RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 NOL4LQ96MY1 436 aaPredicted RBP11.22□□□□□ -0.61
CCDC60-201ENST00000327554 PECRQ9BY49 303 aa11.22□□□□□ -0.61
CCDC60-201ENST00000327554 RRAGCQ9HB90 399 aa11.22□□□□□ -0.61
CCDC60-201ENST00000327554 DECR2Q9NUI1 292 aa11.22□□□□□ -0.61
CCDC60-201ENST00000327554 ADAMTS9Q9P2N4 1935 aa11.22□□□□□ -0.61
CCDC60-201ENST00000327554 DHRS7CA6NNS2 312 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 H0Y8X5 98 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 DVL1O14640 695 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 EREGO14944 169 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 ATXN7O15265 892 aaPredicted RBP11.21□□□□□ -0.61
CCDC60-201ENST00000327554 PLRG1O43660 514 aaKnown RBP11.21□□□□□ -0.61
CCDC60-201ENST00000327554 NUDT14O95848 222 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 GP1BBP13224 206 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 ANOS1P23352 680 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 RGS19P49795 217 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 ASCL1P50553 236 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 IL13RA2Q14627 380 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 TMEM187Q14656 261 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 SP6Q3SY56 376 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 C4orf17Q53FE4 359 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 DNM1P34Q6PK57 102 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 SLC35E3Q7Z769 313 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 SFTPA2Q8IWL1 248 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 OR51T1Q8NGJ9 327 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 STT3BQ8TCJ2 826 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 POM121Q96HA1 1249 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 KCNK17Q96T54 332 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 RRP8O43159 456 aaKnown RBP11.21□□□□□ -0.61
CCDC60-201ENST00000327554 IL18BPO95998 194 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 HSPB1P04792 205 aaKnown RBP11.21□□□□□ -0.61
CCDC60-201ENST00000327554 HCKP08631 526 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 PGA4P0DJD7 388 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 PGA5P0DJD9 388 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 MYOGP15173 224 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 ZNF17P17021 662 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 BLVRBP30043 206 aaPredicted RBP11.21□□□□□ -0.61
CCDC60-201ENST00000327554 SLC37A1P57057 533 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 FAM189A2Q15884 450 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 ZNF506Q5JVG8 444 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 LYZL2Q7Z4W2 148 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 OR52M1Q8NGK5 317 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 C11orf40Q8WZ69 217 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 SNX22Q96L94 193 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 NIPSNAP3BQ9BS92 247 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 LIME1Q9H400 295 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 PADI1Q9ULC6 663 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 HSF4Q9ULV5 492 aa11.21□□□□□ -0.61
CCDC60-201ENST00000327554 A6NIZ1 184 aa11.2□□□□□ -0.62
CCDC60-201ENST00000327554 ZNF878C9JN71 531 aa11.2□□□□□ -0.62
CCDC60-201ENST00000327554 MS4A18H0YCH9 400 aa11.2□□□□□ -0.62
CCDC60-201ENST00000327554 GIMD1P0DJR0 217 aa11.2□□□□□ -0.62
CCDC60-201ENST00000327554 ATP6V0CP27449 155 aa11.2□□□□□ -0.62
CCDC60-201ENST00000327554 PPM1FP49593 454 aaPredicted RBP11.2□□□□□ -0.62
CCDC60-201ENST00000327554 RAP1BP61224 184 aa11.2□□□□□ -0.62
CCDC60-201ENST00000327554 PRTGQ2VWP7 1150 aa11.2□□□□□ -0.62
CCDC60-201ENST00000327554 MS4A18Q3C1V0 323 aa11.2□□□□□ -0.62
CCDC60-201ENST00000327554 CRIP3Q6Q6R5 217 aa11.2□□□□□ -0.62
CCDC60-201ENST00000327554 C1QL2Q7Z5L3 287 aa11.2□□□□□ -0.62
CCDC60-201ENST00000327554 ZFP62Q8NB50 900 aaPredicted RBP11.2□□□□□ -0.62
CCDC60-201ENST00000327554 OR2G3Q8NGZ4 309 aa11.2□□□□□ -0.62
CCDC60-201ENST00000327554 RNASEH2CQ8TDP1 164 aaKnown RBP11.2□□□□□ -0.62
CCDC60-201ENST00000327554 REEP6Q96HR9 211 aa11.2□□□□□ -0.62
CCDC60-201ENST00000327554 WSB1Q9Y6I7 421 aa11.2□□□□□ -0.62
CCDC60-201ENST00000327554 A0A087WZY1 265 aa11.2□□□□□ -0.62
CCDC60-201ENST00000327554 IGKV1-9A0A0C4DH69 117 aa11.2□□□□□ -0.62
CCDC60-201ENST00000327554 C17orf105B2RV13 164 aa11.2□□□□□ -0.62
CCDC60-201ENST00000327554 HNRNPA1P09651 372 aaKnown RBP eCLIP11.2□□□□□ -0.62
CCDC60-201ENST00000327554 OR5AC1P0C628 307 aa11.2□□□□□ -0.62
CCDC60-201ENST00000327554 RND2P52198 227 aa11.2□□□□□ -0.62
CCDC60-201ENST00000327554 POLR2HP52434 150 aaKnown RBP11.2□□□□□ -0.62
CCDC60-201ENST00000327554 RNF4P78317 190 aa11.2□□□□□ -0.62
CCDC60-201ENST00000327554 EWSR1Q01844 656 aaKnown RBP eCLIP11.2□□□□□ -0.62
CCDC60-201ENST00000327554 FZD2Q14332 565 aa11.2□□□□□ -0.62
CCDC60-201ENST00000327554 NFATC4Q14934 902 aa11.2□□□□□ -0.62
CCDC60-201ENST00000327554 CYB5R2Q6BCY4 276 aa11.2□□□□□ -0.62
CCDC60-201ENST00000327554 C1orf87Q8N0U7 546 aa11.2□□□□□ -0.62
CCDC60-201ENST00000327554 GPER1Q99527 375 aa11.2□□□□□ -0.62
CCDC60-201ENST00000327554 ZNF701Q9NV72 531 aaPredicted RBP11.2□□□□□ -0.62
CCDC60-201ENST00000327554 AK3Q9UIJ7 227 aa11.2□□□□□ -0.62
CCDC60-201ENST00000327554 PITPNC1Q9UKF7 332 aa11.2□□□□□ -0.62
CCDC60-201ENST00000327554 MCTS1Q9ULC4 181 aaKnown RBP11.2□□□□□ -0.62
CCDC60-201ENST00000327554 MYO7BQ6PIF6 2116 aa11.2□□□□□ -0.62
CCDC60-201ENST00000327554 LRP4O75096 1905 aa11.2□□□□□ -0.62
CCDC60-201ENST00000327554 ATG2AQ2TAZ0 1938 aa11.19□□□□□ -0.62
CCDC60-201ENST00000327554 MSTNO14793 375 aa11.19□□□□□ -0.62
CCDC60-201ENST00000327554 AMBPP02760 352 aa11.19□□□□□ -0.62
CCDC60-201ENST00000327554 PGCP20142 388 aa11.19□□□□□ -0.62
CCDC60-201ENST00000327554 APLNRP35414 380 aa11.19□□□□□ -0.62
CCDC60-201ENST00000327554 PIGPP57054 158 aa11.19□□□□□ -0.62
CCDC60-201ENST00000327554 TNFRSF9Q07011 255 aa11.19□□□□□ -0.62
CCDC60-201ENST00000327554 RTL10Q7L3V2 364 aa11.19□□□□□ -0.62
CCDC60-201ENST00000327554 BOD1Q96IK1 185 aa11.19□□□□□ -0.62
CCDC60-201ENST00000327554 C18orf12Q96KH6 178 aa11.19□□□□□ -0.62
CCDC60-201ENST00000327554 DDA1Q9BW61 102 aa11.19□□□□□ -0.62
CCDC60-201ENST00000327554 ACTR3CQ9C0K3 210 aaPredicted RBP11.19□□□□□ -0.62
CCDC60-201ENST00000327554 NAA60Q9H7X0 242 aa11.19□□□□□ -0.62
CCDC60-201ENST00000327554 ZNF319Q9P2F9 582 aa11.19□□□□□ -0.62
CCDC60-201ENST00000327554 BLACEA4D250 179 aa11.19□□□□□ -0.62
CCDC60-201ENST00000327554 SERPINE3A8MV23 424 aa11.19□□□□□ -0.62
CCDC60-201ENST00000327554 ST8SIA3O43173 380 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms