RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 FLOT2Q14254 428 aa19.01■□□□□ 0.63
TMEM54-201ENST00000329151 ACP7Q6ZNF0 438 aa19.01■□□□□ 0.63
TMEM54-201ENST00000329151 ZNF573Q86YE8 665 aa19.01■□□□□ 0.63
TMEM54-201ENST00000329151 ZNF561Q8N587 486 aa19.01■□□□□ 0.63
TMEM54-201ENST00000329151 CANT1Q8WVQ1 401 aa19.01■□□□□ 0.63
TMEM54-201ENST00000329151 RORBQ92753 470 aa19.01■□□□□ 0.63
TMEM54-201ENST00000329151 NKX3-1Q99801 234 aaPredicted RBP19.01■□□□□ 0.63
TMEM54-201ENST00000329151 RANBP3Q9H6Z4 567 aaPredicted RBP19.01■□□□□ 0.63
TMEM54-201ENST00000329151 FAM206AQ9NX38 181 aa19.01■□□□□ 0.63
TMEM54-201ENST00000329151 TVP23BQ9NYZ1 205 aa19.01■□□□□ 0.63
TMEM54-201ENST00000329151 ZNF222Q9UK12 451 aa19.01■□□□□ 0.63
TMEM54-201ENST00000329151 POMPQ9Y244 141 aa19.01■□□□□ 0.63
TMEM54-201ENST00000329151 PRKDCP78527 4128 aaKnown RBP19.01■□□□□ 0.63
TMEM54-201ENST00000329151 COX7A1P24310 79 aa19■□□□□ 0.63
TMEM54-201ENST00000329151 KIR2DS4P43632 304 aa19■□□□□ 0.63
TMEM54-201ENST00000329151 HAAOP46952 286 aa19■□□□□ 0.63
TMEM54-201ENST00000329151 AANATQ16613 207 aa19■□□□□ 0.63
TMEM54-201ENST00000329151 DMRTC1Q5HYR2 192 aa19■□□□□ 0.63
TMEM54-201ENST00000329151 LIAT1Q6ZQX7 453 aa19■□□□□ 0.63
TMEM54-201ENST00000329151 TMEM179BQ7Z7N9 219 aa19■□□□□ 0.63
TMEM54-201ENST00000329151 SPATA24Q86W54 205 aa19■□□□□ 0.63
TMEM54-201ENST00000329151 MKXQ8IYA7 352 aa19■□□□□ 0.63
TMEM54-201ENST00000329151 ZNF679Q8IYX0 411 aa19■□□□□ 0.63
TMEM54-201ENST00000329151 POC1AQ8NBT0 407 aa19■□□□□ 0.63
TMEM54-201ENST00000329151 OR2T27Q8NH04 317 aa19■□□□□ 0.63
TMEM54-201ENST00000329151 OR5K1Q8NHB7 308 aa19■□□□□ 0.63
TMEM54-201ENST00000329151 CNN2Q99439 309 aaKnown RBP19■□□□□ 0.63
TMEM54-201ENST00000329151 TTTY10Q9BZA0 68 aa19■□□□□ 0.63
TMEM54-201ENST00000329151 SLC25A19Q9HC21 320 aa19■□□□□ 0.63
TMEM54-201ENST00000329151 C19orf12Q9NSK7 152 aa19■□□□□ 0.63
TMEM54-201ENST00000329151 USE1Q9NZ43 259 aa19■□□□□ 0.63
TMEM54-201ENST00000329151 H2AFY2Q9P0M6 372 aaPredicted RBP19■□□□□ 0.63
TMEM54-201ENST00000329151 OR14J1Q9UGF5 321 aa19■□□□□ 0.63
TMEM54-201ENST00000329151 DHRS3O75911 302 aa18.99■□□□□ 0.63
TMEM54-201ENST00000329151 PRDX2P32119 198 aa18.99■□□□□ 0.63
TMEM54-201ENST00000329151 ERVFRD-1P60508 538 aa18.99■□□□□ 0.63
TMEM54-201ENST00000329151 TMEM236Q5W0B7 351 aa18.99■□□□□ 0.63
TMEM54-201ENST00000329151 KLHDC1Q8N7A1 406 aa18.99■□□□□ 0.63
TMEM54-201ENST00000329151 C11orf44Q8N8P7 122 aa18.99■□□□□ 0.63
TMEM54-201ENST00000329151 DNAJC9Q8WXX5 260 aa18.99■□□□□ 0.63
TMEM54-201ENST00000329151 MEGF9Q9H1U4 602 aa18.99■□□□□ 0.63
TMEM54-201ENST00000329151 MOB1AQ9H8S9 216 aa18.99■□□□□ 0.63
TMEM54-201ENST00000329151 ABCB10Q9NRK6 738 aa18.99■□□□□ 0.63
TMEM54-201ENST00000329151 NUFIP1Q9UHK0 495 aaKnown RBP18.99■□□□□ 0.63
TMEM54-201ENST00000329151 SIGLEC9Q9Y336 463 aa18.99■□□□□ 0.63
TMEM54-201ENST00000329151 LOC110117498-PIK3R3F6TDL0 507 aa18.98■□□□□ 0.63
TMEM54-201ENST00000329151 J3QT63 122 aa18.98■□□□□ 0.63
TMEM54-201ENST00000329151 PEX14O75381 377 aa18.98■□□□□ 0.63
TMEM54-201ENST00000329151 VSIG10L2P0DP72 767 aa18.98■□□□□ 0.63
TMEM54-201ENST00000329151 PRKACGP22612 351 aa18.98■□□□□ 0.63
TMEM54-201ENST00000329151 SLC2A5P22732 501 aa18.98■□□□□ 0.63
TMEM54-201ENST00000329151 CLVS2Q5SYC1 327 aa18.98■□□□□ 0.63
TMEM54-201ENST00000329151 BCL2L15Q5TBC7 163 aa18.98■□□□□ 0.63
TMEM54-201ENST00000329151 HS3ST5Q8IZT8 346 aa18.98■□□□□ 0.63
TMEM54-201ENST00000329151 OR4M1Q8NGD0 313 aa18.98■□□□□ 0.63
TMEM54-201ENST00000329151 C17orf50Q8WW18 174 aa18.98■□□□□ 0.63
TMEM54-201ENST00000329151 OR8B4Q96RC9 309 aa18.98■□□□□ 0.63
TMEM54-201ENST00000329151 TEAD3Q99594 435 aa18.98■□□□□ 0.63
TMEM54-201ENST00000329151 PAPOLBQ9NRJ5 636 aaKnown RBP18.98■□□□□ 0.63
TMEM54-201ENST00000329151 EFNB2P52799 333 aa18.97■□□□□ 0.63
TMEM54-201ENST00000329151 CBX1P83916 185 aa18.97■□□□□ 0.63
TMEM54-201ENST00000329151 ARSJQ5FYB0 599 aaPredicted RBP18.97■□□□□ 0.63
TMEM54-201ENST00000329151 ASRGL1Q7L266 308 aa18.97■□□□□ 0.63
TMEM54-201ENST00000329151 ZNF488Q96MN9 340 aa18.97■□□□□ 0.63
TMEM54-201ENST00000329151 GPR173Q9NS66 373 aa18.97■□□□□ 0.63
TMEM54-201ENST00000329151 DNAJB9Q9UBS3 223 aa18.97■□□□□ 0.63
TMEM54-201ENST00000329151 PLXNB1O43157 2135 aa18.97■□□□□ 0.63
TMEM54-201ENST00000329151 PGA5P0DJD9 388 aa18.96■□□□□ 0.63
TMEM54-201ENST00000329151 ROM1Q03395 351 aa18.96■□□□□ 0.63
TMEM54-201ENST00000329151 TMEM200BQ69YZ2 307 aa18.96■□□□□ 0.63
TMEM54-201ENST00000329151 HCP5Q6MZN7 132 aa18.96■□□□□ 0.63
TMEM54-201ENST00000329151 KRT74Q7RTS7 529 aa18.96■□□□□ 0.63
TMEM54-201ENST00000329151 CD177Q8N6Q3 437 aa18.96■□□□□ 0.63
TMEM54-201ENST00000329151 PPP1R35Q8TAP8 253 aa18.96■□□□□ 0.63
TMEM54-201ENST00000329151 PLEKHA1Q9HB21 404 aa18.96■□□□□ 0.63
TMEM54-201ENST00000329151 FOXJ3Q9UPW0 622 aa18.96■□□□□ 0.63
TMEM54-201ENST00000329151 TCRBV3S1A0A5B6 114 aa18.95■□□□□ 0.62
TMEM54-201ENST00000329151 SYNGR1O43759 233 aa18.95■□□□□ 0.62
TMEM54-201ENST00000329151 PIPP12273 146 aaPredicted RBP18.95■□□□□ 0.62
TMEM54-201ENST00000329151 BMXP51813 675 aa18.95■□□□□ 0.62
TMEM54-201ENST00000329151 CRISP1P54107 249 aa18.95■□□□□ 0.62
TMEM54-201ENST00000329151 PLA1AQ53H76 456 aa18.95■□□□□ 0.62
TMEM54-201ENST00000329151 ZNF322Q6U7Q0 402 aaPredicted RBP18.95■□□□□ 0.62
TMEM54-201ENST00000329151 ZNF782Q6ZMW2 699 aaPredicted RBP18.95■□□□□ 0.62
TMEM54-201ENST00000329151 CCDC121Q6ZUS5 278 aa18.95■□□□□ 0.62
TMEM54-201ENST00000329151 ASCC1Q8N9N2 400 aaKnown RBP18.95■□□□□ 0.62
TMEM54-201ENST00000329151 FOXRED1Q96CU9 486 aaPredicted RBP18.95■□□□□ 0.62
TMEM54-201ENST00000329151 MNTQ99583 582 aa18.95■□□□□ 0.62
TMEM54-201ENST00000329151 SLC7A11Q9UPY5 501 aa18.95■□□□□ 0.62
TMEM54-201ENST00000329151 ZNF670-ZNF695F2Z2N8 137 aa18.94■□□□□ 0.62
TMEM54-201ENST00000329151 DLGAP1O14490 977 aa18.94■□□□□ 0.62
TMEM54-201ENST00000329151 OPN1MWP04001 364 aa18.94■□□□□ 0.62
TMEM54-201ENST00000329151 OPN1MW2P0DN77 364 aa18.94■□□□□ 0.62
TMEM54-201ENST00000329151 OPN1MW3P0DN78 364 aa18.94■□□□□ 0.62
TMEM54-201ENST00000329151 CEBPDP49716 269 aaPredicted RBP18.94■□□□□ 0.62
TMEM54-201ENST00000329151 CXCR4P61073 352 aa18.94■□□□□ 0.62
TMEM54-201ENST00000329151 MFGE8Q08431 387 aaPredicted RBP18.94■□□□□ 0.62
TMEM54-201ENST00000329151 OR13D1Q8NGV5 346 aa18.94■□□□□ 0.62
TMEM54-201ENST00000329151 PITPNC1Q9UKF7 332 aa18.94■□□□□ 0.62
TMEM54-201ENST00000329151 NOTCH3Q9UM47 2321 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms