RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 TMEM204Q9BSN7 226 aa13.79□□□□□ -0.2
TUBB3-201ENST00000315491 PLEKHB1Q9UF11 243 aaPredicted RBP13.79□□□□□ -0.2
TUBB3-201ENST00000315491 HEATR1Q9H583 2144 aaKnown RBP13.79□□□□□ -0.2
TUBB3-201ENST00000315491 IGLV3-9A0A075B6K5 115 aa13.78□□□□□ -0.2
TUBB3-201ENST00000315491 IGHV3-13P01766 116 aa13.78□□□□□ -0.2
TUBB3-201ENST00000315491 ALDOBP05062 364 aa13.78□□□□□ -0.2
TUBB3-201ENST00000315491 HCKP08631 526 aa13.78□□□□□ -0.2
TUBB3-201ENST00000315491 PRF1P14222 555 aa13.78□□□□□ -0.2
TUBB3-201ENST00000315491 SELENOVP59797 346 aa13.78□□□□□ -0.2
TUBB3-201ENST00000315491 DMRTC1Q5HYR2 192 aa13.78□□□□□ -0.2
TUBB3-201ENST00000315491 GLT8D1Q68CQ7 371 aa13.78□□□□□ -0.2
TUBB3-201ENST00000315491 SFXN4Q6P4A7 337 aa13.78□□□□□ -0.2
TUBB3-201ENST00000315491 ZDHHC23Q8IYP9 409 aa13.78□□□□□ -0.2
TUBB3-201ENST00000315491 OR8G5Q8NG78 346 aa13.78□□□□□ -0.2
TUBB3-201ENST00000315491 OR8H1Q8NGG4 311 aa13.78□□□□□ -0.2
TUBB3-201ENST00000315491 OR52N4Q8NGI2 321 aa13.78□□□□□ -0.2
TUBB3-201ENST00000315491 NPRL2Q8WTW4 380 aa13.78□□□□□ -0.2
TUBB3-201ENST00000315491 AP3S1Q92572 193 aa13.78□□□□□ -0.2
TUBB3-201ENST00000315491 SPSB1Q96BD6 273 aa13.78□□□□□ -0.2
TUBB3-201ENST00000315491 MRPL37Q9BZE1 423 aaKnown RBP13.78□□□□□ -0.2
TUBB3-201ENST00000315491 MPC1Q9Y5U8 109 aa13.78□□□□□ -0.2
TUBB3-201ENST00000315491 VSTM5A8MXK1 200 aa13.78□□□□□ -0.2
TUBB3-201ENST00000315491 E7EQL1 145 aa13.78□□□□□ -0.2
TUBB3-201ENST00000315491 CA6P23280 308 aa13.78□□□□□ -0.2
TUBB3-201ENST00000315491 TMEM65Q6PI78 240 aa13.78□□□□□ -0.2
TUBB3-201ENST00000315491 C19orf18Q8NEA5 215 aa13.78□□□□□ -0.2
TUBB3-201ENST00000315491 NEUROG1Q92886 237 aa13.78□□□□□ -0.2
TUBB3-201ENST00000315491 RABL2AQ9UBK7 228 aaPredicted RBP13.78□□□□□ -0.2
TUBB3-201ENST00000315491 FBXO9Q9UK97 447 aaPredicted RBP13.78□□□□□ -0.2
TUBB3-201ENST00000315491 SLC7A11Q9UPY5 501 aa13.78□□□□□ -0.2
TUBB3-201ENST00000315491 OR4A8P0C604 315 aa13.77□□□□□ -0.21
TUBB3-201ENST00000315491 ARSBP15848 533 aa13.77□□□□□ -0.21
TUBB3-201ENST00000315491 DAZAP2Q15038 168 aaPredicted RBP13.77□□□□□ -0.21
TUBB3-201ENST00000315491 ADIPOQQ15848 244 aa13.77□□□□□ -0.21
TUBB3-201ENST00000315491 TRIQKQ629K1 86 aa13.77□□□□□ -0.21
TUBB3-201ENST00000315491 TEX261Q6UWH6 196 aa13.77□□□□□ -0.21
TUBB3-201ENST00000315491 JAGN1Q8N5M9 183 aa13.77□□□□□ -0.21
TUBB3-201ENST00000315491 TRMT10AQ8TBZ6 339 aaKnown RBP13.77□□□□□ -0.21
TUBB3-201ENST00000315491 DVL3Q92997 716 aaPredicted RBP13.77□□□□□ -0.21
TUBB3-201ENST00000315491 FOXRED1Q96CU9 486 aaPredicted RBP13.77□□□□□ -0.21
TUBB3-201ENST00000315491 HIST1H2AAQ96QV6 131 aa13.77□□□□□ -0.21
TUBB3-201ENST00000315491 TMEM100Q9NV29 134 aa13.77□□□□□ -0.21
TUBB3-201ENST00000315491 MYEF2Q9P2K5 600 aaKnown RBP13.77□□□□□ -0.21
TUBB3-201ENST00000315491 CGGBP1Q9UFW8 167 aaPredicted RBP13.77□□□□□ -0.21
TUBB3-201ENST00000315491 U3KQ87 197 aa13.77□□□□□ -0.21
TUBB3-201ENST00000315491 CADP27708 2225 aa13.76□□□□□ -0.21
TUBB3-201ENST00000315491 IFITM5A6NNB3 132 aa13.76□□□□□ -0.21
TUBB3-201ENST00000315491 AIPO00170 330 aa13.76□□□□□ -0.21
TUBB3-201ENST00000315491 LYRM1O43325 122 aa13.76□□□□□ -0.21
TUBB3-201ENST00000315491 CD37P11049 281 aa13.76□□□□□ -0.21
TUBB3-201ENST00000315491 ZNF93P35789 620 aaPredicted RBP13.76□□□□□ -0.21
TUBB3-201ENST00000315491 FUT6P51993 359 aa13.76□□□□□ -0.21
TUBB3-201ENST00000315491 CEACAM21Q3KPI0 293 aa13.76□□□□□ -0.21
TUBB3-201ENST00000315491 ZNF672Q499Z4 452 aaPredicted RBP13.76□□□□□ -0.21
TUBB3-201ENST00000315491 CLLU1Q5K131 121 aa13.76□□□□□ -0.21
TUBB3-201ENST00000315491 IDNKQ5T6J7 187 aa13.76□□□□□ -0.21
TUBB3-201ENST00000315491 HES5Q5TA89 166 aa13.76□□□□□ -0.21
TUBB3-201ENST00000315491 LYPD6Q86Y78 171 aa13.76□□□□□ -0.21
TUBB3-201ENST00000315491 CDH26Q8IXH8 852 aa13.76□□□□□ -0.21
TUBB3-201ENST00000315491 LILRB1Q8NHL6 650 aaPredicted RBP13.76□□□□□ -0.21
TUBB3-201ENST00000315491 HPSE2Q8WWQ2 592 aa13.76□□□□□ -0.21
TUBB3-201ENST00000315491 BORCS8Q96FH0 119 aa13.76□□□□□ -0.21
TUBB3-201ENST00000315491 SPACA5Q96QH8 159 aa13.76□□□□□ -0.21
TUBB3-201ENST00000315491 SPOCK3Q9BQ16 436 aa13.76□□□□□ -0.21
TUBB3-201ENST00000315491 PLK3Q9H4B4 646 aa13.76□□□□□ -0.21
TUBB3-201ENST00000315491 RANBP3Q9H6Z4 567 aaPredicted RBP13.76□□□□□ -0.21
TUBB3-201ENST00000315491 METTL17Q9H7H0 456 aaPredicted RBP13.76□□□□□ -0.21
TUBB3-201ENST00000315491 MCUBQ9NWR8 336 aa13.76□□□□□ -0.21
TUBB3-201ENST00000315491 TAAR3PQ9P1P4 343 aa13.76□□□□□ -0.21
TUBB3-201ENST00000315491 ING4Q9UNL4 249 aa13.76□□□□□ -0.21
TUBB3-201ENST00000315491 FAM240BA0A1B0GVZ2 78 aa13.76□□□□□ -0.21
TUBB3-201ENST00000315491 FAM230AA0A1W2PPH8 454 aa13.76□□□□□ -0.21
TUBB3-201ENST00000315491 SLC2A2P11168 524 aaPredicted RBP13.76□□□□□ -0.21
TUBB3-201ENST00000315491 AANATQ16613 207 aa13.76□□□□□ -0.21
TUBB3-201ENST00000315491 LHFPL2Q6ZUX7 228 aa13.76□□□□□ -0.21
TUBB3-201ENST00000315491 RNF144BQ7Z419 303 aa13.76□□□□□ -0.21
TUBB3-201ENST00000315491 ZNF680Q8NEM1 530 aa13.76□□□□□ -0.21
TUBB3-201ENST00000315491 OR5P3Q8WZ94 311 aa13.76□□□□□ -0.21
TUBB3-201ENST00000315491 CREB3L1Q96BA8 519 aa13.76□□□□□ -0.21
TUBB3-201ENST00000315491 NKX3-1Q99801 234 aaPredicted RBP13.76□□□□□ -0.21
TUBB3-201ENST00000315491 ADAT1Q9BUB4 502 aaKnown RBP13.76□□□□□ -0.21
TUBB3-201ENST00000315491 FGF23Q9GZV9 251 aaPredicted RBP13.76□□□□□ -0.21
TUBB3-201ENST00000315491 CISD1Q9NZ45 108 aaKnown RBP13.76□□□□□ -0.21
TUBB3-201ENST00000315491 SPTBN1Q01082 2364 aaKnown RBP13.75□□□□□ -0.21
TUBB3-201ENST00000315491 I3L521 148 aa13.75□□□□□ -0.21
TUBB3-201ENST00000315491 SLC17A2O00624 439 aa13.75□□□□□ -0.21
TUBB3-201ENST00000315491 APOBEC3AP31941 199 aaPredicted RBP13.75□□□□□ -0.21
TUBB3-201ENST00000315491 SERPINF1P36955 418 aa13.75□□□□□ -0.21
TUBB3-201ENST00000315491 MMP15P51511 669 aa13.75□□□□□ -0.21
TUBB3-201ENST00000315491 OR8G1Q15617 311 aa13.75□□□□□ -0.21
TUBB3-201ENST00000315491 KISS1Q15726 138 aa13.75□□□□□ -0.21
TUBB3-201ENST00000315491 C1orf100Q5SVJ3 147 aa13.75□□□□□ -0.21
TUBB3-201ENST00000315491 Q6ZR03 302 aa13.75□□□□□ -0.21
TUBB3-201ENST00000315491 OR5A2Q8NGI9 324 aa13.75□□□□□ -0.21
TUBB3-201ENST00000315491 OR13G1Q8NGZ3 307 aa13.75□□□□□ -0.21
TUBB3-201ENST00000315491 OR8S1Q8NH09 359 aa13.75□□□□□ -0.21
TUBB3-201ENST00000315491 UPRTQ96BW1 309 aa13.75□□□□□ -0.21
TUBB3-201ENST00000315491 MICU1Q9BPX6 476 aa13.75□□□□□ -0.21
TUBB3-201ENST00000315491 UQCC2Q9BRT2 126 aa13.75□□□□□ -0.21
TUBB3-201ENST00000315491 MSL2Q9HCI7 577 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms