RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 ZNF343Q6P1L6 599 aa12.85□□□□□ -0.35
PTPN9-201ENST00000306726 PAQR4Q8N4S7 273 aaPredicted RBP12.85□□□□□ -0.35
PTPN9-201ENST00000306726 RNF126Q9BV68 326 aa12.85□□□□□ -0.35
PTPN9-201ENST00000306726 AKIRIN1Q9H9L7 192 aaPredicted RBP12.85□□□□□ -0.35
PTPN9-201ENST00000306726 B3GALT5Q9Y2C3 310 aa12.85□□□□□ -0.35
PTPN9-201ENST00000306726 CEP192Q8TEP8 1941 aa12.85□□□□□ -0.35
PTPN9-201ENST00000306726 CELA2AP08217 269 aa12.85□□□□□ -0.35
PTPN9-201ENST00000306726 S100PP25815 95 aa12.85□□□□□ -0.35
PTPN9-201ENST00000306726 SOHLH1Q5JUK2 328 aa12.85□□□□□ -0.35
PTPN9-201ENST00000306726 GLYATL2Q8WU03 294 aa12.85□□□□□ -0.35
PTPN9-201ENST00000306726 COL25A1Q9BXS0 654 aaPredicted RBP12.85□□□□□ -0.35
PTPN9-201ENST00000306726 SERINC1Q9NRX5 453 aa12.85□□□□□ -0.35
PTPN9-201ENST00000306726 LPAR3Q9UBY5 353 aa12.85□□□□□ -0.35
PTPN9-201ENST00000306726 NDUFS6O75380 124 aaKnown RBP12.85□□□□□ -0.35
PTPN9-201ENST00000306726 PIAS2O75928 621 aa12.85□□□□□ -0.35
PTPN9-201ENST00000306726 CAPZBP47756 277 aa12.85□□□□□ -0.35
PTPN9-201ENST00000306726 DAP3P51398 398 aaKnown RBP12.85□□□□□ -0.35
PTPN9-201ENST00000306726 KISS1Q15726 138 aa12.85□□□□□ -0.35
PTPN9-201ENST00000306726 SUMF2Q8NBJ7 301 aa12.85□□□□□ -0.35
PTPN9-201ENST00000306726 OR13G1Q8NGZ3 307 aa12.85□□□□□ -0.35
PTPN9-201ENST00000306726 RARRES2Q99969 163 aa12.85□□□□□ -0.35
PTPN9-201ENST00000306726 SLC19A3Q9BZV2 496 aa12.85□□□□□ -0.35
PTPN9-201ENST00000306726 LRP4O75096 1905 aa12.84□□□□□ -0.35
PTPN9-201ENST00000306726 IGKV1D-8A0A087WSZ0 117 aa12.84□□□□□ -0.35
PTPN9-201ENST00000306726 FAM24AA6NFZ4 105 aa12.84□□□□□ -0.35
PTPN9-201ENST00000306726 NPIPA2E9PIF3 369 aa12.84□□□□□ -0.35
PTPN9-201ENST00000306726 NPIPA3F8WFD2 350 aa12.84□□□□□ -0.35
PTPN9-201ENST00000306726 OR5H8P0DN80 308 aa12.84□□□□□ -0.35
PTPN9-201ENST00000306726 HIST1H1DP16402 221 aaKnown RBP12.84□□□□□ -0.35
PTPN9-201ENST00000306726 ZNF845Q96IR2 970 aaPredicted RBP12.84□□□□□ -0.35
PTPN9-201ENST00000306726 A0A1B0GTQ1 180 aa12.84□□□□□ -0.35
PTPN9-201ENST00000306726 NPIPB9F8W1W9 429 aa12.84□□□□□ -0.35
PTPN9-201ENST00000306726 CDC14BO60729 498 aa12.84□□□□□ -0.35
PTPN9-201ENST00000306726 OR5AC1P0C628 307 aa12.84□□□□□ -0.35
PTPN9-201ENST00000306726 LRRC75AQ8NAA5 344 aa12.84□□□□□ -0.35
PTPN9-201ENST00000306726 UBAC2Q8NBM4 344 aa12.84□□□□□ -0.35
PTPN9-201ENST00000306726 OR6C1Q96RD1 312 aa12.84□□□□□ -0.35
PTPN9-201ENST00000306726 ABHD14AQ9BUJ0 271 aa12.84□□□□□ -0.35
PTPN9-201ENST00000306726 NCOA6Q14686 2063 aaPredicted RBP12.84□□□□□ -0.35
PTPN9-201ENST00000306726 CACNA1HO95180 2353 aa12.84□□□□□ -0.35
PTPN9-201ENST00000306726 PKDREJQ9NTG1 2253 aa12.84□□□□□ -0.35
PTPN9-201ENST00000306726 A0A0U1RQK1 487 aa12.84□□□□□ -0.35
PTPN9-201ENST00000306726 A6NCN8 305 aa12.84□□□□□ -0.35
PTPN9-201ENST00000306726 WIPF3A6NGB9 483 aa12.84□□□□□ -0.35
PTPN9-201ENST00000306726 IGHG1P01857 330 aa12.84□□□□□ -0.35
PTPN9-201ENST00000306726 ACAA1P09110 424 aaPredicted RBP12.84□□□□□ -0.35
PTPN9-201ENST00000306726 RUNX1Q01196 453 aa12.84□□□□□ -0.35
PTPN9-201ENST00000306726 GUK1Q16774 197 aa12.84□□□□□ -0.35
PTPN9-201ENST00000306726 GGNBP1Q5YKI7 109 aa12.84□□□□□ -0.35
PTPN9-201ENST00000306726 SLC22A25Q6T423 547 aa12.84□□□□□ -0.35
PTPN9-201ENST00000306726 GPR137CQ8N3F9 429 aa12.84□□□□□ -0.35
PTPN9-201ENST00000306726 OR51H1Q8NH63 302 aa12.84□□□□□ -0.35
PTPN9-201ENST00000306726 DDIT4LQ96D03 193 aa12.84□□□□□ -0.35
PTPN9-201ENST00000306726 ALKBH3Q96Q83 286 aaPredicted RBP12.84□□□□□ -0.35
PTPN9-201ENST00000306726 ZNF705GA8MUZ8 300 aaPredicted RBP12.83□□□□□ -0.36
PTPN9-201ENST00000306726 IFNA2P01563 188 aa12.83□□□□□ -0.36
PTPN9-201ENST00000306726 TAGLN2P37802 199 aaKnown RBP12.83□□□□□ -0.36
PTPN9-201ENST00000306726 MPPED2Q15777 294 aa12.83□□□□□ -0.36
PTPN9-201ENST00000306726 LCN15Q6UWW0 184 aa12.83□□□□□ -0.36
PTPN9-201ENST00000306726 OR56B1Q8NGI3 324 aa12.83□□□□□ -0.36
PTPN9-201ENST00000306726 UCN2Q96RP3 112 aa12.83□□□□□ -0.36
PTPN9-201ENST00000306726 FAM117AQ9C073 453 aa12.83□□□□□ -0.36
PTPN9-201ENST00000306726 LPAR5Q9H1C0 372 aa12.83□□□□□ -0.36
PTPN9-201ENST00000306726 G6PC2Q9NQR9 355 aa12.83□□□□□ -0.36
PTPN9-201ENST00000306726 SSSCA1O60232 199 aa12.83□□□□□ -0.36
PTPN9-201ENST00000306726 CFIP05156 583 aa12.83□□□□□ -0.36
PTPN9-201ENST00000306726 PET100P0DJ07 73 aa12.83□□□□□ -0.36
PTPN9-201ENST00000306726 EPHA8P29322 1005 aaPredicted RBP12.83□□□□□ -0.36
PTPN9-201ENST00000306726 PPP1CCP36873 323 aaKnown RBP12.83□□□□□ -0.36
PTPN9-201ENST00000306726 DUSP3P51452 185 aaPredicted RBP12.83□□□□□ -0.36
PTPN9-201ENST00000306726 LPAL2Q16609 132 aa12.83□□□□□ -0.36
PTPN9-201ENST00000306726 LILRB1Q8NHL6 650 aaPredicted RBP12.83□□□□□ -0.36
PTPN9-201ENST00000306726 CMTM3Q96MX0 182 aa12.83□□□□□ -0.36
PTPN9-201ENST00000306726 BORCS7-ASMTA0A0B4J1R7 106 aa12.83□□□□□ -0.36
PTPN9-201ENST00000306726 LILRA5A6NI73 299 aa12.83□□□□□ -0.36
PTPN9-201ENST00000306726 OR2C1O95371 312 aa12.83□□□□□ -0.36
PTPN9-201ENST00000306726 MPLP40238 635 aa12.83□□□□□ -0.36
PTPN9-201ENST00000306726 TMEM50BP56557 158 aa12.83□□□□□ -0.36
PTPN9-201ENST00000306726 RAB2AP61019 212 aa12.83□□□□□ -0.36
PTPN9-201ENST00000306726 UBE2KP61086 200 aa12.83□□□□□ -0.36
PTPN9-201ENST00000306726 RNF4P78317 190 aa12.83□□□□□ -0.36
PTPN9-201ENST00000306726 C2orf50Q96LR7 162 aa12.83□□□□□ -0.36
PTPN9-201ENST00000306726 SLCO5A1Q9H2Y9 848 aa12.83□□□□□ -0.36
PTPN9-201ENST00000306726 COL6A3P12111 3177 aa12.82□□□□□ -0.36
PTPN9-201ENST00000306726 DHRS7CA6NNS2 312 aa12.82□□□□□ -0.36
PTPN9-201ENST00000306726 HSD17B6O14756 317 aa12.82□□□□□ -0.36
PTPN9-201ENST00000306726 CD37P11049 281 aa12.82□□□□□ -0.36
PTPN9-201ENST00000306726 PTAFRP25105 342 aa12.82□□□□□ -0.36
PTPN9-201ENST00000306726 FASLGP48023 281 aa12.82□□□□□ -0.36
PTPN9-201ENST00000306726 P2RY4P51582 365 aa12.82□□□□□ -0.36
PTPN9-201ENST00000306726 GNMTQ14749 295 aa12.82□□□□□ -0.36
PTPN9-201ENST00000306726 RPUSD3Q6P087 351 aaKnown RBP12.82□□□□□ -0.36
PTPN9-201ENST00000306726 BEND4Q6ZU67 534 aa12.82□□□□□ -0.36
PTPN9-201ENST00000306726 RTN4IP1Q8WWV3 396 aaPredicted RBP12.82□□□□□ -0.36
PTPN9-201ENST00000306726 THADAQ6YHU6 1953 aa12.82□□□□□ -0.36
PTPN9-201ENST00000306726 MS4A18H0YCH9 400 aa12.82□□□□□ -0.36
PTPN9-201ENST00000306726 TLX3O43711 291 aaPredicted RBP12.82□□□□□ -0.36
PTPN9-201ENST00000306726 MRPS34P82930 218 aaKnown RBP12.82□□□□□ -0.36
PTPN9-201ENST00000306726 MS4A18Q3C1V0 323 aa12.82□□□□□ -0.36
PTPN9-201ENST00000306726 OR2G3Q8NGZ4 309 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 373.3 ms