RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 J3QT63 122 aa16.27■□□□□ 0.2
PDZRN3-202ENST00000308537 CDC42P60953 191 aa16.27■□□□□ 0.2
PDZRN3-202ENST00000308537 ERVK11-1P61568 191 aa16.27■□□□□ 0.2
PDZRN3-202ENST00000308537 FOXL1Q12952 345 aa16.27■□□□□ 0.2
PDZRN3-202ENST00000308537 C16orf87Q6PH81 154 aa16.27■□□□□ 0.2
PDZRN3-202ENST00000308537 CBR4Q8N4T8 237 aa16.27■□□□□ 0.2
PDZRN3-202ENST00000308537 CD177Q8N6Q3 437 aa16.27■□□□□ 0.2
PDZRN3-202ENST00000308537 C3orf56Q8N813 242 aa16.27■□□□□ 0.2
PDZRN3-202ENST00000308537 ZNF671Q8TAW3 534 aa16.27■□□□□ 0.2
PDZRN3-202ENST00000308537 GATAD2BQ8WXI9 593 aa16.27■□□□□ 0.2
PDZRN3-202ENST00000308537 TMIGD2Q96BF3 282 aa16.27■□□□□ 0.2
PDZRN3-202ENST00000308537 SLC29A1Q99808 456 aa16.27■□□□□ 0.2
PDZRN3-202ENST00000308537 NRIP2Q9BQI9 281 aa16.27■□□□□ 0.2
PDZRN3-202ENST00000308537 UNKLQ9H9P5 680 aaKnown RBP16.27■□□□□ 0.2
PDZRN3-202ENST00000308537 ELL3Q9HB65 397 aaPredicted RBP16.27■□□□□ 0.2
PDZRN3-202ENST00000308537 IGKV1-27A0A075B6S5 117 aa16.26■□□□□ 0.19
PDZRN3-202ENST00000308537 A0A0U1RQK1 487 aa16.26■□□□□ 0.19
PDZRN3-202ENST00000308537 A0A1B0GVI7 797 aa16.26■□□□□ 0.19
PDZRN3-202ENST00000308537 NKX6-3A6NJ46 265 aa16.26■□□□□ 0.19
PDZRN3-202ENST00000308537 HAAOP46952 286 aa16.26■□□□□ 0.19
PDZRN3-202ENST00000308537 RELBQ01201 579 aa16.26■□□□□ 0.19
PDZRN3-202ENST00000308537 UBE2V2Q15819 145 aa16.26■□□□□ 0.19
PDZRN3-202ENST00000308537 OCLNQ16625 522 aa16.26■□□□□ 0.19
PDZRN3-202ENST00000308537 ZIK1Q3SY52 487 aaPredicted RBP16.26■□□□□ 0.19
PDZRN3-202ENST00000308537 TP53I3Q53FA7 332 aa16.26■□□□□ 0.19
PDZRN3-202ENST00000308537 LDLRAD3Q86YD5 345 aa16.26■□□□□ 0.19
PDZRN3-202ENST00000308537 PDZD9Q8IXQ8 264 aa16.26■□□□□ 0.19
PDZRN3-202ENST00000308537 TMEM86BQ8N661 226 aa16.26■□□□□ 0.19
PDZRN3-202ENST00000308537 MED30Q96HR3 178 aa16.26■□□□□ 0.19
PDZRN3-202ENST00000308537 ZNF747Q9BV97 191 aa16.26■□□□□ 0.19
PDZRN3-202ENST00000308537 CHIAQ9BZP6 476 aa16.26■□□□□ 0.19
PDZRN3-202ENST00000308537 SIRT7Q9NRC8 400 aa16.26■□□□□ 0.19
PDZRN3-202ENST00000308537 PCDHGB1Q9Y5G3 927 aa16.26■□□□□ 0.19
PDZRN3-202ENST00000308537 CMYA5Q8N3K9 4069 aa16.25■□□□□ 0.19
PDZRN3-202ENST00000308537 H3BSH0 61 aa16.25■□□□□ 0.19
PDZRN3-202ENST00000308537 NANOS3P60323 173 aaKnown RBP16.25■□□□□ 0.19
PDZRN3-202ENST00000308537 ODF4Q2M2E3 257 aa16.25■□□□□ 0.19
PDZRN3-202ENST00000308537 HCP5Q6MZN7 132 aa16.25■□□□□ 0.19
PDZRN3-202ENST00000308537 C1orf122Q6ZSJ8 110 aa16.25■□□□□ 0.19
PDZRN3-202ENST00000308537 ZNF573Q86YE8 665 aa16.25■□□□□ 0.19
PDZRN3-202ENST00000308537 STMN2Q93045 179 aa16.25■□□□□ 0.19
PDZRN3-202ENST00000308537 RFKQ969G6 155 aa16.25■□□□□ 0.19
PDZRN3-202ENST00000308537 ZNF649Q9BS31 505 aa16.25■□□□□ 0.19
PDZRN3-202ENST00000308537 RASL12Q9NYN1 266 aa16.25■□□□□ 0.19
PDZRN3-202ENST00000308537 ONECUT1Q9UBC0 465 aa16.25■□□□□ 0.19
PDZRN3-202ENST00000308537 ANKRD61A6NGH8 418 aa16.24■□□□□ 0.19
PDZRN3-202ENST00000308537 RFPL4AA6NLU0 287 aa16.24■□□□□ 0.19
PDZRN3-202ENST00000308537 RFPL4AL1F8VTS6 287 aa16.24■□□□□ 0.19
PDZRN3-202ENST00000308537 F8VVB4 439 aa16.24■□□□□ 0.19
PDZRN3-202ENST00000308537 F8VWA3 439 aa16.24■□□□□ 0.19
PDZRN3-202ENST00000308537 GABRA2P47869 451 aa16.24■□□□□ 0.19
PDZRN3-202ENST00000308537 CEBPDP49716 269 aaPredicted RBP16.24■□□□□ 0.19
PDZRN3-202ENST00000308537 KLRD1Q13241 179 aa16.24■□□□□ 0.19
PDZRN3-202ENST00000308537 FDX2Q6P4F2 183 aa16.24■□□□□ 0.19
PDZRN3-202ENST00000308537 ANGPTL5Q86XS5 388 aa16.24■□□□□ 0.19
PDZRN3-202ENST00000308537 RDH10Q8IZV5 341 aa16.24■□□□□ 0.19
PDZRN3-202ENST00000308537 C11orf42Q8N5U0 333 aa16.24■□□□□ 0.19
PDZRN3-202ENST00000308537 RNFT2Q96EX2 444 aa16.24■□□□□ 0.19
PDZRN3-202ENST00000308537 CHST5Q9GZS9 411 aa16.24■□□□□ 0.19
PDZRN3-202ENST00000308537 S100A14Q9HCY8 104 aa16.24■□□□□ 0.19
PDZRN3-202ENST00000308537 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.24■□□□□ 0.19
PDZRN3-202ENST00000308537 EXOGQ9Y2C4 368 aaKnown RBP16.24■□□□□ 0.19
PDZRN3-202ENST00000308537 WNK1Q9H4A3 2382 aa16.24■□□□□ 0.19
PDZRN3-202ENST00000308537 LOC107986453A0A1B0GWG9 222 aa16.23■□□□□ 0.19
PDZRN3-202ENST00000308537 FAM181BA6NEQ2 426 aa16.23■□□□□ 0.19
PDZRN3-202ENST00000308537 M0R1W7 72 aa16.23■□□□□ 0.19
PDZRN3-202ENST00000308537 SYT7O43581 403 aa16.23■□□□□ 0.19
PDZRN3-202ENST00000308537 ENTHD1Q8IYW4 607 aa16.23■□□□□ 0.19
PDZRN3-202ENST00000308537 OR2G2Q8NGZ5 317 aa16.23■□□□□ 0.19
PDZRN3-202ENST00000308537 H1FXQ92522 213 aaKnown RBP16.23■□□□□ 0.19
PDZRN3-202ENST00000308537 ZDHHC16Q969W1 377 aa16.23■□□□□ 0.19
PDZRN3-202ENST00000308537 AJUBAQ96IF1 538 aa16.23■□□□□ 0.19
PDZRN3-202ENST00000308537 PKIBQ9C010 78 aa16.23■□□□□ 0.19
PDZRN3-202ENST00000308537 C19orf12Q9NSK7 152 aa16.23■□□□□ 0.19
PDZRN3-202ENST00000308537 IMPAD1Q9NX62 359 aa16.23■□□□□ 0.19
PDZRN3-202ENST00000308537 POMT1Q9Y6A1 747 aa16.23■□□□□ 0.19
PDZRN3-202ENST00000308537 IGKV1-9A0A0C4DH69 117 aa16.22■□□□□ 0.19
PDZRN3-202ENST00000308537 IGHV4-59P01825 116 aa16.22■□□□□ 0.19
PDZRN3-202ENST00000308537 NDUFB7P17568 137 aa16.22■□□□□ 0.19
PDZRN3-202ENST00000308537 MDKP21741 143 aaPredicted RBP16.22■□□□□ 0.19
PDZRN3-202ENST00000308537 IER3P46695 156 aa16.22■□□□□ 0.19
PDZRN3-202ENST00000308537 OR12D2P58182 307 aa16.22■□□□□ 0.19
PDZRN3-202ENST00000308537 IL24Q13007 206 aa16.22■□□□□ 0.19
PDZRN3-202ENST00000308537 SMIM21Q3B7S5 101 aa16.22■□□□□ 0.19
PDZRN3-202ENST00000308537 MEDAGQ5VYS4 303 aa16.22■□□□□ 0.19
PDZRN3-202ENST00000308537 BATF2Q8N1L9 274 aa16.22■□□□□ 0.19
PDZRN3-202ENST00000308537 PQLC1Q8N2U9 271 aa16.22■□□□□ 0.19
PDZRN3-202ENST00000308537 PNKDQ8N490 385 aa16.22■□□□□ 0.19
PDZRN3-202ENST00000308537 TMEM185AQ8NFB2 350 aa16.22■□□□□ 0.19
PDZRN3-202ENST00000308537 TRMT10AQ8TBZ6 339 aaKnown RBP16.22■□□□□ 0.19
PDZRN3-202ENST00000308537 LGALS12Q96DT0 336 aa16.22■□□□□ 0.19
PDZRN3-202ENST00000308537 ADAT3Q96EY9 351 aaPredicted RBP16.22■□□□□ 0.19
PDZRN3-202ENST00000308537 C9orf16Q9BUW7 83 aa16.22■□□□□ 0.19
PDZRN3-202ENST00000308537 MTCH1Q9NZJ7 389 aa16.22■□□□□ 0.19
PDZRN3-202ENST00000308537 FRRS1LQ9P0K9 344 aa16.22■□□□□ 0.19
PDZRN3-202ENST00000308537 GNG8Q9UK08 70 aa16.22■□□□□ 0.19
PDZRN3-202ENST00000308537 MMP24Q9Y5R2 645 aa16.22■□□□□ 0.19
PDZRN3-202ENST00000308537 TRBV23-1A0A0A0MS06 115 aa16.21■□□□□ 0.19
PDZRN3-202ENST00000308537 OMGP23515 440 aa16.21■□□□□ 0.19
PDZRN3-202ENST00000308537 PRDX2P32119 198 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms