RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 C8orf46Q8TAG6 207 aa21.81■■□□□ 1.08
CDKN2A-201ENST00000304494 LHX4Q969G2 390 aa21.81■■□□□ 1.08
CDKN2A-201ENST00000304494 NOX4Q9NPH5 578 aa21.81■■□□□ 1.08
CDKN2A-201ENST00000304494 SLC7A11Q9UPY5 501 aa21.81■■□□□ 1.08
CDKN2A-201ENST00000304494 IGKV1D-17A0A075B6S4 117 aa21.8■■□□□ 1.08
CDKN2A-201ENST00000304494 IGHV1-69DA0A0B4J2H0 117 aa21.8■■□□□ 1.08
CDKN2A-201ENST00000304494 IGHV1-69P01742 117 aa21.8■■□□□ 1.08
CDKN2A-201ENST00000304494 RUSC1-AS1Q66K80 236 aa21.8■■□□□ 1.08
CDKN2A-201ENST00000304494 VMO1Q7Z5L0 202 aa21.8■■□□□ 1.08
CDKN2A-201ENST00000304494 PRSS35Q8N3Z0 413 aa21.8■■□□□ 1.08
CDKN2A-201ENST00000304494 C3orf56Q8N813 242 aa21.8■■□□□ 1.08
CDKN2A-201ENST00000304494 C10orf35Q96D05 121 aa21.8■■□□□ 1.08
CDKN2A-201ENST00000304494 MYCBPQ99417 103 aaPredicted RBP21.8■■□□□ 1.08
CDKN2A-201ENST00000304494 MDFIC2A0A1B0GVS7 189 aa21.79■■□□□ 1.08
CDKN2A-201ENST00000304494 J3QRE1 110 aa21.79■■□□□ 1.08
CDKN2A-201ENST00000304494 NOS1APO75052 506 aaPredicted RBP21.79■■□□□ 1.08
CDKN2A-201ENST00000304494 GATBO75879 557 aaKnown RBP21.79■■□□□ 1.08
CDKN2A-201ENST00000304494 TFF1P04155 84 aa21.79■■□□□ 1.08
CDKN2A-201ENST00000304494 PGA5P0DJD9 388 aa21.79■■□□□ 1.08
CDKN2A-201ENST00000304494 HKR1P10072 659 aa21.79■■□□□ 1.08
CDKN2A-201ENST00000304494 NDUFB7P17568 137 aa21.79■■□□□ 1.08
CDKN2A-201ENST00000304494 CFPP27918 469 aa21.79■■□□□ 1.08
CDKN2A-201ENST00000304494 ACP7Q6ZNF0 438 aa21.79■■□□□ 1.08
CDKN2A-201ENST00000304494 SDSLQ96GA7 329 aa21.79■■□□□ 1.08
CDKN2A-201ENST00000304494 Q96MT0 163 aa21.79■■□□□ 1.08
CDKN2A-201ENST00000304494 ZNF222Q9UK12 451 aa21.79■■□□□ 1.08
CDKN2A-201ENST00000304494 SLC16A6O15403 523 aa21.78■■□□□ 1.08
CDKN2A-201ENST00000304494 SYNGR1O43759 233 aa21.78■■□□□ 1.08
CDKN2A-201ENST00000304494 SERPINA3P01011 423 aa21.78■■□□□ 1.08
CDKN2A-201ENST00000304494 MPZP25189 248 aa21.78■■□□□ 1.08
CDKN2A-201ENST00000304494 FOXL1Q12952 345 aa21.78■■□□□ 1.08
CDKN2A-201ENST00000304494 ACBD7Q8N6N7 88 aa21.78■■□□□ 1.08
CDKN2A-201ENST00000304494 STMN2Q93045 179 aa21.78■■□□□ 1.08
CDKN2A-201ENST00000304494 MRPL48Q96GC5 212 aaKnown RBP21.78■■□□□ 1.08
CDKN2A-201ENST00000304494 SLC29A1Q99808 456 aa21.78■■□□□ 1.08
CDKN2A-201ENST00000304494 EXOGQ9Y2C4 368 aaKnown RBP21.78■■□□□ 1.08
CDKN2A-201ENST00000304494 LOC107986453A0A1B0GWG9 222 aa21.77■■□□□ 1.08
CDKN2A-201ENST00000304494 HOXA3O43365 443 aaPredicted RBP21.77■■□□□ 1.08
CDKN2A-201ENST00000304494 NXPH2O95156 264 aa21.77■■□□□ 1.08
CDKN2A-201ENST00000304494 ACTA2P62736 377 aa21.77■■□□□ 1.08
CDKN2A-201ENST00000304494 ACTG2P63267 376 aa21.77■■□□□ 1.08
CDKN2A-201ENST00000304494 AWAT1Q58HT5 328 aa21.77■■□□□ 1.08
CDKN2A-201ENST00000304494 TMEM244Q5VVB8 128 aa21.77■■□□□ 1.08
CDKN2A-201ENST00000304494 METAP1DQ6UB28 335 aaPredicted RBP21.77■■□□□ 1.08
CDKN2A-201ENST00000304494 Q6YL49 198 aa21.77■■□□□ 1.08
CDKN2A-201ENST00000304494 ENTHD1Q8IYW4 607 aa21.77■■□□□ 1.08
CDKN2A-201ENST00000304494 ZNRF1Q8ND25 227 aa21.77■■□□□ 1.08
CDKN2A-201ENST00000304494 TMEM185AQ8NFB2 350 aa21.77■■□□□ 1.08
CDKN2A-201ENST00000304494 TRMT10AQ8TBZ6 339 aaKnown RBP21.77■■□□□ 1.08
CDKN2A-201ENST00000304494 ZNF488Q96MN9 340 aa21.77■■□□□ 1.08
CDKN2A-201ENST00000304494 NRIP2Q9BQI9 281 aa21.77■■□□□ 1.08
CDKN2A-201ENST00000304494 PKIBQ9C010 78 aa21.77■■□□□ 1.08
CDKN2A-201ENST00000304494 CHST5Q9GZS9 411 aa21.77■■□□□ 1.08
CDKN2A-201ENST00000304494 MAB21L2Q9Y586 359 aa21.77■■□□□ 1.08
CDKN2A-201ENST00000304494 LOC100130705A0A1B0GUX0 176 aa21.76■■□□□ 1.07
CDKN2A-201ENST00000304494 FAM230AA0A1W2PPH8 454 aa21.76■■□□□ 1.07
CDKN2A-201ENST00000304494 A0A1W2PQ09 198 aa21.76■■□□□ 1.07
CDKN2A-201ENST00000304494 RFPL4AA6NLU0 287 aa21.76■■□□□ 1.07
CDKN2A-201ENST00000304494 RFPL4AL1F8VTS6 287 aa21.76■■□□□ 1.07
CDKN2A-201ENST00000304494 H3BSH0 61 aa21.76■■□□□ 1.07
CDKN2A-201ENST00000304494 BAG2O95816 211 aa21.76■■□□□ 1.07
CDKN2A-201ENST00000304494 GABRB1P18505 474 aa21.76■■□□□ 1.07
CDKN2A-201ENST00000304494 KIR3DL2P43630 455 aa21.76■■□□□ 1.07
CDKN2A-201ENST00000304494 IL24Q13007 206 aa21.76■■□□□ 1.07
CDKN2A-201ENST00000304494 FDX2Q6P4F2 183 aa21.76■■□□□ 1.07
CDKN2A-201ENST00000304494 C1orf122Q6ZSJ8 110 aa21.76■■□□□ 1.07
CDKN2A-201ENST00000304494 OR2G2Q8NGZ5 317 aa21.76■■□□□ 1.07
CDKN2A-201ENST00000304494 PP6455Q8WZ26 134 aa21.76■■□□□ 1.07
CDKN2A-201ENST00000304494 TRBV23-1A0A0A0MS06 115 aa21.75■■□□□ 1.07
CDKN2A-201ENST00000304494 SLC1A7O00341 560 aa21.75■■□□□ 1.07
CDKN2A-201ENST00000304494 DBTP11182 482 aaKnown RBP21.75■■□□□ 1.07
CDKN2A-201ENST00000304494 FUT6P51993 359 aa21.75■■□□□ 1.07
CDKN2A-201ENST00000304494 CAPZA1P52907 286 aa21.75■■□□□ 1.07
CDKN2A-201ENST00000304494 OR12D2P58182 307 aa21.75■■□□□ 1.07
CDKN2A-201ENST00000304494 GUCA2AQ02747 115 aa21.75■■□□□ 1.07
CDKN2A-201ENST00000304494 ZNF91Q05481 1191 aa21.75■■□□□ 1.07
CDKN2A-201ENST00000304494 UBE2V2Q15819 145 aa21.75■■□□□ 1.07
CDKN2A-201ENST00000304494 ANGPTL5Q86XS5 388 aa21.75■■□□□ 1.07
CDKN2A-201ENST00000304494 CALHM1Q8IU99 346 aa21.75■■□□□ 1.07
CDKN2A-201ENST00000304494 ZNF561Q8N587 486 aa21.75■■□□□ 1.07
CDKN2A-201ENST00000304494 TMEM86BQ8N661 226 aa21.75■■□□□ 1.07
CDKN2A-201ENST00000304494 RHOXF1Q8NHV9 184 aa21.75■■□□□ 1.07
CDKN2A-201ENST00000304494 RNF166Q96A37 237 aaPredicted RBP21.75■■□□□ 1.07
CDKN2A-201ENST00000304494 LGALS12Q96DT0 336 aa21.75■■□□□ 1.07
CDKN2A-201ENST00000304494 FAM118AQ9NWS6 357 aa21.75■■□□□ 1.07
CDKN2A-201ENST00000304494 M0R1W7 72 aa21.74■■□□□ 1.07
CDKN2A-201ENST00000304494 ISG15P05161 165 aa21.74■■□□□ 1.07
CDKN2A-201ENST00000304494 HTR1AP08908 422 aa21.74■■□□□ 1.07
CDKN2A-201ENST00000304494 PRDX2P32119 198 aa21.74■■□□□ 1.07
CDKN2A-201ENST00000304494 BLMHQ13867 455 aa21.74■■□□□ 1.07
CDKN2A-201ENST00000304494 CNN3Q15417 329 aaKnown RBP21.74■■□□□ 1.07
CDKN2A-201ENST00000304494 ZSCAN26Q16670 478 aa21.74■■□□□ 1.07
CDKN2A-201ENST00000304494 C16orf87Q6PH81 154 aa21.74■■□□□ 1.07
CDKN2A-201ENST00000304494 RDH10Q8IZV5 341 aa21.74■■□□□ 1.07
CDKN2A-201ENST00000304494 NPRL2Q8WTW4 380 aa21.74■■□□□ 1.07
CDKN2A-201ENST00000304494 HES4Q9HCC6 221 aa21.74■■□□□ 1.07
CDKN2A-201ENST00000304494 SIRT7Q9NRC8 400 aa21.74■■□□□ 1.07
CDKN2A-201ENST00000304494 FRRS1LQ9P0K9 344 aa21.74■■□□□ 1.07
CDKN2A-201ENST00000304494 AASSQ9UDR5 926 aa21.74■■□□□ 1.07
CDKN2A-201ENST00000304494 J3QLW9 94 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms