RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 A0A087X0M5 115 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 A0A1B0GX30 115 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 PPP1R2P9O14990 202 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 SCGNO76038 276 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 HEXBP07686 556 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 HOXC4P09017 264 aaPredicted RBP8.5□□□□□ -1.05
PTPRA-202ENST00000318266 OPRM1P35372 400 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 RRADP55042 308 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 NKX6-1P78426 367 aaPredicted RBP8.5□□□□□ -1.05
PTPRA-202ENST00000318266 HLA-DQA1Q5Y7H0 255 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 CYB5R2Q6BCY4 276 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 Q6ZSR6 202 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 SUMF1Q8NBK3 374 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 MUCL1Q96DR8 90 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 DUSP15Q9H1R2 295 aaPredicted RBP8.5□□□□□ -1.05
PTPRA-202ENST00000318266 SRPK3Q9UPE1 567 aa8.5□□□□□ -1.05
PTPRA-202ENST00000318266 C5orf63A6NC05 138 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 FIGNL2A6NMB9 653 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 F10P00742 488 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 MT-ATP6P00846 226 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 GUSBP08236 651 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 BIDP55957 195 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 ZNF124Q15973 351 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 FIP1L1Q6UN15 594 aaKnown RBP8.49□□□□□ -1.05
PTPRA-202ENST00000318266 FAM57BQ71RH2 274 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 OR52M1Q8NGK5 317 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 OR5L1Q8NGL2 311 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 MALSU1Q96EH3 234 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 URM1Q9BTM9 101 aaKnown RBP8.49□□□□□ -1.05
PTPRA-202ENST00000318266 CRLF2Q9HC73 371 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 LIPGQ9Y5X9 500 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 FAM221AA4D161 298 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 BTBD17A6NE02 478 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 STMND1H3BQB6 276 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 RER1O15258 196 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 TNFSF12O43508 249 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 NXPH3O95157 252 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 OR5AC1P0C628 307 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 HOXB2P14652 356 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 APOBEC1P41238 236 aaKnown RBP8.49□□□□□ -1.05
PTPRA-202ENST00000318266 SLC6A8P48029 635 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 RBP2P50120 134 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 POLR2HP52434 150 aaKnown RBP8.49□□□□□ -1.05
PTPRA-202ENST00000318266 PRSS12P56730 875 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 PIGPP57054 158 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 TAS2R46P59540 309 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 TLE3Q04726 772 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 SMAD4Q13485 552 aaKnown RBP8.49□□□□□ -1.05
PTPRA-202ENST00000318266 OR2T2Q6IF00 324 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 OGFOD3Q6PK18 319 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 BRICD5Q6PL45 260 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 NUP54Q7Z3B4 507 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 OR13H1Q8NG92 308 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 OR8B12Q8NGG6 310 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 ADAMTS18Q8TE60 1221 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 POM121Q96HA1 1249 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 SSX3Q99909 188 aa8.49□□□□□ -1.05
PTPRA-202ENST00000318266 NXT1Q9UKK6 140 aaKnown RBP8.49□□□□□ -1.05
PTPRA-202ENST00000318266 MS4A18H0YCH9 400 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 TMEM225BP0DP42 221 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 HIST1H1BP16401 226 aaKnown RBP8.48□□□□□ -1.05
PTPRA-202ENST00000318266 DDTP30046 118 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 ZNF121P58317 390 aaPredicted RBP8.48□□□□□ -1.05
PTPRA-202ENST00000318266 DLK1P80370 383 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 CHAF1BQ13112 559 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 MFAP5Q13361 173 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 MS4A18Q3C1V0 323 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 DNM1P34Q6PK57 102 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 SHISA6Q6ZSJ9 500 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 S100A13Q99584 98 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 ZNF581Q9P0T4 197 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 MCTS1Q9ULC4 181 aaKnown RBP8.48□□□□□ -1.05
PTPRA-202ENST00000318266 PADI1Q9ULC6 663 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 CEACAM18A8MTB9 384 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 ZNF587BE7ETH6 402 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 SEC11BP0C7V7 166 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 IGLV3-21P80748 117 aaPredicted RBP8.48□□□□□ -1.05
PTPRA-202ENST00000318266 ELOBQ15370 118 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 SSX2Q16385 188 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 MEX3BQ6ZN04 569 aaKnown RBP8.48□□□□□ -1.05
PTPRA-202ENST00000318266 ARHGEF39Q8N4T4 335 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 ASB10Q8WXI3 467 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 DYRK2Q92630 601 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 PIGTQ969N2 578 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 TCTN2Q96GX1 697 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 VN1R1Q9GZP7 353 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 IGKV1-9A0A0C4DH69 117 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 PHOX2AO14813 284 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 IFI6P09912 130 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 P2RY1P47900 373 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 AFF3P51826 1226 aaKnown RBP8.48□□□□□ -1.05
PTPRA-202ENST00000318266 HSD17B7P56937 341 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 LSM6P62312 80 aaKnown RBP8.48□□□□□ -1.05
PTPRA-202ENST00000318266 RAB1AP62820 205 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 HSF1Q00613 529 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 FBXW12Q6X9E4 464 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 C20orf196Q8IYI0 205 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 CYB561D1Q8N8Q1 229 aa8.48□□□□□ -1.05
PTPRA-202ENST00000318266 OR2G3Q8NGZ4 309 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms