RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 TRAF4Q9BUZ4 470 aaPredicted RBP7.68□□□□□ -1.18
SNCA-201ENST00000336904 METTL8Q9H825 291 aaKnown RBP7.68□□□□□ -1.18
SNCA-201ENST00000336904 OR2S2Q9NQN1 319 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 SHPKQ9UHJ6 478 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 PRSS50Q9UI38 385 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 AK3Q9UIJ7 227 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 RNF222A6NCQ9 220 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 TMEM127O75204 238 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 SCGB1D2O95969 90 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 NRASP01111 189 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 GSK3AP49840 483 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 SUPT4H1P63272 117 aaKnown RBP7.68□□□□□ -1.18
SNCA-201ENST00000336904 CLLU1Q5K131 121 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 RNFT1Q5M7Z0 435 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 AADACL3Q5VUY0 350 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 NUFIP2Q7Z417 695 aaKnown RBP7.68□□□□□ -1.18
SNCA-201ENST00000336904 MYPOPQ86VE0 399 aaPredicted RBP7.68□□□□□ -1.18
SNCA-201ENST00000336904 ZBTB44Q8NCP5 570 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 DCUN1D4Q92564 292 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 HAS2Q92819 552 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 RRNAD1Q96FB5 475 aaKnown RBP7.68□□□□□ -1.18
SNCA-201ENST00000336904 SLCO5A1Q9H2Y9 848 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 ZNF703Q9H7S9 590 aaPredicted RBP7.68□□□□□ -1.18
SNCA-201ENST00000336904 PARPBPQ9NWS1 579 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 SDHAF2Q9NX18 166 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 OR5AC2Q9NZP5 309 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 V9GYS6 101 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 KALRNO60229 2985 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 GTF3C1Q12789 2109 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 MED12LQ86YW9 2145 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 ZNF292O60281 2723 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 LOC102725191A0A1B0GVB3 256 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 LINC00862A6NCI5 91 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 RFPL4AA6NLU0 287 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 GJE1A6NN92 205 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 RFPL4AL1F8VTS6 287 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 NXPH3O95157 252 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 MELTFP08582 738 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 ARPC4P59998 168 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 RAB35Q15286 201 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 SLC25A26Q70HW3 274 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 HOGA1Q86XE5 327 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 SSC4DQ8WTU2 575 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 RTBDNQ9BSG5 229 aaPredicted RBP7.68□□□□□ -1.18
SNCA-201ENST00000336904 PARP12Q9H0J9 701 aaKnown RBP7.68□□□□□ -1.18
SNCA-201ENST00000336904 CHMP1AQ9HD42 196 aaPredicted RBP7.68□□□□□ -1.18
SNCA-201ENST00000336904 PTTG3PQ9NZH4 202 aa7.68□□□□□ -1.18
SNCA-201ENST00000336904 A0A0A6YYH2 397 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 TRAV39A0A0B4J263 110 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 A6NJ64 397 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 F5H0A9 414 aaPredicted RBP7.67□□□□□ -1.18
SNCA-201ENST00000336904 H0YIZ8 118 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 OR7C1O76099 320 aaPredicted RBP7.67□□□□□ -1.18
SNCA-201ENST00000336904 GP1BAP07359 652 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 RRASP10301 218 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 ICAM2P13598 275 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 CNR1P21554 472 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 IL32P24001 234 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 OTX1P32242 354 aaPredicted RBP7.67□□□□□ -1.18
SNCA-201ENST00000336904 THBS4P35443 961 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 LHX2P50458 406 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 GPM6AP51674 278 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 FAM3AP98173 230 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 TMEM164Q5U3C3 297 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 C11orf87Q6NUJ2 197 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 TMEM65Q6PI78 240 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 SLC38A6Q8IZM9 456 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 OR56B2PQ8NGI1 322 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 OR11L1Q8NGX0 322 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 SLAMF9Q96A28 289 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 PTX4Q96A99 478 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 SLX1AQ9BQ83 275 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 SMIM3Q9BZL3 60 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 PPA2Q9H2U2 334 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 MTRF1O75570 445 aaKnown RBP7.67□□□□□ -1.18
SNCA-201ENST00000336904 CHRM2P08172 466 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 PRF1P14222 555 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 MPGP29372 298 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 MEOX1P50221 254 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 CLDN18P56856 261 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 RIPPLY1Q0D2K3 151 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 CDH26Q8IXH8 852 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 MITD1Q8WV92 249 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 ST8SIA2Q92186 375 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 RBPMSQ93062 196 aaKnown RBP7.67□□□□□ -1.18
SNCA-201ENST00000336904 NARS2Q96I59 477 aaKnown RBP7.67□□□□□ -1.18
SNCA-201ENST00000336904 IER2Q9BTL4 223 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 LDAHQ9H6V9 325 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 BOKQ9UMX3 212 aaPredicted RBP7.67□□□□□ -1.18
SNCA-201ENST00000336904 ST3GAL6Q9Y274 331 aa7.67□□□□□ -1.18
SNCA-201ENST00000336904 ROS1P08922 2347 aa7.66□□□□□ -1.18
SNCA-201ENST00000336904 CEP295Q9C0D2 2601 aa7.66□□□□□ -1.18
SNCA-201ENST00000336904 A0A0U1RQV5 110 aa7.66□□□□□ -1.18
SNCA-201ENST00000336904 NKX2-8O15522 239 aa7.66□□□□□ -1.18
SNCA-201ENST00000336904 IGLV3-1P01715 115 aa7.66□□□□□ -1.18
SNCA-201ENST00000336904 PTGER4P35408 488 aa7.66□□□□□ -1.18
SNCA-201ENST00000336904 HIST1H3AP68431 136 aa7.66□□□□□ -1.18
SNCA-201ENST00000336904 SSBP1Q04837 148 aaKnown RBP7.66□□□□□ -1.18
SNCA-201ENST00000336904 HIST2H3PS2Q5TEC6 136 aa7.66□□□□□ -1.18
SNCA-201ENST00000336904 Q6ZPA2 131 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms