RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 L7N2F9 121 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 M0R233 179 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 ERVH48-1M5A8F1 160 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 XRCC2O43543 280 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 SERPINA5P05154 406 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 CXCL2P19875 107 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 MPZP25189 248 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 CD34P28906 385 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 OR3A3P47888 321 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 OR3A2P47893 321 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 NPY4RP50391 375 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 OR8B8Q15620 311 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 PLCXD3Q63HM9 321 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 TMEM42Q69YG0 159 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 OR8H3Q8N146 312 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 ZDHHC22Q8N966 263 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 OR5H2Q8NGV7 314 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 CASTOR1Q8WTX7 329 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 CPNE2Q96FN4 548 aaPredicted RBP6.56□□□□□ -1.36
IFT88-201ENST00000319980 WDYHV1Q96HA8 205 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 Q96M66 194 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 PRDM14Q9GZV8 571 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 FXYD6Q9H0Q3 95 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 MYOZ1Q9NP98 299 aaPredicted RBP6.56□□□□□ -1.36
IFT88-201ENST00000319980 ZNF581Q9P0T4 197 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 PRSS50Q9UI38 385 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 SLC7A11Q9UPY5 501 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 LAMA5O15230 3695 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 CCSO14618 274 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 NAT1P18440 290 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 WT1P19544 449 aaPredicted RBP6.56□□□□□ -1.36
IFT88-201ENST00000319980 SOX8P57073 446 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 LY6G6FQ5SQ64 297 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 COLCA1Q6ZS62 124 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 LHFPL2Q6ZUX7 228 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 ARRDC1Q8N5I2 433 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 CSNK2A3Q8NEV1 391 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 ST8SIA4Q92187 359 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 HDHD3Q9BSH5 251 aaPredicted RBP6.56□□□□□ -1.36
IFT88-201ENST00000319980 RNF122Q9H9V4 155 aa6.56□□□□□ -1.36
IFT88-201ENST00000319980 IGKV1-12A0A0C4DH73 117 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 ZNF816-ZNF321PA0A0X1KG74 233 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 C9orf170A2RU37 121 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 SLC22A20A6NK97 555 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 ZNF850A8MQ14 1090 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 MCRIP1C9JLW8 97 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 EFSO43281 561 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 CFDP00746 253 aaPredicted RBP6.55□□□□□ -1.36
IFT88-201ENST00000319980 IGKV1D-12P01611 117 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 PI3P19957 117 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 ZBTB25P24278 435 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 CBX5P45973 191 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 FUT6P51993 359 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 SEC61A1P61619 476 aaKnown RBP6.55□□□□□ -1.36
IFT88-201ENST00000319980 SORDQ00796 357 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 BAMBIQ13145 260 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 GK2Q14410 553 aaPredicted RBP6.55□□□□□ -1.36
IFT88-201ENST00000319980 HLXQ14774 488 aaPredicted RBP6.55□□□□□ -1.36
IFT88-201ENST00000319980 OPCMLQ14982 345 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 MPPED2Q15777 294 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 VAX1Q5SQQ9 334 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 BRICD5Q6PL45 260 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 LYG2Q86SG7 212 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 HOGA1Q86XE5 327 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 SEC22AQ96IW7 307 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 FAAP24Q9BTP7 215 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 PDCD10Q9BUL8 212 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 ZDHHC11Q9H8X9 412 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.55□□□□□ -1.36
IFT88-201ENST00000319980 ANAPC10Q9UM13 185 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 CACNA1AO00555 2505 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 DOCK7Q96N67 2140 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 ZNF292O60281 2723 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 FAM25EA8MYX2 175 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 GEMIN2O14893 280 aaKnown RBP6.55□□□□□ -1.36
IFT88-201ENST00000319980 NGFP01138 241 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 SFTPBP07988 381 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 ATP1B3P54709 279 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 GMFBP60983 142 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 PLP2Q04941 152 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 EXOSC2Q13868 293 aaKnown RBP6.55□□□□□ -1.36
IFT88-201ENST00000319980 ARL6IP1Q15041 203 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 PDCD1Q15116 288 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 PIGYQ3MUY2 71 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 LRRC37A5PQ49AS3 106 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 HIKESHIQ53FT3 197 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 ACTBL2Q562R1 376 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 SIGIRRQ6IA17 410 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 KCTD9Q7L273 389 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 CALHM1Q8IU99 346 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 BATF2Q8N1L9 274 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 OR56B2PQ8NGI1 322 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 OR51F2Q8NH61 342 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 PCNPQ8WW12 178 aaKnown RBP6.55□□□□□ -1.36
IFT88-201ENST00000319980 SPSB4Q96A44 273 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 PAPOLGQ9BWT3 736 aaKnown RBP6.55□□□□□ -1.36
IFT88-201ENST00000319980 TMPRSS13Q9BYE2 586 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 EHFQ9NZC4 300 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 KCNN3Q9UGI6 736 aa6.55□□□□□ -1.36
IFT88-201ENST00000319980 BOD1L1Q8NFC6 3051 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms