RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 NARFLQ9H6Q4 476 aa20.57■□□□□ 0.88
HOXC9-201ENST00000303450 TCF7L1Q9HCS4 588 aa20.57■□□□□ 0.88
HOXC9-201ENST00000303450 AKR7A2O43488 359 aa20.56■□□□□ 0.88
HOXC9-201ENST00000303450 SYNGR1O43759 233 aa20.56■□□□□ 0.88
HOXC9-201ENST00000303450 IGHV2-70P01814 119 aa20.56■□□□□ 0.88
HOXC9-201ENST00000303450 MAS1P04201 325 aa20.56■□□□□ 0.88
HOXC9-201ENST00000303450 ALDOBP05062 364 aa20.56■□□□□ 0.88
HOXC9-201ENST00000303450 JUNBP17275 347 aaPredicted RBP20.56■□□□□ 0.88
HOXC9-201ENST00000303450 USF1P22415 310 aaPredicted RBP20.56■□□□□ 0.88
HOXC9-201ENST00000303450 POU3F4P49335 361 aa20.56■□□□□ 0.88
HOXC9-201ENST00000303450 HOXA4Q00056 320 aaPredicted RBP20.56■□□□□ 0.88
HOXC9-201ENST00000303450 IL24Q13007 206 aa20.56■□□□□ 0.88
HOXC9-201ENST00000303450 ZMYND11Q15326 602 aa20.56■□□□□ 0.88
HOXC9-201ENST00000303450 DDI2Q5TDH0 399 aa20.56■□□□□ 0.88
HOXC9-201ENST00000303450 OR52N4Q8NGI2 321 aa20.56■□□□□ 0.88
HOXC9-201ENST00000303450 GPER1Q99527 375 aa20.56■□□□□ 0.88
HOXC9-201ENST00000303450 SRRM5B3KS81 715 aa20.55■□□□□ 0.88
HOXC9-201ENST00000303450 ARL6IP5O75915 188 aa20.55■□□□□ 0.88
HOXC9-201ENST00000303450 CYB5AP00167 134 aa20.55■□□□□ 0.88
HOXC9-201ENST00000303450 EGR1P18146 543 aa20.55■□□□□ 0.88
HOXC9-201ENST00000303450 CD80P33681 288 aa20.55■□□□□ 0.88
HOXC9-201ENST00000303450 MDH2P40926 338 aaKnown RBP20.55■□□□□ 0.88
HOXC9-201ENST00000303450 GMFBP60983 142 aa20.55■□□□□ 0.88
HOXC9-201ENST00000303450 SFRP4Q6FHJ7 346 aaPredicted RBP20.55■□□□□ 0.88
HOXC9-201ENST00000303450 SLC25A26Q70HW3 274 aa20.55■□□□□ 0.88
HOXC9-201ENST00000303450 C19orf18Q8NEA5 215 aa20.55■□□□□ 0.88
HOXC9-201ENST00000303450 PPIL3Q9H2H8 161 aaKnown RBP20.55■□□□□ 0.88
HOXC9-201ENST00000303450 IGHV4-61A0A0C4DH41 118 aa20.54■□□□□ 0.88
HOXC9-201ENST00000303450 TRDV1A0A1B0GX56 115 aa20.54■□□□□ 0.88
HOXC9-201ENST00000303450 C3orf80F5H4A9 247 aa20.54■□□□□ 0.88
HOXC9-201ENST00000303450 CD36P16671 472 aa20.54■□□□□ 0.88
HOXC9-201ENST00000303450 SRMP19623 302 aa20.54■□□□□ 0.88
HOXC9-201ENST00000303450 PDZK1IP1Q13113 114 aa20.54■□□□□ 0.88
HOXC9-201ENST00000303450 CD200R1LQ6Q8B3 271 aa20.54■□□□□ 0.88
HOXC9-201ENST00000303450 RNF144BQ7Z419 303 aa20.54■□□□□ 0.88
HOXC9-201ENST00000303450 LRRC28Q86X40 367 aaPredicted RBP20.54■□□□□ 0.88
HOXC9-201ENST00000303450 MUC20Q8N307 709 aaPredicted RBP20.54■□□□□ 0.88
HOXC9-201ENST00000303450 DEFB108BQ8NET1 73 aa20.54■□□□□ 0.88
HOXC9-201ENST00000303450 OR5D18Q8NGL1 313 aa20.54■□□□□ 0.88
HOXC9-201ENST00000303450 GAL3ST1Q99999 423 aa20.54■□□□□ 0.88
HOXC9-201ENST00000303450 SLITRK2Q9H156 845 aa20.54■□□□□ 0.88
HOXC9-201ENST00000303450 STUB1Q9UNE7 303 aa20.54■□□□□ 0.88
HOXC9-201ENST00000303450 OOEPA6NGQ2 149 aa20.53■□□□□ 0.88
HOXC9-201ENST00000303450 H7C1Q1 480 aa20.53■□□□□ 0.88
HOXC9-201ENST00000303450 LGALS8O00214 317 aa20.53■□□□□ 0.88
HOXC9-201ENST00000303450 WNT9BO14905 357 aa20.53■□□□□ 0.88
HOXC9-201ENST00000303450 GALP22466 123 aa20.53■□□□□ 0.88
HOXC9-201ENST00000303450 GLRA1P23415 457 aa20.53■□□□□ 0.88
HOXC9-201ENST00000303450 ZNF93P35789 620 aaPredicted RBP20.53■□□□□ 0.88
HOXC9-201ENST00000303450 MKXQ8IYA7 352 aa20.53■□□□□ 0.88
HOXC9-201ENST00000303450 TMEM165Q9HC07 324 aa20.53■□□□□ 0.88
HOXC9-201ENST00000303450 EXOSC4Q9NPD3 245 aaKnown RBP20.53■□□□□ 0.88
HOXC9-201ENST00000303450 TRAV38-1A0A0B4J264 116 aa20.53■□□□□ 0.88
HOXC9-201ENST00000303450 MEGF11A6BM72 1044 aa20.53■□□□□ 0.88
HOXC9-201ENST00000303450 SPRY1O43609 319 aaPredicted RBP20.53■□□□□ 0.88
HOXC9-201ENST00000303450 FSTL3O95633 263 aa20.53■□□□□ 0.88
HOXC9-201ENST00000303450 PGA5P0DJD9 388 aa20.53■□□□□ 0.88
HOXC9-201ENST00000303450 CALRP27797 417 aaKnown RBP20.53■□□□□ 0.88
HOXC9-201ENST00000303450 TMEM155Q4W5P6 130 aa20.53■□□□□ 0.88
HOXC9-201ENST00000303450 SPICQ8N5J4 248 aa20.53■□□□□ 0.88
HOXC9-201ENST00000303450 POC1AQ8NBT0 407 aa20.53■□□□□ 0.88
HOXC9-201ENST00000303450 SLAMF9Q96A28 289 aa20.53■□□□□ 0.88
HOXC9-201ENST00000303450 ZNF488Q96MN9 340 aa20.53■□□□□ 0.88
HOXC9-201ENST00000303450 WDR13Q9H1Z4 485 aa20.53■□□□□ 0.88
HOXC9-201ENST00000303450 DNAJB11Q9UBS4 358 aa20.53■□□□□ 0.88
HOXC9-201ENST00000303450 SSR3Q9UNL2 185 aa20.53■□□□□ 0.88
HOXC9-201ENST00000303450 A0A096LNT2 108 aa20.52■□□□□ 0.87
HOXC9-201ENST00000303450 LOXL1Q08397 574 aaPredicted RBP20.52■□□□□ 0.87
HOXC9-201ENST00000303450 KCNJ8Q15842 424 aa20.52■□□□□ 0.87
HOXC9-201ENST00000303450 MICBQ29980 383 aa20.52■□□□□ 0.87
HOXC9-201ENST00000303450 CRIP3Q6Q6R5 217 aa20.52■□□□□ 0.87
HOXC9-201ENST00000303450 NKAIN3Q8N8D7 197 aa20.52■□□□□ 0.87
HOXC9-201ENST00000303450 PNLDC1Q8NA58 520 aaKnown RBP20.52■□□□□ 0.87
HOXC9-201ENST00000303450 MAPK1IP1LQ8NDC0 245 aa20.52■□□□□ 0.87
HOXC9-201ENST00000303450 OR51F2Q8NH61 342 aa20.52■□□□□ 0.87
HOXC9-201ENST00000303450 CLDND2Q8NHS1 167 aa20.52■□□□□ 0.87
HOXC9-201ENST00000303450 TMIGD2Q96BF3 282 aa20.52■□□□□ 0.87
HOXC9-201ENST00000303450 MTCH1Q9NZJ7 389 aa20.52■□□□□ 0.87
HOXC9-201ENST00000303450 PCDHB10Q9UN67 800 aa20.52■□□□□ 0.87
HOXC9-201ENST00000303450 FLNAP21333 2647 aaKnown RBP20.52■□□□□ 0.87
HOXC9-201ENST00000303450 IGHV3OR15-7A0A075B7D8 119 aa20.51■□□□□ 0.87
HOXC9-201ENST00000303450 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP20.51■□□□□ 0.87
HOXC9-201ENST00000303450 SMAD7O15105 426 aaKnown RBP20.51■□□□□ 0.87
HOXC9-201ENST00000303450 NOS1APO75052 506 aaPredicted RBP20.51■□□□□ 0.87
HOXC9-201ENST00000303450 NXPH2O95156 264 aa20.51■□□□□ 0.87
HOXC9-201ENST00000303450 ACAA1P09110 424 aaPredicted RBP20.51■□□□□ 0.87
HOXC9-201ENST00000303450 TMEM225BP0DP42 221 aa20.51■□□□□ 0.87
HOXC9-201ENST00000303450 MUC1P15941 1255 aaPredicted RBP20.51■□□□□ 0.87
HOXC9-201ENST00000303450 ZNF404Q494X3 552 aa20.51■□□□□ 0.87
HOXC9-201ENST00000303450 TEX36Q5VZQ5 186 aa20.51■□□□□ 0.87
HOXC9-201ENST00000303450 C22orf42Q6IC83 251 aa20.51■□□□□ 0.87
HOXC9-201ENST00000303450 BATF2Q8N1L9 274 aa20.51■□□□□ 0.87
HOXC9-201ENST00000303450 CIARTQ8N365 385 aaPredicted RBP20.51■□□□□ 0.87
HOXC9-201ENST00000303450 JAGN1Q8N5M9 183 aa20.51■□□□□ 0.87
HOXC9-201ENST00000303450 SEH1LQ96EE3 360 aa20.51■□□□□ 0.87
HOXC9-201ENST00000303450 CEP19Q96LK0 163 aa20.51■□□□□ 0.87
HOXC9-201ENST00000303450 NRIP2Q9BQI9 281 aa20.51■□□□□ 0.87
HOXC9-201ENST00000303450 TMEM246Q9BRR3 403 aa20.51■□□□□ 0.87
HOXC9-201ENST00000303450 FAM192AQ9GZU8 254 aa20.51■□□□□ 0.87
HOXC9-201ENST00000303450 OR51E2Q9H255 320 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms