RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 ARPC2O15144 300 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 CCDC22O60826 627 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 SCN2BO60939 215 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 STK16O75716 305 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 SULT1C4O75897 302 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 AHSGP02765 367 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 SBK3P0C264 359 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 RRASP10301 218 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 SLC2A1P11166 492 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 EIF1AXP47813 144 aaKnown RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 KRT6CP48668 564 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 HMGA2P52926 109 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 UGT2B15P54855 530 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 STX17P56962 302 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 PCBP3P57721 371 aaKnown RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 RAE1P78406 368 aaKnown RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 POU6F2P78424 691 aaPredicted RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 SSBP2P81877 361 aaPredicted RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 SNTB2Q13425 540 aaKnown RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 GPR176Q14439 515 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 ICAM4Q14773 271 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 TGFBIQ15582 683 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 SNAPC1Q16533 368 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 HHATQ5VTY9 493 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 AADACL4Q5VUY2 407 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 RPL13AP3Q6NVV1 102 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 DRAM2Q6UX65 266 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 IDO2Q6ZQW0 420 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 H1FNTQ75WM6 255 aaPredicted RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 EIF3MQ7L2H7 374 aaKnown RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 LINGO2Q7L985 606 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 PRUNE1Q86TP1 453 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 SERPINA11Q86U17 422 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 MDP1Q86V88 176 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 C11orf53Q8IXP5 236 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 C1orf52Q8N6N3 182 aaKnown RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 LINC00469Q8N7U9 141 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 SLC30A7Q8NEW0 376 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 OR5AU1Q8NGC0 362 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 MGARPQ8TDB4 240 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 VN1R17PQ8TDU5 208 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 ABHD5Q8WTS1 349 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 NEIL2Q969S2 332 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 ROPN1LQ96C74 230 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 CNRIP1Q96F85 164 aaPredicted RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF778Q96MU6 729 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 AIFM2Q9BRQ8 373 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 ADI1Q9BV57 179 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 QRSL1Q9H0R6 528 aaKnown RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 GABARAPL1Q9H0R8 117 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 C1orf21Q9H246 121 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 ANKRA2Q9H9E1 313 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 PLSCR3Q9NRY6 295 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 DECR2Q9NUI1 292 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 NDE1Q9NXR1 346 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 MGAT4AQ9UM21 535 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 BAIAP2Q9UQB8 552 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 RUVBL2Q9Y230 463 aaKnown RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 ST3GAL6Q9Y274 331 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 R3HDM2Q9Y2K5 976 aaKnown RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 SH3GLB1Q9Y371 365 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 A0A087WWV3 80 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 TCRBV9S1A1TA0A576 114 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 CTAGE15A4D2H0 777 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 TMEM247A6NEH6 219 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 PRORSD1PA6NEY8 169 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF705FA8MVS1 300 aaPredicted RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 M0R1B8 84 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 DLGAP1O14490 977 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 RIPK2O43353 540 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 CREBL2O60519 120 aaPredicted RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 PLIN3O60664 434 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 RAMP1O60894 148 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 ATP5HO75947 161 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 HAUS5O94927 633 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 AHSA1O95433 338 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 FAM107AO95990 144 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 FGGP02679 453 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 S100BP04271 92 aaPredicted RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 IL6P05231 212 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 CRYGCP07315 174 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 GSTP1P09211 210 aaKnown RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF705DP0CH99 300 aaPredicted RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 ZNF705BP0CI00 300 aaPredicted RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 SMIM18P0DKX4 95 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 VSIG10L2P0DP72 767 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 GPX2P18283 190 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 GZMMP51124 257 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 P2RX3P56373 397 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 CLDN20P56880 219 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 LINC00205P59089 165 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 HPCAP84074 193 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 TNFAIP6P98066 277 aaPredicted RBP1.1□□□□□ -2.23
LINC00643-201ENST00000334389 FOXF1Q12946 379 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 CALCOCO2Q13137 446 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 GPR50Q13585 617 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 AARDQ4LEZ3 155 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 LRRC10Q5BKY1 277 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 ACSBG2Q5FVE4 666 aa1.1□□□□□ -2.23
LINC00643-201ENST00000334389 FAM69AQ5T7M9 428 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms