RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 NAA60Q9H7X0 242 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 GPR84Q9NQS5 396 aa8.48□□□□□ -1.05
HOXA1-201ENST00000343060 DHRS7CA6NNS2 312 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 ZNF727A8MUV8 499 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 MSTNO14793 375 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 PHOX2AO14813 284 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 HSPB1P04792 205 aaKnown RBP8.47□□□□□ -1.05
HOXA1-201ENST00000343060 SERPINA2P20848 420 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 BLVRBP30043 206 aaPredicted RBP8.47□□□□□ -1.05
HOXA1-201ENST00000343060 NKX6-1P78426 367 aaPredicted RBP8.47□□□□□ -1.05
HOXA1-201ENST00000343060 HAGHQ16775 308 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 ZNF506Q5JVG8 444 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 ARMC6Q6NXE6 501 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 ZNF343Q6P1L6 599 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 UNQ6494/PRO21346Q6UXR6 183 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 DOK3Q7L591 496 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 SLC35E3Q7Z769 313 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 C9orf40Q8IXQ3 194 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 FGF14Q92915 247 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 OR8D2Q9GZM6 311 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 CHST11Q9NPF2 352 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 PNO1Q9NRX1 252 aaKnown RBP8.47□□□□□ -1.05
HOXA1-201ENST00000343060 MCTS1Q9ULC4 181 aaKnown RBP8.47□□□□□ -1.05
HOXA1-201ENST00000343060 A0A087X0M5 115 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 A0A1B0GX30 115 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 A0A1W2PNV4 684 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 IGLV3-1P01715 115 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 COL9A1P20849 921 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 PPM1FP49593 454 aaPredicted RBP8.47□□□□□ -1.05
HOXA1-201ENST00000343060 RAB4BP61018 213 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 UBE2KP61086 200 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 RND3P61587 244 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 CCL20P78556 96 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 DLK1P80370 383 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 GFI1BQ5VTD9 330 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 HSD17B11Q8NBQ5 300 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 OR14K1Q8NGZ2 314 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 GAL3ST4Q96RP7 486 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 MRPL13Q9BYD1 178 aaKnown RBP8.47□□□□□ -1.05
HOXA1-201ENST00000343060 MED29Q9NX70 200 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 ZNF319Q9P2F9 582 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 TP53TG5Q9Y2B4 290 aa8.47□□□□□ -1.05
HOXA1-201ENST00000343060 ARID1BQ8NFD5 2236 aaPredicted RBP8.47□□□□□ -1.05
HOXA1-201ENST00000343060 LAMA3Q16787 3333 aa8.46□□□□□ -1.05
HOXA1-201ENST00000343060 TGIF2-C20orf24A0A0A6YYL0 155 aa8.46□□□□□ -1.05
HOXA1-201ENST00000343060 A0A1W2PQF6 199 aa8.46□□□□□ -1.05
HOXA1-201ENST00000343060 H0YL77 283 aa8.46□□□□□ -1.05
HOXA1-201ENST00000343060 TERTO14746 1132 aaKnown RBP8.46□□□□□ -1.05
HOXA1-201ENST00000343060 XRCC2O43543 280 aa8.46□□□□□ -1.05
HOXA1-201ENST00000343060 PITX3O75364 302 aa8.46□□□□□ -1.05
HOXA1-201ENST00000343060 NDUFB7P17568 137 aa8.46□□□□□ -1.05
HOXA1-201ENST00000343060 ANOS1P23352 680 aa8.46□□□□□ -1.05
HOXA1-201ENST00000343060 DUSP1P28562 367 aa8.46□□□□□ -1.05
HOXA1-201ENST00000343060 NTSR1P30989 418 aa8.46□□□□□ -1.05
HOXA1-201ENST00000343060 RND2P52198 227 aa8.46□□□□□ -1.05
HOXA1-201ENST00000343060 PIGPP57054 158 aa8.46□□□□□ -1.05
HOXA1-201ENST00000343060 ZNF121P58317 390 aaPredicted RBP8.46□□□□□ -1.05
HOXA1-201ENST00000343060 POU3F1Q03052 451 aaPredicted RBP8.46□□□□□ -1.05
HOXA1-201ENST00000343060 PLCXD2Q0VAA5 305 aa8.46□□□□□ -1.05
HOXA1-201ENST00000343060 ICAM4Q14773 271 aa8.46□□□□□ -1.05
HOXA1-201ENST00000343060 LIAT1Q6ZQX7 453 aa8.46□□□□□ -1.05
HOXA1-201ENST00000343060 ZNF441Q8N8Z8 693 aa8.46□□□□□ -1.05
HOXA1-201ENST00000343060 CCDC54Q8NEL0 328 aa8.46□□□□□ -1.05
HOXA1-201ENST00000343060 OR10AD1Q8NGE0 317 aa8.46□□□□□ -1.05
HOXA1-201ENST00000343060 OR5L2Q8NGL0 311 aa8.46□□□□□ -1.05
HOXA1-201ENST00000343060 OR4D5Q8NGN0 318 aa8.46□□□□□ -1.05
HOXA1-201ENST00000343060 OR10G4Q8NGN3 311 aa8.46□□□□□ -1.05
HOXA1-201ENST00000343060 TVP23CQ96ET8 276 aa8.46□□□□□ -1.05
HOXA1-201ENST00000343060 BOD1Q96IK1 185 aa8.46□□□□□ -1.05
HOXA1-201ENST00000343060 GPER1Q99527 375 aa8.46□□□□□ -1.05
HOXA1-201ENST00000343060 SYT3Q9BQG1 590 aa8.46□□□□□ -1.05
HOXA1-201ENST00000343060 LIME1Q9H400 295 aa8.46□□□□□ -1.05
HOXA1-201ENST00000343060 PNRC2Q9NPJ4 139 aaKnown RBP8.46□□□□□ -1.05
HOXA1-201ENST00000343060 FAM86C1Q9NVL1 165 aa8.46□□□□□ -1.05
HOXA1-201ENST00000343060 ADAMTS9Q9P2N4 1935 aa8.46□□□□□ -1.06
HOXA1-201ENST00000343060 B4DEV8 164 aa8.46□□□□□ -1.06
HOXA1-201ENST00000343060 TMEM150CB9EJG8 249 aa8.46□□□□□ -1.06
HOXA1-201ENST00000343060 ST8SIA3O43173 380 aa8.46□□□□□ -1.06
HOXA1-201ENST00000343060 SCAF4O95104 1147 aaKnown RBP8.46□□□□□ -1.06
HOXA1-201ENST00000343060 DIRAS3O95661 229 aa8.46□□□□□ -1.06
HOXA1-201ENST00000343060 TNFP01375 233 aa8.46□□□□□ -1.06
HOXA1-201ENST00000343060 TRGC2P03986 189 aa8.46□□□□□ -1.06
HOXA1-201ENST00000343060 CELA2BP08218 269 aaPredicted RBP8.46□□□□□ -1.06
HOXA1-201ENST00000343060 OR5AC1P0C628 307 aa8.46□□□□□ -1.06
HOXA1-201ENST00000343060 EWSR1Q01844 656 aaKnown RBP eCLIP8.46□□□□□ -1.06
HOXA1-201ENST00000343060 NHLH2Q02577 135 aa8.46□□□□□ -1.06
HOXA1-201ENST00000343060 HHEXQ03014 270 aa8.46□□□□□ -1.06
HOXA1-201ENST00000343060 KISS1Q15726 138 aa8.46□□□□□ -1.06
HOXA1-201ENST00000343060 TMEM176BQ3YBM2 270 aaPredicted RBP8.46□□□□□ -1.06
HOXA1-201ENST00000343060 GALNTL5Q7Z4T8 443 aa8.46□□□□□ -1.06
HOXA1-201ENST00000343060 C1QL2Q7Z5L3 287 aa8.46□□□□□ -1.06
HOXA1-201ENST00000343060 METTL27Q8N6F8 245 aaPredicted RBP8.46□□□□□ -1.06
HOXA1-201ENST00000343060 ST8SIA1Q92185 356 aa8.46□□□□□ -1.06
HOXA1-201ENST00000343060 TSLPQ969D9 159 aa8.46□□□□□ -1.06
HOXA1-201ENST00000343060 MSI2Q96DH6 328 aaKnown RBP8.46□□□□□ -1.06
HOXA1-201ENST00000343060 GAS2L1Q99501 681 aaPredicted RBP8.46□□□□□ -1.06
HOXA1-201ENST00000343060 NEU1Q99519 415 aa8.46□□□□□ -1.06
HOXA1-201ENST00000343060 PLA2G2FQ9BZM2 168 aa8.46□□□□□ -1.06
HOXA1-201ENST00000343060 TCEAL2Q9H3H9 227 aaPredicted RBP8.46□□□□□ -1.06
HOXA1-201ENST00000343060 ZNF701Q9NV72 531 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms