RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 ARL16Q0P5N6 197 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 GRK1Q15835 563 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 TAAR6Q96RI8 345 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 SH2D2AQ9NP31 389 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 C1orf123Q9NWV4 160 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 PPP1R3CQ9UQK1 317 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 LRRC3CA6NJW4 275 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 TMEM210A6NLX4 147 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 HSPB6O14558 160 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 SUCLG1P53597 346 aaKnown RBP7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 HCCSP53701 268 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 SLC35B1P78383 322 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 TSC22D1Q15714 1073 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 CORO6Q6QEF8 472 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 LAX1Q8IWV1 398 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 FDCSPQ8NFU4 85 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 AKR7LQ8NHP1 331 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 SCMH1Q96GD3 660 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 GRAMD2BQ96HH9 432 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 PPA2Q9H2U2 334 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 SPTA1P02549 2419 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 LOC390937A0A1W2PQ73 354 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 NDUFA2O43678 99 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 SNRPBP14678 240 aaKnown RBP7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 AGTR1P30556 359 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 SELENOPP49908 381 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 TMEM267Q0VDI3 215 aaPredicted RBP7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 PCK2Q16822 640 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 PABPC1L2AQ5JQF8 200 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 SMIM15Q7Z3B0 74 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 CMBLQ96DG6 245 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 UCN2Q96RP3 112 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 PHOX2BQ99453 314 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 SLC25A21Q9BQT8 299 aaPredicted RBP7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 CHIAQ9BZP6 476 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 NPAP1Q9NZP6 1156 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 SMIM30A4D0T7 59 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 KNG1P01042 644 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 HLA-DOBP13765 273 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 ERHP84090 104 aaKnown RBP7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 SNRNP27Q8WVK2 155 aaKnown RBP7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 GPR137Q96N19 417 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 BEX2Q9BXY8 128 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 UNKLQ9H9P5 680 aaKnown RBP7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 TAS2R4Q9NYW5 299 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 OR6C3Q9NZP0 311 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 ACSM4P0C7M7 580 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 KIR2DS2P43631 304 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 LUMP51884 338 aaPredicted RBP7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 CEBPGP53567 150 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 BTG1P62324 171 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 AKIRIN2Q53H80 203 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 IGFL3Q6UXB1 125 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 RNASE6Q93091 150 aaKnown RBP7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 ZNF385AQ96PM9 386 aaKnown RBP7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 OR2H1Q9GZK4 316 aa7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 SF3B6Q9Y3B4 125 aaKnown RBP7.51□□□□□ -1.21
PDLIM5-201ENST00000317968 RALGAPA1Q6GYQ0 2036 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 K7EQM0 130 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 CTDSPLO15194 276 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 KCNJ3P48549 501 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 GPR157Q5UAW9 335 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 GLIPR1L1Q6UWM5 242 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 OR51D1Q8NGF3 324 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 OR56B4Q8NH76 319 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 LRRC29Q8WV35 223 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 NEU4Q8WWR8 484 aaPredicted RBP7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 SLC35E1Q96K37 410 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 DDOQ99489 341 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 SCN2AQ99250 2005 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 RPS10-NUDT3A0A1W2PQS6 291 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 RER1O15258 196 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 FOXH1O75593 365 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 H2AFB2P0C5Z0 115 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 KITLGP21583 273 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 HAAOP46952 286 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 VEGFCP49767 419 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 UTS2BQ765I0 119 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 TCTEX1D2Q8WW35 142 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 CHST6Q9GZX3 395 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 METTL17Q9H7H0 456 aaPredicted RBP7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 ZDHHC8Q9ULC8 765 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 UPK3AO75631 287 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 MMP15P51511 669 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 H3F3AP84243 136 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 MFGE8Q08431 387 aaPredicted RBP7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 MAB21L1Q13394 359 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 ANGPTL5Q86XS5 388 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 SIGLEC12Q96PQ1 595 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 ZNF665Q9H7R5 613 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 B9A039 149 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 J3QRE1 110 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 XRCC3O43542 346 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 IGFBP7Q16270 282 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 FAM74A1Q5RGS3 127 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 ZNF468Q5VIY5 522 aaPredicted RBP7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 HAGHLQ6PII5 290 aaPredicted RBP7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 FAM222BQ8WU58 562 aa7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 MRPL22Q9NWU5 206 aaKnown RBP7.5□□□□□ -1.21
PDLIM5-201ENST00000317968 FRRS1LQ9P0K9 344 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms