00000347617 COL6A3P12111 3177 aa13.93□□□□□ -0.18
HMGA1-202ENST00000347617 A0A1W2PPE2 198 aa13.93□□□□□ -0.18
HMGA1-202ENST00000347617 CRYM-AS1A6NIL9 109 aa13.93□□□□□ -0.18
HMGA1-202ENST00000347617 RPL36A-HNRNPH2H7BZ11 118 aa13.93□□□□□ -0.18
HMGA1-202ENST00000347617 NME2P1O60361 137 aa13.93□□□□□ -0.18
HMGA1-202ENST00000347617 HIST1H1BP16401 226 aaKnown RBP13.93□□□□□ -0.18
HMGA1-202ENST00000347617 ID4P47928 161 aa13.93□□□□□ -0.18
HMGA1-202ENST00000347617 NUBP1P53384 320 aa13.93□□□□□ -0.18
HMGA1-202ENST00000347617 HIKESHIQ53FT3 197 aa13.93□□□□□ -0.18
HMGA1-202ENST00000347617 NCMAPQ5T1S8 102 aa13.93□□□□□ -0.18
HMGA1-202ENST00000347617 HIST2H3PS2Q5TEC6 136 aa13.93□□□□□ -0.18
HMGA1-202ENST00000347617 HLA-DQA1Q5Y7H0 255 aa13.93□□□□□ -0.18
HMGA1-202ENST00000347617 REC114Q7Z4M0 266 aa13.93□□□□□ -0.18
HMGA1-202ENST00000347617 SULF2Q8IWU5 870 aa13.93□□□□□ -0.18
HMGA1-202ENST00000347617 OR5AS1Q8N127 324 aa13.93□□□□□ -0.18
HMGA1-202ENST00000347617 ZNF441Q8N8Z8 693 aa13.93□□□□□ -0.18
HMGA1-202ENST00000347617 MAFIPQ8WZ33 124 aa13.93□□□□□ -0.18
HMGA1-202ENST00000347617 ZNF524Q96C55 264 aa13.93□□□□□ -0.18
HMGA1-202ENST00000347617 MUCL1Q96DR8 90 aa13.93□□□□□ -0.18
HMGA1-202ENST00000347617 DECR2Q9NUI1 292 aa13.93□□□□□ -0.18
HMGA1-202ENST00000347617 KCNIP3Q9Y2W7 256 aa13.93□□□□□ -0.18
HMGA1-202ENST00000347617 ARGFXA6NJG6 315 aa13.92□□□□□ -0.18
HMGA1-202ENST00000347617 NDUFS6O75380 124 aaKnown RBP13.92□□□□□ -0.18
HMGA1-202ENST00000347617 MPZL1O95297 269 aa13.92□□□□□ -0.18
HMGA1-202ENST00000347617 NUDT14O95848 222 aa13.92□□□□□ -0.18
HMGA1-202ENST00000347617 PRH1P02810 166 aa13.92□□□□□ -0.18
HMGA1-202ENST00000347617 CCL1P22362 96 aa13.92□□□□□ -0.18
HMGA1-202ENST00000347617 RPS10P46783 165 aaKnown RBP13.92□□□□□ -0.18
HMGA1-202ENST00000347617 PYY3Q5JQD4 70 aa13.92□□□□□ -0.18
HMGA1-202ENST00000347617 OTPQ5XKR4 325 aa13.92□□□□□ -0.18
HMGA1-202ENST00000347617 GGNBP1Q5YKI7 109 aa13.92□□□□□ -0.18
HMGA1-202ENST00000347617 ZNF321PQ8N8H1 164 aa13.92□□□□□ -0.18
HMGA1-202ENST00000347617 TMEM234Q8WY98 164 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms