RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 RFPL4BQ6ZWI9 263 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 OVCH2Q7RTZ1 564 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 PEG10Q86TG7 708 aaKnown RBP12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 TMEM17Q86X19 198 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 KCNRGQ8N5I3 272 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 CPEB3Q8NE35 698 aaKnown RBP12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 TMEM185AQ8NFB2 350 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 LRRC20Q8TCA0 184 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 ST8SIA2Q92186 375 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 BORCS8Q96FH0 119 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 TTTY12Q9BZ98 90 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 NARFLQ9H6Q4 476 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 SLC7A10Q9NS82 523 aa12.91□□□□□ -0.34
CLCNKA-201ENST00000331433 A0A096LPE4 126 aa12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 hCG_38984A0A1B0GV85 526 aa12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 A0A1W2PPZ6 126 aa12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 PCNX2A6NKB5 2137 aa12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 C21orf140B9A014 251 aa12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 ZNF587BE7ETH6 402 aa12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 ADAP1O75689 374 aa12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 EDN3P14138 238 aa12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 RBP2P50120 134 aa12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 TUSC5Q8IXB3 177 aa12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 CCDC120Q96HB5 630 aa12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 CDC6Q99741 560 aa12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 FAAP24Q9BTP7 215 aa12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 CALHM2Q9HA72 323 aa12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 B4GALT7Q9UBV7 327 aa12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 FRYQ5TBA9 3013 aa12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 FARS2O95363 451 aaKnown RBP12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 SFT2D2O95562 160 aa12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 PRKACBP22694 351 aa12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 LUMP51884 338 aaPredicted RBP12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 FOXG1P55316 489 aaPredicted RBP12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 ZNF345Q14585 488 aa12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 FAM74A1Q5RGS3 127 aa12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 RPUSD3Q6P087 351 aaKnown RBP12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 OR5M9Q8NGP3 310 aa12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 THAP6Q8TBB0 222 aa12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 FNDC9Q8TBE3 224 aa12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 ADAMTS17Q8TE56 1095 aa12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 EMG1Q92979 244 aaKnown RBP12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 TMEM45BQ96B21 275 aa12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 ZNF75AQ96N20 296 aa12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 PRRC2CQ9Y520 2896 aaKnown RBP12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 ASPMQ8IZT6 3477 aa12.9□□□□□ -0.34
CLCNKA-201ENST00000331433 IGKV1-12A0A0C4DH73 117 aa12.89□□□□□ -0.35
CLCNKA-201ENST00000331433 KANTRA0A1W2PQU2 76 aa12.89□□□□□ -0.35
CLCNKA-201ENST00000331433 MFSD2BA6NFX1 497 aa12.89□□□□□ -0.35
CLCNKA-201ENST00000331433 MPTX1A8MV57 137 aa12.89□□□□□ -0.35
CLCNKA-201ENST00000331433 OR2F2O95006 317 aa12.89□□□□□ -0.35
CLCNKA-201ENST00000331433 IGKV1D-12P01611 117 aa12.89□□□□□ -0.35
CLCNKA-201ENST00000331433 CRHP06850 196 aa12.89□□□□□ -0.35
CLCNKA-201ENST00000331433 ARF1P84077 181 aaKnown RBP12.89□□□□□ -0.35
CLCNKA-201ENST00000331433 OR2F1Q13607 317 aa12.89□□□□□ -0.35
CLCNKA-201ENST00000331433 ANKRD55Q3KP44 614 aa12.89□□□□□ -0.35
CLCNKA-201ENST00000331433 PIGYQ3MUY2 71 aa12.89□□□□□ -0.35
CLCNKA-201ENST00000331433 TMEM42Q69YG0 159 aa12.89□□□□□ -0.35
CLCNKA-201ENST00000331433 BRICD5Q6PL45 260 aa12.89□□□□□ -0.35
CLCNKA-201ENST00000331433 DYRK2Q92630 601 aa12.89□□□□□ -0.35
CLCNKA-201ENST00000331433 CHMP1AQ9HD42 196 aaPredicted RBP12.89□□□□□ -0.35
CLCNKA-201ENST00000331433 LOC400499M0QZD8 3231 aa12.89□□□□□ -0.35
CLCNKA-201ENST00000331433 IGKV3D-15A0A087WSY6 115 aa12.89□□□□□ -0.35
CLCNKA-201ENST00000331433 BCL2L11O43521 198 aa12.89□□□□□ -0.35
CLCNKA-201ENST00000331433 RRADP55042 308 aa12.89□□□□□ -0.35
CLCNKA-201ENST00000331433 UBA52P62987 128 aaKnown RBP12.89□□□□□ -0.35
CLCNKA-201ENST00000331433 C3AR1Q16581 482 aa12.89□□□□□ -0.35
CLCNKA-201ENST00000331433 FAM209AQ5JX71 171 aa12.89□□□□□ -0.35
CLCNKA-201ENST00000331433 ACOT7LQ6ZUV0 252 aa12.89□□□□□ -0.35
CLCNKA-201ENST00000331433 FAM219AQ8IW50 185 aa12.89□□□□□ -0.35
CLCNKA-201ENST00000331433 ZSCAN4Q8NAM6 433 aaPredicted RBP12.89□□□□□ -0.35
CLCNKA-201ENST00000331433 OR1S1Q8NH92 325 aa12.89□□□□□ -0.35
CLCNKA-201ENST00000331433 PIGCQ92535 297 aa12.89□□□□□ -0.35
CLCNKA-201ENST00000331433 KCNMB2Q9Y691 235 aa12.89□□□□□ -0.35
CLCNKA-201ENST00000331433 CACNA1HO95180 2353 aa12.89□□□□□ -0.35
CLCNKA-201ENST00000331433 KNG1P01042 644 aa12.88□□□□□ -0.35
CLCNKA-201ENST00000331433 CCL2P13500 99 aa12.88□□□□□ -0.35
CLCNKA-201ENST00000331433 CCNOP22674 350 aa12.88□□□□□ -0.35
CLCNKA-201ENST00000331433 PSMB6P28072 239 aa12.88□□□□□ -0.35
CLCNKA-201ENST00000331433 OPRM1P35372 400 aa12.88□□□□□ -0.35
CLCNKA-201ENST00000331433 ARL6IP1Q15041 203 aa12.88□□□□□ -0.35
CLCNKA-201ENST00000331433 HES3Q5TGS1 186 aa12.88□□□□□ -0.35
CLCNKA-201ENST00000331433 LHFPL2Q6ZUX7 228 aa12.88□□□□□ -0.35
CLCNKA-201ENST00000331433 MOB3CQ70IA8 216 aa12.88□□□□□ -0.35
CLCNKA-201ENST00000331433 BATF2Q8N1L9 274 aa12.88□□□□□ -0.35
CLCNKA-201ENST00000331433 TMEM251Q8N6I4 163 aa12.88□□□□□ -0.35
CLCNKA-201ENST00000331433 SCGB3A2Q96PL1 93 aa12.88□□□□□ -0.35
CLCNKA-201ENST00000331433 ZNF471Q9BX82 626 aaPredicted RBP12.88□□□□□ -0.35
CLCNKA-201ENST00000331433 ABI3Q9P2A4 366 aa12.88□□□□□ -0.35
CLCNKA-201ENST00000331433 AK3Q9UIJ7 227 aa12.88□□□□□ -0.35
CLCNKA-201ENST00000331433 CSAG2Q9Y5P2 127 aa12.88□□□□□ -0.35
CLCNKA-201ENST00000331433 LINC01387J3KSC0 135 aa12.88□□□□□ -0.35
CLCNKA-201ENST00000331433 GEMIN2O14893 280 aaKnown RBP12.88□□□□□ -0.35
CLCNKA-201ENST00000331433 TNFSF15O95150 251 aa12.88□□□□□ -0.35
CLCNKA-201ENST00000331433 SFTPBP07988 381 aa12.88□□□□□ -0.35
CLCNKA-201ENST00000331433 ZNF708P17019 499 aa12.88□□□□□ -0.35
CLCNKA-201ENST00000331433 PLGLB1Q02325 96 aa12.88□□□□□ -0.35
CLCNKA-201ENST00000331433 PDCD1Q15116 288 aa12.88□□□□□ -0.35
CLCNKA-201ENST00000331433 PLCXD3Q63HM9 321 aa12.88□□□□□ -0.35
CLCNKA-201ENST00000331433 PDZD9Q8IXQ8 264 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms