RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 PGLYRP3Q96LB9 341 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 GPR82Q96P67 336 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 HINT2Q9BX68 163 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 RAB1BQ9H0U4 201 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 LPAR5Q9H1C0 372 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 ZNF319Q9P2F9 582 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 PAM16Q9Y3D7 125 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 NRXN3Q9Y4C0 1643 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 LRP5LA4QPB2 252 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 PGPEP1LA6NFU8 196 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 ETV2O00321 342 aaPredicted RBP3.68□□□□□ -1.82
NEDD4-201ENST00000338963 KCNQ2O43526 872 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 TMPRSS11DO60235 418 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 S1PR2O95136 353 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 PSG1P11464 419 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 MMP9P14780 707 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 FUT3P21217 361 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 UCP1P25874 307 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 OTX2P32243 289 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 ZXDBP98169 803 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 Q0VG73 95 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 MMDQ15546 238 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 RNFT1Q5M7Z0 435 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 CLECL1Q8IZS7 167 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 DEFB125Q8N687 156 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 FAM3DQ96BQ1 224 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 INSM2Q96T92 566 aaPredicted RBP3.68□□□□□ -1.82
NEDD4-201ENST00000338963 JKAMPQ9P055 326 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 MARCH4Q9P2E8 410 aaPredicted RBP3.68□□□□□ -1.82
NEDD4-201ENST00000338963 JPT1Q9UK76 154 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 KIF13AQ9H1H9 1805 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 TMEM212A6NML5 194 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 J3KTA2 159 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 K7N7A8 449 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 SLC17A2O00624 439 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 PMCHP20382 165 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 YPEL5P62699 121 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 RUNX1Q01196 453 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 RAB32Q13637 225 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 FBXL22Q6P050 247 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 AGTRAPQ6RW13 159 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 UNQ5815/PRO19632Q6UWF5 114 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 SBSNQ6UWP8 590 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 TMEM184AQ6ZMB5 413 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 LCNL1Q6ZST4 164 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 OR2L13Q8N349 312 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 SIRT6Q8N6T7 355 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 RERGQ96A58 199 aaPredicted RBP3.68□□□□□ -1.82
NEDD4-201ENST00000338963 SMIM7Q9BQ49 75 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 ST6GALNAC2Q9UJ37 374 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 HSPB8Q9UJY1 196 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 MYO5BQ9ULV0 1848 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 SLC2A10O95528 541 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 HLA-DRB1P01911 266 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 FABP2P12104 132 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 HOXB2P14652 356 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 CRISP2P16562 243 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 OR1D4P47884 311 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 PLAURQ03405 335 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 MS4A13Q5J8X5 152 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 TMEM164Q5U3C3 297 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 LIAT1Q6ZQX7 453 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 GATSQ8NAP1 163 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 RPS4Y2Q8TD47 263 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 KXD1Q9BQD3 176 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 SPATA25Q9BR10 227 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 TPSD1Q9BZJ3 242 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 ULBP2Q9BZM5 246 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 NGBQ9NPG2 151 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 TMEM30AQ9NV96 361 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 HHLA2Q9UM44 414 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 FCF1Q9Y324 198 aaKnown RBP3.68□□□□□ -1.82
NEDD4-201ENST00000338963 OR2W5A6NFC9 320 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 RAMP1O60894 148 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 SMIM10L1P0DMW3 83 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 HIST1H1AQ02539 215 aaPredicted RBP3.68□□□□□ -1.82
NEDD4-201ENST00000338963 PRICKLE4Q2TBC4 344 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 CEACAM21Q3KPI0 293 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 C9orf50Q5SZB4 431 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 FIGLAQ6QHK4 219 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 BCDIN3DQ7Z5W3 292 aaKnown RBP3.68□□□□□ -1.82
NEDD4-201ENST00000338963 TOP6BLQ8N6T0 577 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 SMIM10Q96HG1 83 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 HSPB9Q9BQS6 159 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 RSG1Q9BU20 258 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 RNF126Q9BV68 326 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 ZNF391Q9UJN7 358 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 SETD1BQ9UPS6 1966 aaKnown RBP3.68□□□□□ -1.82
NEDD4-201ENST00000338963 C9JQL5 133 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 M0R2Z0 102 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 CATP04040 527 aaKnown RBP3.68□□□□□ -1.82
NEDD4-201ENST00000338963 PFN1P07737 140 aaKnown RBP3.68□□□□□ -1.82
NEDD4-201ENST00000338963 HNRNPA1P09651 372 aaKnown RBP eCLIP3.68□□□□□ -1.82
NEDD4-201ENST00000338963 DUSP1P28562 367 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 SLC6A12P48065 614 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 CDC42EP1Q00587 391 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 PMP22Q01453 160 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 GGTLC2Q14390 218 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 TMEM97Q5BJF2 176 aa3.68□□□□□ -1.82
NEDD4-201ENST00000338963 SUSD4Q5VX71 490 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms