RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 SLC25A26Q70HW3 274 aa19.29■□□□□ 0.68
PDLIM2-203ENST00000339162 ZNF611Q8N823 705 aa19.29■□□□□ 0.68
PDLIM2-203ENST00000339162 OR52B4Q8NGK2 314 aa19.29■□□□□ 0.68
PDLIM2-203ENST00000339162 CHST6Q9GZX3 395 aa19.29■□□□□ 0.68
PDLIM2-203ENST00000339162 NPDC1Q9NQX5 325 aaPredicted RBP19.29■□□□□ 0.68
PDLIM2-203ENST00000339162 ING3Q9NXR8 418 aa19.29■□□□□ 0.68
PDLIM2-203ENST00000339162 ZNF230Q9UIE0 474 aaPredicted RBP19.29■□□□□ 0.68
PDLIM2-203ENST00000339162 ZNF222Q9UK12 451 aa19.29■□□□□ 0.68
PDLIM2-203ENST00000339162 VSIG10L2P0DP72 767 aa19.28■□□□□ 0.68
PDLIM2-203ENST00000339162 PDCD1Q15116 288 aa19.28■□□□□ 0.68
PDLIM2-203ENST00000339162 RNASE10Q5GAN6 216 aaKnown RBP19.28■□□□□ 0.68
PDLIM2-203ENST00000339162 ZDHHC23Q8IYP9 409 aa19.28■□□□□ 0.68
PDLIM2-203ENST00000339162 WDR31Q8NA23 367 aa19.28■□□□□ 0.68
PDLIM2-203ENST00000339162 MAFIPQ8WZ33 124 aa19.28■□□□□ 0.68
PDLIM2-203ENST00000339162 CDH20Q9HBT6 801 aa19.28■□□□□ 0.68
PDLIM2-203ENST00000339162 RRP8O43159 456 aaKnown RBP19.28■□□□□ 0.68
PDLIM2-203ENST00000339162 WDR1O75083 606 aa19.28■□□□□ 0.68
PDLIM2-203ENST00000339162 PMP2P02689 132 aa19.28■□□□□ 0.68
PDLIM2-203ENST00000339162 HOXC12P31275 282 aa19.28■□□□□ 0.68
PDLIM2-203ENST00000339162 NPBWR2P48146 333 aa19.28■□□□□ 0.68
PDLIM2-203ENST00000339162 SIGIRRQ6IA17 410 aa19.28■□□□□ 0.68
PDLIM2-203ENST00000339162 GLDNQ6ZMI3 551 aaPredicted RBP19.28■□□□□ 0.68
PDLIM2-203ENST00000339162 Q8NA96 180 aa19.28■□□□□ 0.68
PDLIM2-203ENST00000339162 FBXW5Q969U6 566 aa19.28■□□□□ 0.68
PDLIM2-203ENST00000339162 TECTBQ96PL2 329 aa19.28■□□□□ 0.68
PDLIM2-203ENST00000339162 A0A1B0GUH1 482 aa19.27■□□□□ 0.68
PDLIM2-203ENST00000339162 HAAOP46952 286 aa19.27■□□□□ 0.68
PDLIM2-203ENST00000339162 BRICD5Q6PL45 260 aa19.27■□□□□ 0.68
PDLIM2-203ENST00000339162 ASCL4Q6XD76 172 aa19.27■□□□□ 0.68
PDLIM2-203ENST00000339162 FBXL14Q8N1E6 418 aa19.27■□□□□ 0.68
PDLIM2-203ENST00000339162 CSNK2A3Q8NEV1 391 aa19.27■□□□□ 0.68
PDLIM2-203ENST00000339162 OR5L1Q8NGL2 311 aa19.27■□□□□ 0.68
PDLIM2-203ENST00000339162 ST6GALNAC5Q9BVH7 336 aa19.27■□□□□ 0.68
PDLIM2-203ENST00000339162 OR2J1Q9GZK6 312 aa19.27■□□□□ 0.68
PDLIM2-203ENST00000339162 PLEKHJ1Q9NW61 149 aa19.27■□□□□ 0.68
PDLIM2-203ENST00000339162 EIF3KQ9UBQ5 218 aaKnown RBP19.27■□□□□ 0.68
PDLIM2-203ENST00000339162 ZNF69Q9UC07 566 aa19.27■□□□□ 0.68
PDLIM2-203ENST00000339162 ZNF107Q9UII5 783 aaPredicted RBP19.27■□□□□ 0.68
PDLIM2-203ENST00000339162 PQLC2LA1A4F0 135 aa19.27■□□□□ 0.67
PDLIM2-203ENST00000339162 FIGNL2A6NMB9 653 aa19.27■□□□□ 0.67
PDLIM2-203ENST00000339162 GEMIN2O14893 280 aaKnown RBP19.27■□□□□ 0.67
PDLIM2-203ENST00000339162 SMPD2O60906 423 aa19.27■□□□□ 0.67
PDLIM2-203ENST00000339162 CST4P01036 141 aa19.27■□□□□ 0.67
PDLIM2-203ENST00000339162 CXADRP78310 365 aa19.27■□□□□ 0.67
PDLIM2-203ENST00000339162 CEACAM21Q3KPI0 293 aa19.27■□□□□ 0.67
PDLIM2-203ENST00000339162 C1orf185Q5T7R7 199 aa19.27■□□□□ 0.67
PDLIM2-203ENST00000339162 CD276Q5ZPR3 534 aa19.27■□□□□ 0.67
PDLIM2-203ENST00000339162 CCDC36Q8IYA8 594 aa19.27■□□□□ 0.67
PDLIM2-203ENST00000339162 TCTE3Q8IZS6 198 aa19.27■□□□□ 0.67
PDLIM2-203ENST00000339162 CAPSLQ8WWF8 208 aa19.27■□□□□ 0.67
PDLIM2-203ENST00000339162 ZNF732B4DXR9 585 aa19.26■□□□□ 0.67
PDLIM2-203ENST00000339162 PRAF2O60831 178 aa19.26■□□□□ 0.67
PDLIM2-203ENST00000339162 FAM87AP0C7U9 286 aa19.26■□□□□ 0.67
PDLIM2-203ENST00000339162 PNLIPRP3Q17RR3 467 aa19.26■□□□□ 0.67
PDLIM2-203ENST00000339162 METTL11BQ5VVY1 283 aa19.26■□□□□ 0.67
PDLIM2-203ENST00000339162 PIAS4Q8N2W9 510 aaPredicted RBP19.26■□□□□ 0.67
PDLIM2-203ENST00000339162 FTMTQ8N4E7 242 aa19.26■□□□□ 0.67
PDLIM2-203ENST00000339162 OR4K15Q8NH41 348 aa19.26■□□□□ 0.67
PDLIM2-203ENST00000339162 ST8SIA4Q92187 359 aa19.26■□□□□ 0.67
PDLIM2-203ENST00000339162 HDHD3Q9BSH5 251 aaPredicted RBP19.26■□□□□ 0.67
PDLIM2-203ENST00000339162 RAXQ9Y2V3 346 aa19.26■□□□□ 0.67
PDLIM2-203ENST00000339162 IL2RAP01589 272 aa19.25■□□□□ 0.67
PDLIM2-203ENST00000339162 MAB21L1Q13394 359 aa19.25■□□□□ 0.67
PDLIM2-203ENST00000339162 KRTCAP3Q53RY4 240 aa19.25■□□□□ 0.67
PDLIM2-203ENST00000339162 OSR2Q8N2R0 312 aa19.25■□□□□ 0.67
PDLIM2-203ENST00000339162 OR13C8Q8NGS7 320 aa19.25■□□□□ 0.67
PDLIM2-203ENST00000339162 CA6P23280 308 aa19.25■□□□□ 0.67
PDLIM2-203ENST00000339162 PPP1CBP62140 327 aa19.25■□□□□ 0.67
PDLIM2-203ENST00000339162 MRPL49Q13405 166 aaKnown RBP19.25■□□□□ 0.67
PDLIM2-203ENST00000339162 MICBQ29980 383 aa19.25■□□□□ 0.67
PDLIM2-203ENST00000339162 ALKBH2Q6NS38 261 aa19.25■□□□□ 0.67
PDLIM2-203ENST00000339162 TMED4Q7Z7H5 227 aa19.25■□□□□ 0.67
PDLIM2-203ENST00000339162 NOXA1Q86UR1 476 aa19.25■□□□□ 0.67
PDLIM2-203ENST00000339162 PXT1Q8NFP0 134 aa19.25■□□□□ 0.67
PDLIM2-203ENST00000339162 SLAMF9Q96A28 289 aa19.25■□□□□ 0.67
PDLIM2-203ENST00000339162 FAAP24Q9BTP7 215 aa19.25■□□□□ 0.67
PDLIM2-203ENST00000339162 SCP2D1Q9UJQ7 156 aa19.25■□□□□ 0.67
PDLIM2-203ENST00000339162 ST3GAL6Q9Y274 331 aa19.25■□□□□ 0.67
PDLIM2-203ENST00000339162 BOLA1Q9Y3E2 137 aa19.25■□□□□ 0.67
PDLIM2-203ENST00000339162 ANKRD30BLA7E2S9 258 aa19.24■□□□□ 0.67
PDLIM2-203ENST00000339162 ZNF780AO75290 641 aaPredicted RBP19.24■□□□□ 0.67
PDLIM2-203ENST00000339162 SNU13P55769 128 aaKnown RBP19.24■□□□□ 0.67
PDLIM2-203ENST00000339162 MEF2DQ14814 521 aa19.24■□□□□ 0.67
PDLIM2-203ENST00000339162 SF3B4Q15427 424 aaKnown RBP eCLIP19.24■□□□□ 0.67
PDLIM2-203ENST00000339162 ZNF324BQ6AW86 544 aaPredicted RBP19.24■□□□□ 0.67
PDLIM2-203ENST00000339162 C17orf107Q6ZR85 190 aa19.24■□□□□ 0.67
PDLIM2-203ENST00000339162 SLC36A1Q7Z2H8 476 aa19.24■□□□□ 0.67
PDLIM2-203ENST00000339162 ZNF486Q96H40 463 aaPredicted RBP19.24■□□□□ 0.67
PDLIM2-203ENST00000339162 OPA3Q9H6K4 179 aa19.24■□□□□ 0.67
PDLIM2-203ENST00000339162 DISC1C4P0D8 188 aa19.24■□□□□ 0.67
PDLIM2-203ENST00000339162 F8VVB4 439 aa19.24■□□□□ 0.67
PDLIM2-203ENST00000339162 F8VWA3 439 aa19.24■□□□□ 0.67
PDLIM2-203ENST00000339162 CBR1P16152 277 aa19.24■□□□□ 0.67
PDLIM2-203ENST00000339162 MECP2P51608 486 aaKnown RBP19.24■□□□□ 0.67
PDLIM2-203ENST00000339162 UBE2MP61081 183 aaKnown RBP19.24■□□□□ 0.67
PDLIM2-203ENST00000339162 MRPS15P82914 257 aaKnown RBP19.24■□□□□ 0.67
PDLIM2-203ENST00000339162 FAM57AQ8TBR7 257 aa19.24■□□□□ 0.67
PDLIM2-203ENST00000339162 DYRK2Q92630 601 aa19.24■□□□□ 0.67
PDLIM2-203ENST00000339162 MRGPRFQ96AM1 343 aa19.24■□□□□ 0.67
PDLIM2-203ENST00000339162 HIST1H2AAQ96QV6 131 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms