RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 SLC45A2Q9UMX9 530 aa13.58□□□□□ -0.24
COL11A2-201ENST00000341947 SIGLEC7Q9Y286 467 aa13.58□□□□□ -0.24
COL11A2-201ENST00000341947 TMEM272A0A1B0GTI8 110 aa13.58□□□□□ -0.24
COL11A2-201ENST00000341947 ADAM20O43506 726 aa13.58□□□□□ -0.24
COL11A2-201ENST00000341947 ZNF260Q3ZCT1 412 aa13.58□□□□□ -0.24
COL11A2-201ENST00000341947 OR1L4Q8NGR5 311 aa13.58□□□□□ -0.24
COL11A2-201ENST00000341947 TSPAN32Q96QS1 320 aa13.58□□□□□ -0.24
COL11A2-201ENST00000341947 HIST1H1DP16402 221 aaKnown RBP13.58□□□□□ -0.24
COL11A2-201ENST00000341947 PTGFRP43088 359 aa13.58□□□□□ -0.24
COL11A2-201ENST00000341947 ZNF793Q6ZN11 406 aa13.58□□□□□ -0.24
COL11A2-201ENST00000341947 MYPOPQ86VE0 399 aaPredicted RBP13.58□□□□□ -0.24
COL11A2-201ENST00000341947 GLCCI1Q86VQ1 547 aa13.58□□□□□ -0.24
COL11A2-201ENST00000341947 WDR89Q96FK6 387 aaPredicted RBP13.58□□□□□ -0.24
COL11A2-201ENST00000341947 ARHGAP5-AS1Q96IT6 56 aa13.58□□□□□ -0.24
COL11A2-201ENST00000341947 MRGPRX3Q96LB0 322 aa13.58□□□□□ -0.24
COL11A2-201ENST00000341947 HSD17B10Q99714 261 aaKnown RBP13.58□□□□□ -0.24
COL11A2-201ENST00000341947 TMED3Q9Y3Q3 217 aa13.58□□□□□ -0.24
COL11A2-201ENST00000341947 K7ESF4 209 aa13.58□□□□□ -0.24
COL11A2-201ENST00000341947 RAE1P78406 368 aaKnown RBP13.58□□□□□ -0.24
COL11A2-201ENST00000341947 OR8B3Q8NGG8 313 aa13.58□□□□□ -0.24
COL11A2-201ENST00000341947 RFESDQ8TAC1 157 aa13.58□□□□□ -0.24
COL11A2-201ENST00000341947 C4orf45Q96LM5 186 aa13.58□□□□□ -0.24
COL11A2-201ENST00000341947 OR8B2Q96RD0 313 aa13.58□□□□□ -0.24
COL11A2-201ENST00000341947 OR2D2Q9H210 308 aa13.58□□□□□ -0.24
COL11A2-201ENST00000341947 NUMA1Q14980 2115 aa13.57□□□□□ -0.24
COL11A2-201ENST00000341947 SOX8P57073 446 aa13.57□□□□□ -0.24
COL11A2-201ENST00000341947 SLC38A11Q08AI6 406 aa13.57□□□□□ -0.24
COL11A2-201ENST00000341947 C20orf196Q8IYI0 205 aa13.57□□□□□ -0.24
COL11A2-201ENST00000341947 ZDHHC22Q8N966 263 aa13.57□□□□□ -0.24
COL11A2-201ENST00000341947 NPTNQ9Y639 398 aa13.57□□□□□ -0.24
COL11A2-201ENST00000341947 MYO18AQ92614 2054 aaKnown RBP13.57□□□□□ -0.24
COL11A2-201ENST00000341947 CTSVO60911 334 aa13.57□□□□□ -0.24
COL11A2-201ENST00000341947 PGA3P0DJD8 388 aa13.57□□□□□ -0.24
COL11A2-201ENST00000341947 FNDC7Q5VTL7 733 aa13.57□□□□□ -0.24
COL11A2-201ENST00000341947 PDE4DIPQ5VU43 2346 aa13.57□□□□□ -0.24
COL11A2-201ENST00000341947 TMEM92Q6UXU6 159 aa13.57□□□□□ -0.24
COL11A2-201ENST00000341947 KLHDC1Q8N7A1 406 aa13.57□□□□□ -0.24
COL11A2-201ENST00000341947 MED30Q96HR3 178 aa13.57□□□□□ -0.24
COL11A2-201ENST00000341947 ZNF230Q9UIE0 474 aaPredicted RBP13.57□□□□□ -0.24
COL11A2-201ENST00000341947 ANKRD12Q6UB98 2062 aa13.57□□□□□ -0.24
COL11A2-201ENST00000341947 IGHV3-43A0A0B4J1X8 118 aa13.57□□□□□ -0.24
COL11A2-201ENST00000341947 M0R296 226 aa13.57□□□□□ -0.24
COL11A2-201ENST00000341947 CISD3P0C7P0 127 aa13.57□□□□□ -0.24
COL11A2-201ENST00000341947 IGHV3-43DP0DP04 118 aa13.57□□□□□ -0.24
COL11A2-201ENST00000341947 GALNSP34059 522 aa13.57□□□□□ -0.24
COL11A2-201ENST00000341947 NTNG2Q96CW9 530 aa13.57□□□□□ -0.24
COL11A2-201ENST00000341947 RAB40CQ96S21 281 aa13.57□□□□□ -0.24
COL11A2-201ENST00000341947 RPP25Q9BUL9 199 aaKnown RBP13.57□□□□□ -0.24
COL11A2-201ENST00000341947 PKD1L3Q7Z443 1732 aa13.57□□□□□ -0.24
COL11A2-201ENST00000341947 C3orf80F5H4A9 247 aa13.57□□□□□ -0.24
COL11A2-201ENST00000341947 FAM27D1Q5T7N8 215 aa13.57□□□□□ -0.24
COL11A2-201ENST00000341947 UBTD1Q9HAC8 227 aa13.57□□□□□ -0.24
COL11A2-201ENST00000341947 LHX9Q9NQ69 397 aa13.57□□□□□ -0.24
COL11A2-201ENST00000341947 IL20Q9NYY1 176 aa13.57□□□□□ -0.24
COL11A2-201ENST00000341947 OR6C3Q9NZP0 311 aa13.57□□□□□ -0.24
COL11A2-201ENST00000341947 TBX19O60806 448 aa13.56□□□□□ -0.24
COL11A2-201ENST00000341947 SBK3P0C264 359 aa13.56□□□□□ -0.24
COL11A2-201ENST00000341947 SP6Q3SY56 376 aa13.56□□□□□ -0.24
COL11A2-201ENST00000341947 CYSLTR2Q9NS75 346 aa13.56□□□□□ -0.24
COL11A2-201ENST00000341947 KCNE1BA0A087WTH5 132 aa13.56□□□□□ -0.24
COL11A2-201ENST00000341947 TRAV38-1A0A0B4J264 116 aa13.56□□□□□ -0.24
COL11A2-201ENST00000341947 SCGB1C2P0DMR2 95 aa13.56□□□□□ -0.24
COL11A2-201ENST00000341947 C11orf87Q6NUJ2 197 aa13.56□□□□□ -0.24
COL11A2-201ENST00000341947 SMOC1Q9H4F8 434 aa13.56□□□□□ -0.24
COL11A2-201ENST00000341947 WBP1LQ9NX94 342 aa13.56□□□□□ -0.24
COL11A2-201ENST00000341947 C3orf85A0A1B0GTC6 90 aa13.56□□□□□ -0.24
COL11A2-201ENST00000341947 HSBP1O75506 76 aa13.56□□□□□ -0.24
COL11A2-201ENST00000341947 SP1P08047 785 aa13.56□□□□□ -0.24
COL11A2-201ENST00000341947 COL9A1P20849 921 aa13.56□□□□□ -0.24
COL11A2-201ENST00000341947 BLNKQ8WV28 456 aa13.56□□□□□ -0.24
COL11A2-201ENST00000341947 ZNF707Q96C28 371 aaPredicted RBP13.56□□□□□ -0.24
COL11A2-201ENST00000341947 PECRQ9BY49 303 aa13.56□□□□□ -0.24
COL11A2-201ENST00000341947 C12orf10Q9HB07 376 aa13.56□□□□□ -0.24
COL11A2-201ENST00000341947 PLSCR3Q9NRY6 295 aa13.56□□□□□ -0.24
COL11A2-201ENST00000341947 PYCARD-AS1I3L0S3 204 aa13.56□□□□□ -0.24
COL11A2-201ENST00000341947 RND1Q92730 232 aa13.56□□□□□ -0.24
COL11A2-201ENST00000341947 FAAP24Q9BTP7 215 aa13.56□□□□□ -0.24
COL11A2-201ENST00000341947 GPR87Q9BY21 358 aa13.56□□□□□ -0.24
COL11A2-201ENST00000341947 CCL2P13500 99 aa13.56□□□□□ -0.24
COL11A2-201ENST00000341947 BRS3P32247 399 aa13.56□□□□□ -0.24
COL11A2-201ENST00000341947 LGALS7P47929 136 aa13.56□□□□□ -0.24
COL11A2-201ENST00000341947 SLC16A12Q6ZSM3 486 aa13.56□□□□□ -0.24
COL11A2-201ENST00000341947 F2RL2O00254 374 aa13.55□□□□□ -0.24
COL11A2-201ENST00000341947 LANCL1O43813 399 aa13.55□□□□□ -0.24
COL11A2-201ENST00000341947 CALCRP30988 508 aa13.55□□□□□ -0.24
COL11A2-201ENST00000341947 SPNS3Q6ZMD2 512 aa13.55□□□□□ -0.24
COL11A2-201ENST00000341947 A0A1B0GTL3 188 aa13.55□□□□□ -0.24
COL11A2-201ENST00000341947 RNASEK-C17orf49H0YIS7 233 aa13.55□□□□□ -0.24
COL11A2-201ENST00000341947 ALX3O95076 343 aa13.55□□□□□ -0.24
COL11A2-201ENST00000341947 PWWP2BQ6NUJ5 590 aa13.55□□□□□ -0.24
COL11A2-201ENST00000341947 TIPARPQ7Z3E1 657 aaKnown RBP13.55□□□□□ -0.24
COL11A2-201ENST00000341947 PRR7Q8TB68 274 aa13.55□□□□□ -0.24
COL11A2-201ENST00000341947 TRAPPC1Q9Y5R8 145 aa13.55□□□□□ -0.24
COL11A2-201ENST00000341947 TUBAL3A6NHL2 446 aa13.55□□□□□ -0.24
COL11A2-201ENST00000341947 GLDNQ6ZMI3 551 aaPredicted RBP13.55□□□□□ -0.24
COL11A2-201ENST00000341947 ZNF429Q86V71 674 aa13.55□□□□□ -0.24
COL11A2-201ENST00000341947 MRGPRDQ8TDS7 321 aa13.55□□□□□ -0.24
COL11A2-201ENST00000341947 OR5B21A6NL26 309 aa13.55□□□□□ -0.24
COL11A2-201ENST00000341947 PLPP3O14495 311 aa13.55□□□□□ -0.24
COL11A2-201ENST00000341947 ZXDAP98168 799 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms