RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 HIST1H3AP68431 136 aa10.46□□□□□ -0.73
SHMT2-201ENST00000328923 DUSP2Q05923 314 aa10.46□□□□□ -0.73
SHMT2-201ENST00000328923 ICAM4Q14773 271 aa10.46□□□□□ -0.73
SHMT2-201ENST00000328923 TAF9Q16594 264 aa10.46□□□□□ -0.73
SHMT2-201ENST00000328923 TMEM183BQ1AE95 376 aa10.46□□□□□ -0.73
SHMT2-201ENST00000328923 SLC48A1Q6P1K1 146 aa10.46□□□□□ -0.73
SHMT2-201ENST00000328923 MDGA2Q7Z553 956 aa10.46□□□□□ -0.73
SHMT2-201ENST00000328923 OR2D3Q8NGH3 330 aa10.46□□□□□ -0.73
SHMT2-201ENST00000328923 OR52E1Q8NGJ3 308 aa10.46□□□□□ -0.73
SHMT2-201ENST00000328923 OR10S1Q8NGN2 331 aa10.46□□□□□ -0.73
SHMT2-201ENST00000328923 ADAMTS15Q8TE58 950 aa10.46□□□□□ -0.73
SHMT2-201ENST00000328923 AQP3Q92482 292 aa10.46□□□□□ -0.73
SHMT2-201ENST00000328923 MOB3AQ96BX8 217 aa10.46□□□□□ -0.73
SHMT2-201ENST00000328923 OR6C3Q9NZP0 311 aa10.46□□□□□ -0.73
SHMT2-201ENST00000328923 CES1P1Q9UKY3 287 aa10.46□□□□□ -0.73
SHMT2-201ENST00000328923 ST3GAL6Q9Y274 331 aa10.46□□□□□ -0.73
SHMT2-201ENST00000328923 MED31Q9Y3C7 131 aa10.46□□□□□ -0.73
SHMT2-201ENST00000328923 STRAPQ9Y3F4 350 aaKnown RBP10.46□□□□□ -0.73
SHMT2-201ENST00000328923 RFNGQ9Y644 331 aa10.46□□□□□ -0.73
SHMT2-201ENST00000328923 DOCK8Q8NF50 2099 aa10.46□□□□□ -0.73
SHMT2-201ENST00000328923 IGHV2OR16-5A0A0B4J2B6 119 aa10.46□□□□□ -0.74
SHMT2-201ENST00000328923 MMP23AO75900 390 aa10.46□□□□□ -0.74
SHMT2-201ENST00000328923 OR6A2O95222 327 aa10.46□□□□□ -0.74
SHMT2-201ENST00000328923 PI3P19957 117 aa10.46□□□□□ -0.74
SHMT2-201ENST00000328923 RPS4Y1P22090 263 aaKnown RBP10.46□□□□□ -0.74
SHMT2-201ENST00000328923 HRH1P35367 487 aa10.46□□□□□ -0.74
SHMT2-201ENST00000328923 MPV17LQ2QL34 196 aa10.46□□□□□ -0.74
SHMT2-201ENST00000328923 ARHGAP11BQ3KRB8 267 aa10.46□□□□□ -0.74
SHMT2-201ENST00000328923 C9orf50Q5SZB4 431 aa10.46□□□□□ -0.74
SHMT2-201ENST00000328923 ASTLQ6HA08 431 aaPredicted RBP10.46□□□□□ -0.74
SHMT2-201ENST00000328923 CLEC18BQ6UXF7 455 aa10.46□□□□□ -0.74
SHMT2-201ENST00000328923 ZNF765Q7L2R6 523 aa10.46□□□□□ -0.74
SHMT2-201ENST00000328923 ERASQ7Z444 233 aa10.46□□□□□ -0.74
SHMT2-201ENST00000328923 OR51A4Q8NGJ6 313 aa10.46□□□□□ -0.74
SHMT2-201ENST00000328923 OR4D5Q8NGN0 318 aa10.46□□□□□ -0.74
SHMT2-201ENST00000328923 OR5AR1Q8NGP9 310 aa10.46□□□□□ -0.74
SHMT2-201ENST00000328923 RNF128Q8TEB7 428 aa10.46□□□□□ -0.74
SHMT2-201ENST00000328923 ZNRF4Q8WWF5 429 aa10.46□□□□□ -0.74
SHMT2-201ENST00000328923 PINX1Q96BK5 328 aaKnown RBP10.46□□□□□ -0.74
SHMT2-201ENST00000328923 SLC35A4Q96G79 324 aa10.46□□□□□ -0.74
SHMT2-201ENST00000328923 OR6C1Q96RD1 312 aa10.46□□□□□ -0.74
SHMT2-201ENST00000328923 VAMP8Q9BV40 100 aa10.46□□□□□ -0.74
SHMT2-201ENST00000328923 PLAGL1Q9UM63 463 aa10.46□□□□□ -0.74
SHMT2-201ENST00000328923 FUT9Q9Y231 359 aa10.46□□□□□ -0.74
SHMT2-201ENST00000328923 A0A1B0GU03 582 aa10.45□□□□□ -0.74
SHMT2-201ENST00000328923 YPEL1O60688 119 aa10.45□□□□□ -0.74
SHMT2-201ENST00000328923 RANP62826 216 aaKnown RBP10.45□□□□□ -0.74
SHMT2-201ENST00000328923 IL15RAQ13261 267 aa10.45□□□□□ -0.74
SHMT2-201ENST00000328923 RUNX2Q13950 521 aa10.45□□□□□ -0.74
SHMT2-201ENST00000328923 OR1Q1Q15612 314 aa10.45□□□□□ -0.74
SHMT2-201ENST00000328923 TPTE2P1Q5T6R2 138 aa10.45□□□□□ -0.74
SHMT2-201ENST00000328923 MYPOPQ86VE0 399 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-201ENST00000328923 ZNF547Q8IVP9 402 aa10.45□□□□□ -0.74
SHMT2-201ENST00000328923 NECAP1Q8NC96 275 aa10.45□□□□□ -0.74
SHMT2-201ENST00000328923 OR51A7Q8NH64 312 aa10.45□□□□□ -0.74
SHMT2-201ENST00000328923 YPEL2Q96QA6 119 aa10.45□□□□□ -0.74
SHMT2-201ENST00000328923 AICDAQ9GZX7 198 aa10.45□□□□□ -0.74
SHMT2-201ENST00000328923 SLC5A6Q9Y289 635 aa10.45□□□□□ -0.74
SHMT2-201ENST00000328923 LINC01553A4QN01 128 aa10.45□□□□□ -0.74
SHMT2-201ENST00000328923 B4DEV8 164 aa10.45□□□□□ -0.74
SHMT2-201ENST00000328923 NUPR1O60356 82 aa10.45□□□□□ -0.74
SHMT2-201ENST00000328923 HIST1H1TP22492 207 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-201ENST00000328923 CSNK1G2P78368 415 aa10.45□□□□□ -0.74
SHMT2-201ENST00000328923 RAB11BQ15907 218 aa10.45□□□□□ -0.74
SHMT2-201ENST00000328923 ZIC1Q15915 447 aa10.45□□□□□ -0.74
SHMT2-201ENST00000328923 CLEC12BQ2HXU8 276 aa10.45□□□□□ -0.74
SHMT2-201ENST00000328923 MFSD12Q6NUT3 480 aa10.45□□□□□ -0.74
SHMT2-201ENST00000328923 SYT13Q7L8C5 426 aa10.45□□□□□ -0.74
SHMT2-201ENST00000328923 C2orf73Q8N5S3 287 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-201ENST00000328923 NPEPL1Q8NDH3 523 aa10.45□□□□□ -0.74
SHMT2-201ENST00000328923 TMEM170AQ8WVE7 144 aa10.45□□□□□ -0.74
SHMT2-201ENST00000328923 TMEM234Q8WY98 164 aa10.45□□□□□ -0.74
SHMT2-201ENST00000328923 TMEM230Q96A57 120 aa10.45□□□□□ -0.74
SHMT2-201ENST00000328923 CCDC74AQ96AQ1 378 aa10.45□□□□□ -0.74
SHMT2-201ENST00000328923 PRAP1Q96NZ9 151 aa10.45□□□□□ -0.74
SHMT2-201ENST00000328923 MAGT1Q9H0U3 335 aa10.45□□□□□ -0.74
SHMT2-201ENST00000328923 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-201ENST00000328923 A0A1B0GVT2 93 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 A0A1W2PS29 197 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 GLOD5A6NK44 160 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 VSTM2BA6NLU5 285 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 K7N7A8 449 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 FGF17O60258 216 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 KNG1P01042 644 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 VIPR2P41587 438 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 BIDP55957 195 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 ERVS71-1P61550 626 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 NTHL1P78549 312 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 IL24Q13007 206 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 SMIM21Q3B7S5 101 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 CST9LP1Q5W188 147 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 SPSB3Q6PJ21 355 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 SAXO1Q8IYX7 474 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 TMEM256Q8N2U0 113 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 VN1R2Q8NFZ6 395 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 IRF7Q92985 503 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 SLC41A2Q96JW4 573 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 ZNF681Q96N22 645 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 ULBP3Q9BZM4 244 aa10.44□□□□□ -0.74
SHMT2-201ENST00000328923 MEGF9Q9H1U4 602 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms