RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 CORTO00230 105 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 CBR3O75828 277 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 KLF7O75840 302 aaPredicted RBP9.32□□□□□ -0.92
CLIP1-201ENST00000302528 CST4P01036 141 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 IGHA1P01876 353 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 IGHA2P01877 340 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 SUCLG1P53597 346 aaKnown RBP9.32□□□□□ -0.92
CLIP1-201ENST00000302528 UBE2L3P68036 154 aaKnown RBP9.32□□□□□ -0.92
CLIP1-201ENST00000302528 C19orf54Q5BKX5 351 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 CCL17Q92583 94 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 RAB40CQ96S21 281 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 C6orf106Q9H6K1 298 aaPredicted RBP9.32□□□□□ -0.92
CLIP1-201ENST00000302528 AKIRIN1Q9H9L7 192 aaPredicted RBP9.32□□□□□ -0.92
CLIP1-201ENST00000302528 FGF22Q9HCT0 170 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 ING1Q9UK53 422 aaPredicted RBP9.32□□□□□ -0.92
CLIP1-201ENST00000302528 DUXBA0A1W2PPF3 345 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 A0A1W2PR48 441 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 FAM90A27PA6NNH2 459 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 GFYI3L273 518 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 ZNF83P51522 516 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 GNG3P63215 75 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 SMAGPQ0VAQ4 97 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 METRNLQ641Q3 311 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 ANKRD34AQ69YU3 496 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 MYOZ3Q8TDC0 251 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 DYNLRB2Q8TF09 96 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 OR4C12Q96R67 309 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 FOXB1Q99853 325 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 RSRP1Q9BUV0 290 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 MBNL1Q9NR56 388 aaKnown RBP9.32□□□□□ -0.92
CLIP1-201ENST00000302528 RASL12Q9NYN1 266 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 AKR7A2O43488 359 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 HRO43593 1189 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 ZNF26P17031 533 aaPredicted RBP9.32□□□□□ -0.92
CLIP1-201ENST00000302528 SNRPEP62304 92 aaKnown RBP9.32□□□□□ -0.92
CLIP1-201ENST00000302528 TNXAQ16473 311 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 SPINK9Q5DT21 86 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 TRAT1Q6PIZ9 186 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 TMEM179BQ7Z7N9 219 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 RFESDQ8TAC1 157 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 SLC25A33Q9BSK2 321 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 LPAR5Q9H1C0 372 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 TBC1D29Q9UFV1 150 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 HDGFL3Q9Y3E1 203 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 H0YIG0 161 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 PGA3P0DJD8 388 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 BTG2P78543 158 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 AMMECR1LQ6DCA0 310 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 C17orf99Q6UX52 265 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 ZNF547Q8IVP9 402 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 CA5BP1Q8WTZ4 195 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 C20orf27Q9GZN8 174 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 LTBP3Q9NS15 1303 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 MBLAC1A4D2B0 266 aaPredicted RBP9.32□□□□□ -0.92
CLIP1-201ENST00000302528 ZNF253O75346 499 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 DEDDO75618 318 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 AVPR2P30518 371 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 EVX1P49640 407 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 RIGQ13278 110 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 ARRDC1Q8N5I2 433 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 NOXO1Q8NFA2 376 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 PP6455Q8WZ26 134 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 SH2D2AQ9NP31 389 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 MMP26Q9NRE1 261 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 ERRFI1Q9UJM3 462 aaPredicted RBP9.32□□□□□ -0.92
CLIP1-201ENST00000302528 VSIG4Q9Y279 399 aa9.32□□□□□ -0.92
CLIP1-201ENST00000302528 A0A1B0GUL6 1792 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 OR4C46A6NHA9 309 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 ZNF324O75467 553 aaPredicted RBP9.31□□□□□ -0.92
CLIP1-201ENST00000302528 CDAP32320 146 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 FABP5Q01469 135 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 MORN1Q5T089 497 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 ZNF841Q6ZN19 808 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 PELI3Q8N2H9 469 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 OR5C1Q8NGR4 320 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 OR1F12Q8NHA8 337 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 HCSTQ9UBK5 93 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 TMED3Q9Y3Q3 217 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 MEX3AA1L020 520 aaKnown RBP9.31□□□□□ -0.92
CLIP1-201ENST00000302528 ACP1P24666 158 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 FPR2P25090 351 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 PPP1CCP36873 323 aaKnown RBP9.31□□□□□ -0.92
CLIP1-201ENST00000302528 ERVS71-1P61550 626 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 AQP6Q13520 282 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 OR10G4Q8NGN3 311 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 OR10G9Q8NGN4 311 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 OR10G7Q8NGN6 311 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 C16orf52Q8NHV5 167 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 LTB4R2Q9NPC1 389 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 MARCH5Q9NX47 278 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 A0A1W2PRD5 423 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 A0A1W2PRF3 423 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 A0A1W2PRM7 423 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 AP4M1O00189 453 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 PNLIPRP2P54317 469 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 FOXF1Q12946 379 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 TBC1D26Q86UD7 250 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 FAM24BQ8N5W8 94 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 CDCA4Q9BXL8 241 aa9.31□□□□□ -0.92
CLIP1-201ENST00000302528 FZR1Q9UM11 496 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms