RNA–Protein interactions for RNA: ENST00000344937.11

CLCN2-202, Transcript of chloride voltage-gated channel 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLCN2, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-202ENST00000344937 SP6Q3SY56 376 aa13.8□□□□□ -0.2
CLCN2-202ENST00000344937 FAM69BQ5VUD6 431 aa13.8□□□□□ -0.2
CLCN2-202ENST00000344937 TCEAL6Q6IPX3 200 aa13.8□□□□□ -0.2
CLCN2-202ENST00000344937 GRINAQ7Z429 371 aa13.8□□□□□ -0.2
CLCN2-202ENST00000344937 NKAIN3Q8N8D7 197 aa13.8□□□□□ -0.2
CLCN2-202ENST00000344937 SEMA6DQ8NFY4 1073 aa13.8□□□□□ -0.2
CLCN2-202ENST00000344937 VN1R1Q9GZP7 353 aa13.8□□□□□ -0.2
CLCN2-202ENST00000344937 LPAR5Q9H1C0 372 aa13.8□□□□□ -0.2
CLCN2-202ENST00000344937 SEMA5BQ9P283 1151 aa13.8□□□□□ -0.2
CLCN2-202ENST00000344937 RALGAPA1Q6GYQ0 2036 aa13.8□□□□□ -0.2
CLCN2-202ENST00000344937 IGHV5-10-1A0A0J9YXX1 117 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 ALG1L2C9J202 215 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 MT-ATP6P00846 226 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 OR8U9P0C7N5 309 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 NR2C1P13056 603 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 FSTP19883 344 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 RSU1Q15404 277 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 C1QL2Q7Z5L3 287 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 BATF2Q8N1L9 274 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 OR8U1Q8NH10 309 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 ZDHHC8Q9ULC8 765 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 AMDHD2Q9Y303 409 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 FLVCR1Q9Y5Y0 555 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 C1QL1O75973 258 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 KLK2P20151 261 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 SNU13P55769 128 aaKnown RBP13.79□□□□□ -0.2
CLCN2-202ENST00000344937 NDUFA6P56556 154 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 TMEM50BP56557 158 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 NAAAQ02083 359 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 BRICD5Q6PL45 260 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 ZNF775Q96BV0 537 aaPredicted RBP13.79□□□□□ -0.2
CLCN2-202ENST00000344937 SMIM8Q96KF7 97 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 HDHD3Q9BSH5 251 aaPredicted RBP13.79□□□□□ -0.2
CLCN2-202ENST00000344937 MRPL37Q9BZE1 423 aaKnown RBP13.79□□□□□ -0.2
CLCN2-202ENST00000344937 ADAMTS20P59510 1910 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 IGKV3D-11A0A0A0MRZ8 115 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 A0A1W2PPE2 198 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 F5H5K5 113 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 IGKV3-11P04433 115 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 PKIAP61925 76 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 IAH1Q2TAA2 248 aaPredicted RBP13.79□□□□□ -0.2
CLCN2-202ENST00000344937 PHF19Q5T6S3 580 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 Q6ZRG5 221 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 HOGA1Q86XE5 327 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 ZNF283Q8N7M2 679 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 OR10S1Q8NGN2 331 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 TOMM40LQ969M1 308 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 CCDC74BQ96LY2 380 aa13.79□□□□□ -0.2
CLCN2-202ENST00000344937 CACNA1HO95180 2353 aa13.78□□□□□ -0.2
CLCN2-202ENST00000344937 BLACEA4D250 179 aa13.78□□□□□ -0.2
CLCN2-202ENST00000344937 SRSF10O75494 262 aaKnown RBP13.78□□□□□ -0.2
CLCN2-202ENST00000344937 GABRR1P24046 479 aa13.78□□□□□ -0.2
CLCN2-202ENST00000344937 ZNF121P58317 390 aaPredicted RBP13.78□□□□□ -0.2
CLCN2-202ENST00000344937 RAB4BP61018 213 aa13.78□□□□□ -0.2
CLCN2-202ENST00000344937 SUPT4H1P63272 117 aaKnown RBP13.78□□□□□ -0.2
CLCN2-202ENST00000344937 USF2Q15853 346 aaPredicted RBP13.78□□□□□ -0.2
CLCN2-202ENST00000344937 ACTBL2Q562R1 376 aa13.78□□□□□ -0.2
CLCN2-202ENST00000344937 MVB12AQ96EY5 273 aa13.78□□□□□ -0.2
CLCN2-202ENST00000344937 CDC6Q99741 560 aa13.78□□□□□ -0.2
CLCN2-202ENST00000344937 AKIRIN1Q9H9L7 192 aaPredicted RBP13.78□□□□□ -0.2
CLCN2-202ENST00000344937 FAM206AQ9NX38 181 aa13.78□□□□□ -0.2
CLCN2-202ENST00000344937 TP53TG5Q9Y2B4 290 aa13.78□□□□□ -0.2
CLCN2-202ENST00000344937 IFNA17P01571 189 aa13.78□□□□□ -0.2
CLCN2-202ENST00000344937 BLVRBP30043 206 aaPredicted RBP13.78□□□□□ -0.2
CLCN2-202ENST00000344937 FOXF1Q12946 379 aa13.78□□□□□ -0.2
CLCN2-202ENST00000344937 OR2AJ1Q8NGZ0 328 aa13.78□□□□□ -0.2
CLCN2-202ENST00000344937 OR13G1Q8NGZ3 307 aa13.78□□□□□ -0.2
CLCN2-202ENST00000344937 ASB10Q8WXI3 467 aa13.78□□□□□ -0.2
CLCN2-202ENST00000344937 CCNL2Q96S94 520 aaPredicted RBP13.78□□□□□ -0.2
CLCN2-202ENST00000344937 KPTNQ9Y664 436 aa13.78□□□□□ -0.2
CLCN2-202ENST00000344937 SHANK1Q9Y566 2161 aa13.78□□□□□ -0.2
CLCN2-202ENST00000344937 PRRC2CQ9Y520 2896 aaKnown RBP13.78□□□□□ -0.2
CLCN2-202ENST00000344937 FAM221AA4D161 298 aa13.77□□□□□ -0.2
CLCN2-202ENST00000344937 XRCC2O43543 280 aa13.77□□□□□ -0.2
CLCN2-202ENST00000344937 CLRN1P58418 232 aa13.77□□□□□ -0.2
CLCN2-202ENST00000344937 DNM1P34Q6PK57 102 aa13.77□□□□□ -0.2
CLCN2-202ENST00000344937 H1FNTQ75WM6 255 aaPredicted RBP13.77□□□□□ -0.2
CLCN2-202ENST00000344937 OR56B1Q8NGI3 324 aa13.77□□□□□ -0.2
CLCN2-202ENST00000344937 IFI44Q8TCB0 444 aa13.77□□□□□ -0.2
CLCN2-202ENST00000344937 DAZLQ92904 295 aaKnown RBP13.77□□□□□ -0.2
CLCN2-202ENST00000344937 PIGTQ969N2 578 aa13.77□□□□□ -0.2
CLCN2-202ENST00000344937 OCIAD1Q9NX40 245 aa13.77□□□□□ -0.2
CLCN2-202ENST00000344937 SLC2A8Q9NY64 477 aa13.77□□□□□ -0.2
CLCN2-202ENST00000344937 KLRF1Q9NZS2 232 aa13.77□□□□□ -0.2
CLCN2-202ENST00000344937 A0A0A6YYH2 397 aa13.77□□□□□ -0.21
CLCN2-202ENST00000344937 A6NJ64 397 aa13.77□□□□□ -0.21
CLCN2-202ENST00000344937 HSPB2A8KAH6 182 aa13.77□□□□□ -0.21
CLCN2-202ENST00000344937 TSTD3H0UI37 97 aa13.77□□□□□ -0.21
CLCN2-202ENST00000344937 TSPAN2O60636 221 aa13.77□□□□□ -0.21
CLCN2-202ENST00000344937 IFNA10P01566 189 aa13.77□□□□□ -0.21
CLCN2-202ENST00000344937 SNRPCP09234 159 aaKnown RBP13.77□□□□□ -0.21
CLCN2-202ENST00000344937 OR8G1Q15617 311 aa13.77□□□□□ -0.21
CLCN2-202ENST00000344937 HSPB2Q16082 182 aa13.77□□□□□ -0.21
CLCN2-202ENST00000344937 TSPO2Q5TGU0 170 aa13.77□□□□□ -0.21
CLCN2-202ENST00000344937 CARFQ8N187 725 aa13.77□□□□□ -0.21
CLCN2-202ENST00000344937 STT3BQ8TCJ2 826 aa13.77□□□□□ -0.21
CLCN2-202ENST00000344937 REEP6Q96HR9 211 aa13.77□□□□□ -0.21
CLCN2-202ENST00000344937 EIF5A2Q9GZV4 153 aaKnown RBP13.77□□□□□ -0.21
CLCN2-202ENST00000344937 DOK5Q9P104 306 aa13.77□□□□□ -0.21
CLCN2-202ENST00000344937 MMACHCQ9Y4U1 282 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms