RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 PRB3Q04118 309 aaPredicted RBP11.87□□□□□ -0.51
HMGN3-202ENST00000344726 UBE2V2Q15819 145 aa11.87□□□□□ -0.51
HMGN3-202ENST00000344726 CDONQ4KMG0 1287 aa11.87□□□□□ -0.51
HMGN3-202ENST00000344726 LRRC10Q5BKY1 277 aa11.87□□□□□ -0.51
HMGN3-202ENST00000344726 MEDAGQ5VYS4 303 aa11.87□□□□□ -0.51
HMGN3-202ENST00000344726 ACP7Q6ZNF0 438 aa11.87□□□□□ -0.51
HMGN3-202ENST00000344726 VMO1Q7Z5L0 202 aa11.87□□□□□ -0.51
HMGN3-202ENST00000344726 CALHM1Q8IU99 346 aa11.87□□□□□ -0.51
HMGN3-202ENST00000344726 PDZD9Q8IXQ8 264 aa11.87□□□□□ -0.51
HMGN3-202ENST00000344726 ENTHD1Q8IYW4 607 aa11.87□□□□□ -0.51
HMGN3-202ENST00000344726 RDH10Q8IZV5 341 aa11.87□□□□□ -0.51
HMGN3-202ENST00000344726 BATF2Q8N1L9 274 aa11.87□□□□□ -0.51
HMGN3-202ENST00000344726 Q8N7P7 452 aa11.87□□□□□ -0.51
HMGN3-202ENST00000344726 POC1AQ8NBT0 407 aa11.87□□□□□ -0.51
HMGN3-202ENST00000344726 ZNRF1Q8ND25 227 aa11.87□□□□□ -0.51
HMGN3-202ENST00000344726 C8orf46Q8TAG6 207 aa11.87□□□□□ -0.51
HMGN3-202ENST00000344726 ZNF671Q8TAW3 534 aa11.87□□□□□ -0.51
HMGN3-202ENST00000344726 TMIGD2Q96BF3 282 aa11.87□□□□□ -0.51
HMGN3-202ENST00000344726 ONECUT1Q9UBC0 465 aa11.87□□□□□ -0.51
HMGN3-202ENST00000344726 SLC25A10Q9UBX3 287 aaPredicted RBP11.87□□□□□ -0.51
HMGN3-202ENST00000344726 GMPPBQ9Y5P6 360 aa11.87□□□□□ -0.51
HMGN3-202ENST00000344726 KPTNQ9Y664 436 aa11.87□□□□□ -0.51
HMGN3-202ENST00000344726 IGKV1-27A0A075B6S5 117 aa11.86□□□□□ -0.51
HMGN3-202ENST00000344726 IGHV1-69DA0A0B4J2H0 117 aa11.86□□□□□ -0.51
HMGN3-202ENST00000344726 A0A1B0GVI7 797 aa11.86□□□□□ -0.51
HMGN3-202ENST00000344726 LOC107986453A0A1B0GWG9 222 aa11.86□□□□□ -0.51
HMGN3-202ENST00000344726 ANKRD61A6NGH8 418 aa11.86□□□□□ -0.51
HMGN3-202ENST00000344726 NOS1APO75052 506 aaPredicted RBP11.86□□□□□ -0.51
HMGN3-202ENST00000344726 IGHV1-69P01742 117 aa11.86□□□□□ -0.51
HMGN3-202ENST00000344726 MPZP25189 248 aa11.86□□□□□ -0.51
HMGN3-202ENST00000344726 OR12D2P58182 307 aa11.86□□□□□ -0.51
HMGN3-202ENST00000344726 BPIFB3P59826 476 aa11.86□□□□□ -0.51
HMGN3-202ENST00000344726 NANOS3P60323 173 aaKnown RBP11.86□□□□□ -0.51
HMGN3-202ENST00000344726 GUCA2AQ02747 115 aa11.86□□□□□ -0.51
HMGN3-202ENST00000344726 ZNF91Q05481 1191 aa11.86□□□□□ -0.51
HMGN3-202ENST00000344726 PDCD1Q15116 288 aa11.86□□□□□ -0.51
HMGN3-202ENST00000344726 ZBTB49Q6ZSB9 765 aa11.86□□□□□ -0.51
HMGN3-202ENST00000344726 ANGPTL5Q86XS5 388 aa11.86□□□□□ -0.51
HMGN3-202ENST00000344726 ZNF573Q86YE8 665 aa11.86□□□□□ -0.51
HMGN3-202ENST00000344726 C10orf67Q8IYJ2 551 aa11.86□□□□□ -0.51
HMGN3-202ENST00000344726 CD177Q8N6Q3 437 aa11.86□□□□□ -0.51
HMGN3-202ENST00000344726 OR2G2Q8NGZ5 317 aa11.86□□□□□ -0.51
HMGN3-202ENST00000344726 TRMT10AQ8TBZ6 339 aaKnown RBP11.86□□□□□ -0.51
HMGN3-202ENST00000344726 NPRL2Q8WTW4 380 aa11.86□□□□□ -0.51
HMGN3-202ENST00000344726 H1FXQ92522 213 aaKnown RBP11.86□□□□□ -0.51
HMGN3-202ENST00000344726 SLC25A28Q96A46 364 aa11.86□□□□□ -0.51
HMGN3-202ENST00000344726 LGALS12Q96DT0 336 aa11.86□□□□□ -0.51
HMGN3-202ENST00000344726 MED30Q96HR3 178 aa11.86□□□□□ -0.51
HMGN3-202ENST00000344726 ZMAT3Q9HA38 289 aaKnown RBP11.86□□□□□ -0.51
HMGN3-202ENST00000344726 SIRT7Q9NRC8 400 aa11.86□□□□□ -0.51
HMGN3-202ENST00000344726 EXOGQ9Y2C4 368 aaKnown RBP11.86□□□□□ -0.51
HMGN3-202ENST00000344726 CMYA5Q8N3K9 4069 aa11.86□□□□□ -0.51
HMGN3-202ENST00000344726 DAPL1A0PJW8 107 aa11.85□□□□□ -0.51
HMGN3-202ENST00000344726 RFPL4AA6NLU0 287 aa11.85□□□□□ -0.51
HMGN3-202ENST00000344726 RFPL4AL1F8VTS6 287 aa11.85□□□□□ -0.51
HMGN3-202ENST00000344726 DBTP11182 482 aaKnown RBP11.85□□□□□ -0.51
HMGN3-202ENST00000344726 NDUFB7P17568 137 aa11.85□□□□□ -0.51
HMGN3-202ENST00000344726 CEBPDP49716 269 aaPredicted RBP11.85□□□□□ -0.51
HMGN3-202ENST00000344726 CAV3P56539 151 aa11.85□□□□□ -0.51
HMGN3-202ENST00000344726 ERVK11-1P61568 191 aa11.85□□□□□ -0.51
HMGN3-202ENST00000344726 ACTC1P68032 377 aa11.85□□□□□ -0.51
HMGN3-202ENST00000344726 ACTA1P68133 377 aa11.85□□□□□ -0.51
HMGN3-202ENST00000344726 Q6YL49 198 aa11.85□□□□□ -0.51
HMGN3-202ENST00000344726 FAM220AQ7Z4H9 259 aa11.85□□□□□ -0.51
HMGN3-202ENST00000344726 KIR3DL3Q8N743 410 aa11.85□□□□□ -0.51
HMGN3-202ENST00000344726 RHOXF1Q8NHV9 184 aa11.85□□□□□ -0.51
HMGN3-202ENST00000344726 GATAD2BQ8WXI9 593 aa11.85□□□□□ -0.51
HMGN3-202ENST00000344726 SDSLQ96GA7 329 aa11.85□□□□□ -0.51
HMGN3-202ENST00000344726 NRIP2Q9BQI9 281 aa11.85□□□□□ -0.51
HMGN3-202ENST00000344726 ZNF747Q9BV97 191 aa11.85□□□□□ -0.51
HMGN3-202ENST00000344726 CHST5Q9GZS9 411 aa11.85□□□□□ -0.51
HMGN3-202ENST00000344726 PLEKHA1Q9HB21 404 aa11.85□□□□□ -0.51
HMGN3-202ENST00000344726 HES4Q9HCC6 221 aa11.85□□□□□ -0.51
HMGN3-202ENST00000344726 AMBNQ9NP70 447 aa11.85□□□□□ -0.51
HMGN3-202ENST00000344726 TNFRSF19Q9NS68 423 aa11.85□□□□□ -0.51
HMGN3-202ENST00000344726 FAM118AQ9NWS6 357 aa11.85□□□□□ -0.51
HMGN3-202ENST00000344726 RASL12Q9NYN1 266 aa11.85□□□□□ -0.51
HMGN3-202ENST00000344726 FRRS1LQ9P0K9 344 aa11.85□□□□□ -0.51
HMGN3-202ENST00000344726 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.85□□□□□ -0.51
HMGN3-202ENST00000344726 MYRFQ9Y2G1 1151 aa11.85□□□□□ -0.51
HMGN3-202ENST00000344726 MGAM2Q2M2H8 2515 aa11.84□□□□□ -0.51
HMGN3-202ENST00000344726 A0A0U1RQK1 487 aa11.84□□□□□ -0.51
HMGN3-202ENST00000344726 LOC100130705A0A1B0GUX0 176 aa11.84□□□□□ -0.51
HMGN3-202ENST00000344726 FAM230AA0A1W2PPH8 454 aa11.84□□□□□ -0.51
HMGN3-202ENST00000344726 F8VVB4 439 aa11.84□□□□□ -0.51
HMGN3-202ENST00000344726 F8VWA3 439 aa11.84□□□□□ -0.51
HMGN3-202ENST00000344726 RNASEK-C17orf49H0YIS7 233 aa11.84□□□□□ -0.51
HMGN3-202ENST00000344726 SLC16A6O15403 523 aa11.84□□□□□ -0.51
HMGN3-202ENST00000344726 MELTFP08582 738 aa11.84□□□□□ -0.51
HMGN3-202ENST00000344726 UBCP0CG48 685 aaKnown RBP11.84□□□□□ -0.51
HMGN3-202ENST00000344726 FOXL1Q12952 345 aa11.84□□□□□ -0.51
HMGN3-202ENST00000344726 KLRD1Q13241 179 aa11.84□□□□□ -0.51
HMGN3-202ENST00000344726 SMIM21Q3B7S5 101 aa11.84□□□□□ -0.51
HMGN3-202ENST00000344726 FDX2Q6P4F2 183 aa11.84□□□□□ -0.51
HMGN3-202ENST00000344726 ACBD7Q8N6N7 88 aa11.84□□□□□ -0.51
HMGN3-202ENST00000344726 TMEM185AQ8NFB2 350 aa11.84□□□□□ -0.51
HMGN3-202ENST00000344726 OR10AC1Q8NH08 325 aa11.84□□□□□ -0.51
HMGN3-202ENST00000344726 APH1BQ8WW43 257 aa11.84□□□□□ -0.51
HMGN3-202ENST00000344726 TNFRSF14Q92956 283 aa11.84□□□□□ -0.51
HMGN3-202ENST00000344726 ADAT3Q96EY9 351 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms