RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 MPZP25189 248 aa12.75□□□□□ -0.37
VAPA-201ENST00000340541 HAAOP46952 286 aa12.75□□□□□ -0.37
VAPA-201ENST00000340541 SLC34A1Q06495 639 aa12.75□□□□□ -0.37
VAPA-201ENST00000340541 ALKBH1Q13686 389 aaKnown RBP12.75□□□□□ -0.37
VAPA-201ENST00000340541 TUSC1Q2TAM9 212 aa12.75□□□□□ -0.37
VAPA-201ENST00000340541 TMEM244Q5VVB8 128 aa12.75□□□□□ -0.37
VAPA-201ENST00000340541 ZNF573Q86YE8 665 aa12.75□□□□□ -0.37
VAPA-201ENST00000340541 CALHM1Q8IU99 346 aa12.75□□□□□ -0.37
VAPA-201ENST00000340541 C3orf56Q8N813 242 aa12.75□□□□□ -0.37
VAPA-201ENST00000340541 SETD9Q8NE22 299 aa12.75□□□□□ -0.37
VAPA-201ENST00000340541 OR51A4Q8NGJ6 313 aa12.75□□□□□ -0.37
VAPA-201ENST00000340541 FBLIM1Q8WUP2 373 aa12.75□□□□□ -0.37
VAPA-201ENST00000340541 C10orf35Q96D05 121 aa12.75□□□□□ -0.37
VAPA-201ENST00000340541 ADAT3Q96EY9 351 aaPredicted RBP12.75□□□□□ -0.37
VAPA-201ENST00000340541 MRPL48Q96GC5 212 aaKnown RBP12.75□□□□□ -0.37
VAPA-201ENST00000340541 MRI1Q9BV20 369 aa12.75□□□□□ -0.37
VAPA-201ENST00000340541 PLEKHA1Q9HB21 404 aa12.75□□□□□ -0.37
VAPA-201ENST00000340541 ZNF222Q9UK12 451 aa12.75□□□□□ -0.37
VAPA-201ENST00000340541 HSPE1-MOB4S4R3N1 261 aa12.75□□□□□ -0.37
VAPA-201ENST00000340541 SPRY1O43609 319 aaPredicted RBP12.74□□□□□ -0.37
VAPA-201ENST00000340541 NOS1APO75052 506 aaPredicted RBP12.74□□□□□ -0.37
VAPA-201ENST00000340541 PGA5P0DJD9 388 aa12.74□□□□□ -0.37
VAPA-201ENST00000340541 SELLP14151 372 aa12.74□□□□□ -0.37
VAPA-201ENST00000340541 GLRA1P23415 457 aa12.74□□□□□ -0.37
VAPA-201ENST00000340541 FPR2P25090 351 aa12.74□□□□□ -0.37
VAPA-201ENST00000340541 ETV1P50549 477 aa12.74□□□□□ -0.37
VAPA-201ENST00000340541 CD276Q5ZPR3 534 aa12.74□□□□□ -0.37
VAPA-201ENST00000340541 BTNL3Q6UXE8 466 aa12.74□□□□□ -0.37
VAPA-201ENST00000340541 ZNF788Q6ZQV5 615 aa12.74□□□□□ -0.37
VAPA-201ENST00000340541 POC1AQ8NBT0 407 aa12.74□□□□□ -0.37
VAPA-201ENST00000340541 ZNF671Q8TAW3 534 aa12.74□□□□□ -0.37
VAPA-201ENST00000340541 UPRTQ96BW1 309 aa12.74□□□□□ -0.37
VAPA-201ENST00000340541 ZNF488Q96MN9 340 aa12.74□□□□□ -0.37
VAPA-201ENST00000340541 GAFA1Q96PS6 74 aa12.74□□□□□ -0.37
VAPA-201ENST00000340541 NRIP2Q9BQI9 281 aa12.74□□□□□ -0.37
VAPA-201ENST00000340541 DNTTIP1Q9H147 329 aa12.74□□□□□ -0.37
VAPA-201ENST00000340541 NLKQ9UBE8 527 aa12.74□□□□□ -0.37
VAPA-201ENST00000340541 DNAJB11Q9UBS4 358 aa12.74□□□□□ -0.37
VAPA-201ENST00000340541 IGKV1D-17A0A075B6S4 117 aa12.73□□□□□ -0.37
VAPA-201ENST00000340541 IGKV1-9A0A0C4DH69 117 aa12.73□□□□□ -0.37
VAPA-201ENST00000340541 OR2AT4A6NND4 320 aa12.73□□□□□ -0.37
VAPA-201ENST00000340541 ENSAO43768 121 aaKnown RBP12.73□□□□□ -0.37
VAPA-201ENST00000340541 GATBO75879 557 aaKnown RBP12.73□□□□□ -0.37
VAPA-201ENST00000340541 ZFPL1O95159 310 aa12.73□□□□□ -0.37
VAPA-201ENST00000340541 PSG2P11465 335 aa12.73□□□□□ -0.37
VAPA-201ENST00000340541 DCKP27707 260 aa12.73□□□□□ -0.37
VAPA-201ENST00000340541 DGUOKQ16854 277 aa12.73□□□□□ -0.37
VAPA-201ENST00000340541 C11orf91Q3C1V1 193 aa12.73□□□□□ -0.37
VAPA-201ENST00000340541 XAF1Q6GPH4 301 aa12.73□□□□□ -0.37
VAPA-201ENST00000340541 BTN2A1Q7KYR7 527 aa12.73□□□□□ -0.37
VAPA-201ENST00000340541 SLC36A1Q7Z2H8 476 aa12.73□□□□□ -0.37
VAPA-201ENST00000340541 ANGPTL5Q86XS5 388 aa12.73□□□□□ -0.37
VAPA-201ENST00000340541 TRMT10AQ8TBZ6 339 aaKnown RBP12.73□□□□□ -0.37
VAPA-201ENST00000340541 NPRL2Q8WTW4 380 aa12.73□□□□□ -0.37
VAPA-201ENST00000340541 PP6455Q8WZ26 134 aa12.73□□□□□ -0.37
VAPA-201ENST00000340541 TFAP2CQ92754 450 aa12.73□□□□□ -0.37
VAPA-201ENST00000340541 TMIGD2Q96BF3 282 aa12.73□□□□□ -0.37
VAPA-201ENST00000340541 MYCBPQ99417 103 aaPredicted RBP12.73□□□□□ -0.37
VAPA-201ENST00000340541 PKIBQ9C010 78 aa12.73□□□□□ -0.37
VAPA-201ENST00000340541 HHLA2Q9UM44 414 aa12.73□□□□□ -0.37
VAPA-201ENST00000340541 DIMT1Q9UNQ2 313 aaKnown RBP12.73□□□□□ -0.37
VAPA-201ENST00000340541 FAM230AA0A1W2PPH8 454 aa12.72□□□□□ -0.37
VAPA-201ENST00000340541 ACAA1P09110 424 aaPredicted RBP12.72□□□□□ -0.37
VAPA-201ENST00000340541 IGHV4-38-2P0DP08 117 aa12.72□□□□□ -0.37
VAPA-201ENST00000340541 MMP9P14780 707 aa12.72□□□□□ -0.37
VAPA-201ENST00000340541 FUT6P51993 359 aa12.72□□□□□ -0.37
VAPA-201ENST00000340541 GTF2A1P52655 376 aaPredicted RBP12.72□□□□□ -0.37
VAPA-201ENST00000340541 FGF12P61328 243 aa12.72□□□□□ -0.37
VAPA-201ENST00000340541 ERVK11-1P61568 191 aa12.72□□□□□ -0.37
VAPA-201ENST00000340541 IL24Q13007 206 aa12.72□□□□□ -0.37
VAPA-201ENST00000340541 MRPL28Q13084 256 aaKnown RBP12.72□□□□□ -0.37
VAPA-201ENST00000340541 ARMCX4Q5H9R4 360 aa12.72□□□□□ -0.37
VAPA-201ENST00000340541 OR2G6Q5TZ20 316 aa12.72□□□□□ -0.37
VAPA-201ENST00000340541 ACP7Q6ZNF0 438 aa12.72□□□□□ -0.37
VAPA-201ENST00000340541 UTS2BQ765I0 119 aa12.72□□□□□ -0.37
VAPA-201ENST00000340541 C8orf59Q8N0T1 100 aaPredicted RBP12.72□□□□□ -0.37
VAPA-201ENST00000340541 BPIFB2Q8N4F0 458 aa12.72□□□□□ -0.37
VAPA-201ENST00000340541 LY6G5BQ8NDX9 201 aa12.72□□□□□ -0.37
VAPA-201ENST00000340541 RPS4Y2Q8TD47 263 aa12.72□□□□□ -0.37
VAPA-201ENST00000340541 ST8SIA4Q92187 359 aa12.72□□□□□ -0.37
VAPA-201ENST00000340541 GGHQ92820 318 aa12.72□□□□□ -0.37
VAPA-201ENST00000340541 FGGYQ96C11 551 aa12.72□□□□□ -0.37
VAPA-201ENST00000340541 PDCD1LG2Q9BQ51 273 aa12.72□□□□□ -0.37
VAPA-201ENST00000340541 HES4Q9HCC6 221 aa12.72□□□□□ -0.37
VAPA-201ENST00000340541 RASL12Q9NYN1 266 aa12.72□□□□□ -0.37
VAPA-201ENST00000340541 ZNF69Q9UC07 566 aa12.72□□□□□ -0.37
VAPA-201ENST00000340541 CLEC2DQ9UHP7 191 aa12.72□□□□□ -0.37
VAPA-201ENST00000340541 RPUSD1Q9UJJ7 312 aaKnown RBP12.72□□□□□ -0.37
VAPA-201ENST00000340541 NUP50Q9UKX7 468 aa12.72□□□□□ -0.37
VAPA-201ENST00000340541 SLC7A11Q9UPY5 501 aa12.72□□□□□ -0.37
VAPA-201ENST00000340541 CAB39Q9Y376 341 aaPredicted RBP12.72□□□□□ -0.37
VAPA-201ENST00000340541 MAB21L2Q9Y586 359 aa12.72□□□□□ -0.37
VAPA-201ENST00000340541 IRGMA1A4Y4 181 aa12.71□□□□□ -0.37
VAPA-201ENST00000340541 TMEM212A6NML5 194 aa12.71□□□□□ -0.37
VAPA-201ENST00000340541 ZNF879B4DU55 563 aa12.71□□□□□ -0.37
VAPA-201ENST00000340541 SIGLEC5O15389 551 aa12.71□□□□□ -0.37
VAPA-201ENST00000340541 NDUFB3O43676 98 aa12.71□□□□□ -0.37
VAPA-201ENST00000340541 ECDO95905 644 aaPredicted RBP12.71□□□□□ -0.37
VAPA-201ENST00000340541 LALBAP00709 142 aa12.71□□□□□ -0.37
VAPA-201ENST00000340541 PLATP00750 562 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms