RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 SURF2Q15527 256 aaPredicted RBP13.21□□□□□ -0.29
CSDC2-201ENST00000306149 SEMA6DQ8NFY4 1073 aa13.21□□□□□ -0.29
CSDC2-201ENST00000306149 DYRK2Q92630 601 aa13.21□□□□□ -0.29
CSDC2-201ENST00000306149 HAS2Q92819 552 aa13.21□□□□□ -0.29
CSDC2-201ENST00000306149 TMEM54Q969K7 222 aa13.21□□□□□ -0.29
CSDC2-201ENST00000306149 GHRLQ9UBU3 117 aa13.21□□□□□ -0.29
CSDC2-201ENST00000306149 FAM96BQ9Y3D0 163 aa13.21□□□□□ -0.29
CSDC2-201ENST00000306149 FAM221AA4D161 298 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 MSTNO14793 375 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 TAAR5O14804 337 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 CFIP05156 583 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 HEXAP06865 529 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 RFC3P40938 356 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 ALDH3B1P43353 468 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 HGFACQ04756 655 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 OR2A2Q6IF42 318 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 IFI44Q8TCB0 444 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 NRIP2Q9BQI9 281 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 HS3ST3B1Q9Y662 390 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 ZDBF2Q9HCK1 2354 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 AHCTF1Q8WYP5 2266 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 A0A0U1RQV5 110 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 COX6A1P12074 109 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 NPBWR1P48145 328 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 CAV2P51636 162 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 C10orf128Q5T292 105 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 RPL7L1Q6DKI1 246 aaKnown RBP13.2□□□□□ -0.3
CSDC2-201ENST00000306149 OPN5Q6U736 354 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 YRDCQ86U90 279 aaKnown RBP13.2□□□□□ -0.3
CSDC2-201ENST00000306149 EMG1Q92979 244 aaKnown RBP13.2□□□□□ -0.3
CSDC2-201ENST00000306149 CPNE2Q96FN4 548 aaPredicted RBP13.2□□□□□ -0.3
CSDC2-201ENST00000306149 LIME1Q9H400 295 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 MEMO1Q9Y316 297 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 KLF7O75840 302 aaPredicted RBP13.2□□□□□ -0.3
CSDC2-201ENST00000306149 ONECUT2O95948 504 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 CPT2P23786 658 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 RAB13P51153 203 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 ZNF84P51523 738 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 PDCD1Q15116 288 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 EIF5AL1Q6IS14 154 aaKnown RBP13.2□□□□□ -0.3
CSDC2-201ENST00000306149 ZNF774Q6NX45 483 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 CLEC9AQ6UXN8 241 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 BATF2Q8N1L9 274 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 IMMP1LQ96LU5 166 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 RHOFQ9HBH0 211 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 ZFP57Q9NU63 452 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 RCC2Q9P258 522 aaKnown RBP13.2□□□□□ -0.3
CSDC2-201ENST00000306149 ATPIF1Q9UII2 106 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 SIT1Q9Y3P8 196 aa13.2□□□□□ -0.3
CSDC2-201ENST00000306149 A0A0G2JMM0 328 aa13.19□□□□□ -0.3
CSDC2-201ENST00000306149 A0A1W2PPB8 328 aa13.19□□□□□ -0.3
CSDC2-201ENST00000306149 A0A1W2PRS3 328 aa13.19□□□□□ -0.3
CSDC2-201ENST00000306149 KIR3DP1A8MWS1 328 aa13.19□□□□□ -0.3
CSDC2-201ENST00000306149 RBM39Q14498 530 aaKnown RBP13.19□□□□□ -0.3
CSDC2-201ENST00000306149 IAH1Q2TAA2 248 aaPredicted RBP13.19□□□□□ -0.3
CSDC2-201ENST00000306149 ZNF528Q3MIS6 628 aa13.19□□□□□ -0.3
CSDC2-201ENST00000306149 PP6455Q8WZ26 134 aa13.19□□□□□ -0.3
CSDC2-201ENST00000306149 CLDN23Q96B33 292 aa13.19□□□□□ -0.3
CSDC2-201ENST00000306149 ANGPTL4Q9BY76 406 aa13.19□□□□□ -0.3
CSDC2-201ENST00000306149 C14orf166Q9Y224 244 aaKnown RBP13.19□□□□□ -0.3
CSDC2-201ENST00000306149 PCDHGA1Q9Y5H4 931 aa13.19□□□□□ -0.3
CSDC2-201ENST00000306149 IGKV1-27A0A075B6S5 117 aa13.19□□□□□ -0.3
CSDC2-201ENST00000306149 SERPINE3A8MV23 424 aa13.19□□□□□ -0.3
CSDC2-201ENST00000306149 PATE3B3GLJ2 98 aa13.19□□□□□ -0.3
CSDC2-201ENST00000306149 ZNHIT1O43257 154 aa13.19□□□□□ -0.3
CSDC2-201ENST00000306149 KLK3P07288 261 aaPredicted RBP13.19□□□□□ -0.3
CSDC2-201ENST00000306149 MUC1P15941 1255 aaPredicted RBP13.19□□□□□ -0.3
CSDC2-201ENST00000306149 SSR4P51571 173 aa13.19□□□□□ -0.3
CSDC2-201ENST00000306149 DSCR4P56555 118 aaPredicted RBP13.19□□□□□ -0.3
CSDC2-201ENST00000306149 B2MP61769 119 aa13.19□□□□□ -0.3
CSDC2-201ENST00000306149 SP6Q3SY56 376 aa13.19□□□□□ -0.3
CSDC2-201ENST00000306149 MAML2Q8IZL2 1156 aaPredicted RBP13.19□□□□□ -0.3
CSDC2-201ENST00000306149 AKR7LQ8NHP1 331 aa13.19□□□□□ -0.3
CSDC2-201ENST00000306149 SMIM3Q9BZL3 60 aa13.19□□□□□ -0.3
CSDC2-201ENST00000306149 AGPAT2O15120 278 aa13.18□□□□□ -0.3
CSDC2-201ENST00000306149 EIF1BO60739 113 aaKnown RBP13.18□□□□□ -0.3
CSDC2-201ENST00000306149 LRP3O75074 770 aa13.18□□□□□ -0.3
CSDC2-201ENST00000306149 FBXO24O75426 580 aa13.18□□□□□ -0.3
CSDC2-201ENST00000306149 CA11O75493 328 aa13.18□□□□□ -0.3
CSDC2-201ENST00000306149 OTX1P32242 354 aaPredicted RBP13.18□□□□□ -0.3
CSDC2-201ENST00000306149 SPEM2Q0P670 501 aa13.18□□□□□ -0.3
CSDC2-201ENST00000306149 CDCP2Q5VXM1 449 aa13.18□□□□□ -0.3
CSDC2-201ENST00000306149 RPUSD3Q6P087 351 aaKnown RBP13.18□□□□□ -0.3
CSDC2-201ENST00000306149 SLC16A14Q7RTX9 510 aa13.18□□□□□ -0.3
CSDC2-201ENST00000306149 RPS19BP1Q86WX3 136 aaKnown RBP13.18□□□□□ -0.3
CSDC2-201ENST00000306149 TOMM40LQ969M1 308 aa13.18□□□□□ -0.3
CSDC2-201ENST00000306149 ALKBH3Q96Q83 286 aaPredicted RBP13.18□□□□□ -0.3
CSDC2-201ENST00000306149 TM2D1Q9BX74 207 aa13.18□□□□□ -0.3
CSDC2-201ENST00000306149 CRLF2Q9HC73 371 aa13.18□□□□□ -0.3
CSDC2-201ENST00000306149 FOXD3Q9UJU5 478 aaPredicted RBP13.18□□□□□ -0.3
CSDC2-201ENST00000306149 LOC102723996A0A087X1L8 192 aa13.18□□□□□ -0.3
CSDC2-201ENST00000306149 CCDC85CA6NKD9 419 aa13.18□□□□□ -0.3
CSDC2-201ENST00000306149 F10P00742 488 aa13.18□□□□□ -0.3
CSDC2-201ENST00000306149 IFNA2P01563 188 aa13.18□□□□□ -0.3
CSDC2-201ENST00000306149 FGF5P12034 268 aa13.18□□□□□ -0.3
CSDC2-201ENST00000306149 B4GALT1P15291 398 aa13.18□□□□□ -0.3
CSDC2-201ENST00000306149 NME2P22392 152 aa13.18□□□□□ -0.3
CSDC2-201ENST00000306149 RBMXP38159 391 aaKnown RBP13.18□□□□□ -0.3
CSDC2-201ENST00000306149 ECI1P42126 302 aa13.18□□□□□ -0.3
CSDC2-201ENST00000306149 ID4P47928 161 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms