RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 SMCHD1A6NHR9 2005 aa12.66□□□□□ -0.38
COL1A2-201ENST00000297268 FAM157BP0CG42 384 aa12.66□□□□□ -0.38
COL1A2-201ENST00000297268 PMCHP20382 165 aa12.66□□□□□ -0.38
COL1A2-201ENST00000297268 RAC1P63000 192 aa12.66□□□□□ -0.38
COL1A2-201ENST00000297268 HLA-DRB3P79483 266 aa12.66□□□□□ -0.38
COL1A2-201ENST00000297268 DUSP2Q05923 314 aa12.66□□□□□ -0.38
COL1A2-201ENST00000297268 CBLN3Q6UW01 205 aa12.66□□□□□ -0.38
COL1A2-201ENST00000297268 CLDN23Q96B33 292 aa12.66□□□□□ -0.38
COL1A2-201ENST00000297268 TWSG1Q9GZX9 223 aa12.66□□□□□ -0.38
COL1A2-201ENST00000297268 SLC52A3Q9NQ40 469 aa12.66□□□□□ -0.38
COL1A2-201ENST00000297268 SCN9AQ15858 1988 aa12.66□□□□□ -0.38
COL1A2-201ENST00000297268 MAP1LC3B2A6NCE7 125 aa12.66□□□□□ -0.38
COL1A2-201ENST00000297268 RBFOX3A6NFN3 312 aa12.66□□□□□ -0.38
COL1A2-201ENST00000297268 H3BMH7 237 aa12.66□□□□□ -0.38
COL1A2-201ENST00000297268 PMS2P11Q13670 270 aa12.66□□□□□ -0.38
COL1A2-201ENST00000297268 MAP1LC3BQ9GZQ8 125 aa12.66□□□□□ -0.38
COL1A2-201ENST00000297268 DECR2Q9NUI1 292 aa12.66□□□□□ -0.38
COL1A2-201ENST00000297268 AGFG1P52594 562 aaKnown RBP12.66□□□□□ -0.38
COL1A2-201ENST00000297268 RPS16P62249 146 aaKnown RBP12.66□□□□□ -0.38
COL1A2-201ENST00000297268 CEACAM16Q2WEN9 425 aa12.66□□□□□ -0.38
COL1A2-201ENST00000297268 PRR27Q6MZM9 219 aa12.66□□□□□ -0.38
COL1A2-201ENST00000297268 SLC25A42Q86VD7 318 aa12.66□□□□□ -0.38
COL1A2-201ENST00000297268 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.66□□□□□ -0.38
COL1A2-201ENST00000297268 TRIP11Q15643 1979 aa12.66□□□□□ -0.38
COL1A2-201ENST00000297268 A0A1W2PPC4 97 aa12.66□□□□□ -0.38
COL1A2-201ENST00000297268 C9orf152Q5JTZ5 239 aa12.66□□□□□ -0.38
COL1A2-201ENST00000297268 FAM162BQ5T6X4 162 aa12.66□□□□□ -0.38
COL1A2-201ENST00000297268 FBLIM1Q8WUP2 373 aa12.66□□□□□ -0.38
COL1A2-201ENST00000297268 ZNF355PQ9NSJ1 428 aa12.66□□□□□ -0.38
COL1A2-201ENST00000297268 A0A1W2PNV4 684 aa12.65□□□□□ -0.38
COL1A2-201ENST00000297268 ZNF98A6NK75 572 aa12.65□□□□□ -0.38
COL1A2-201ENST00000297268 ETFDHQ16134 617 aa12.65□□□□□ -0.38
COL1A2-201ENST00000297268 AMDHD2Q9Y303 409 aa12.65□□□□□ -0.38
COL1A2-201ENST00000297268 PCDHGA9Q9Y5G4 932 aaKnown RBP12.65□□□□□ -0.38
COL1A2-201ENST00000297268 JMJD6Q6NYC1 403 aaPredicted RBP12.65□□□□□ -0.38
COL1A2-201ENST00000297268 RAB40CQ96S21 281 aa12.65□□□□□ -0.38
COL1A2-201ENST00000297268 MIOXQ9UGB7 285 aa12.65□□□□□ -0.38
COL1A2-201ENST00000297268 C7orf77A4D0Y5 90 aa12.65□□□□□ -0.38
COL1A2-201ENST00000297268 CXCL2P19875 107 aa12.65□□□□□ -0.38
COL1A2-201ENST00000297268 HIST1H3AP68431 136 aa12.65□□□□□ -0.38
COL1A2-201ENST00000297268 MESTQ5EB52 335 aa12.65□□□□□ -0.38
COL1A2-201ENST00000297268 FFAR4Q5NUL3 377 aa12.65□□□□□ -0.38
COL1A2-201ENST00000297268 RPS4Y2Q8TD47 263 aa12.65□□□□□ -0.38
COL1A2-201ENST00000297268 S1PR3Q99500 378 aa12.65□□□□□ -0.38
COL1A2-201ENST00000297268 FOXB1Q99853 325 aa12.65□□□□□ -0.38
COL1A2-201ENST00000297268 GHITMQ9H3K2 345 aa12.65□□□□□ -0.38
COL1A2-201ENST00000297268 PLPP3O14495 311 aa12.65□□□□□ -0.38
COL1A2-201ENST00000297268 KRASP01116 189 aa12.65□□□□□ -0.38
COL1A2-201ENST00000297268 CT45A10P0DMU9 189 aa12.65□□□□□ -0.38
COL1A2-201ENST00000297268 RPL29P47914 159 aaKnown RBP12.65□□□□□ -0.38
COL1A2-201ENST00000297268 RRADP55042 308 aa12.65□□□□□ -0.38
COL1A2-201ENST00000297268 GALMQ96C23 342 aa12.65□□□□□ -0.38
COL1A2-201ENST00000297268 SPACA9Q96E40 222 aaPredicted RBP12.65□□□□□ -0.38
COL1A2-201ENST00000297268 MS4A10Q96PG2 267 aa12.65□□□□□ -0.38
COL1A2-201ENST00000297268 LRRC30A6NM36 301 aa12.64□□□□□ -0.39
COL1A2-201ENST00000297268 ZNF737O75373 536 aa12.64□□□□□ -0.39
COL1A2-201ENST00000297268 HSBP1O75506 76 aa12.64□□□□□ -0.39
COL1A2-201ENST00000297268 ZBTB25P24278 435 aa12.64□□□□□ -0.39
COL1A2-201ENST00000297268 SLC38A11Q08AI6 406 aa12.64□□□□□ -0.39
COL1A2-201ENST00000297268 FAM173AQ9BQD7 235 aa12.64□□□□□ -0.39
COL1A2-201ENST00000297268 LIPGQ9Y5X9 500 aa12.64□□□□□ -0.39
COL1A2-201ENST00000297268 TRAV8-7A0A075B6U6 113 aa12.64□□□□□ -0.39
COL1A2-201ENST00000297268 SPTY2D1-AS1A0A0U1RR47 76 aa12.64□□□□□ -0.39
COL1A2-201ENST00000297268 GALR2O43603 387 aaPredicted RBP12.64□□□□□ -0.39
COL1A2-201ENST00000297268 CISD3P0C7P0 127 aa12.64□□□□□ -0.39
COL1A2-201ENST00000297268 TMIGD3P0DMS9 266 aaPredicted RBP12.64□□□□□ -0.39
COL1A2-201ENST00000297268 RAB35Q15286 201 aa12.64□□□□□ -0.39
COL1A2-201ENST00000297268 ZNF770Q6IQ21 691 aaPredicted RBP12.64□□□□□ -0.39
COL1A2-201ENST00000297268 SIT1Q9Y3P8 196 aa12.64□□□□□ -0.39
COL1A2-201ENST00000297268 SIRT4Q9Y6E7 314 aaPredicted RBP12.64□□□□□ -0.39
COL1A2-201ENST00000297268 NINQ8N4C6 2090 aa12.64□□□□□ -0.39
COL1A2-201ENST00000297268 ELOA3CA0A087WX78 387 aaPredicted RBP12.64□□□□□ -0.39
COL1A2-201ENST00000297268 RTL8BQ17RB0 113 aa12.64□□□□□ -0.39
COL1A2-201ENST00000297268 PECRQ9BY49 303 aa12.64□□□□□ -0.39
COL1A2-201ENST00000297268 SERTM2A0A1B0GWG4 89 aa12.64□□□□□ -0.39
COL1A2-201ENST00000297268 SLC31A2O15432 143 aa12.64□□□□□ -0.39
COL1A2-201ENST00000297268 FGF8P55075 233 aaPredicted RBP12.64□□□□□ -0.39
COL1A2-201ENST00000297268 MCHR2Q969V1 340 aa12.64□□□□□ -0.39
COL1A2-201ENST00000297268 LRRC61Q9BV99 259 aa12.64□□□□□ -0.39
COL1A2-201ENST00000297268 ZFC3H1O60293 1989 aaKnown RBP12.64□□□□□ -0.39
COL1A2-201ENST00000297268 ABCA3Q99758 1704 aa12.64□□□□□ -0.39
COL1A2-201ENST00000297268 LTBP4Q8N2S1 1624 aa12.64□□□□□ -0.39
COL1A2-201ENST00000297268 CTSDP07339 412 aaPredicted RBP12.63□□□□□ -0.39
COL1A2-201ENST00000297268 UBALD1Q8TB05 177 aa12.63□□□□□ -0.39
COL1A2-201ENST00000297268 DEFB127Q9H1M4 99 aa12.63□□□□□ -0.39
COL1A2-201ENST00000297268 STRCP1A6NGW2 1772 aa12.63□□□□□ -0.39
COL1A2-201ENST00000297268 A0A087X0M5 115 aa12.63□□□□□ -0.39
COL1A2-201ENST00000297268 A0A1B0GX30 115 aa12.63□□□□□ -0.39
COL1A2-201ENST00000297268 LILRA5A6NI73 299 aa12.63□□□□□ -0.39
COL1A2-201ENST00000297268 OR4C45A6NMZ5 311 aa12.63□□□□□ -0.39
COL1A2-201ENST00000297268 ALG1L2C9J202 215 aa12.63□□□□□ -0.39
COL1A2-201ENST00000297268 CBR3O75828 277 aa12.63□□□□□ -0.39
COL1A2-201ENST00000297268 CNIH1O95406 144 aa12.63□□□□□ -0.39
COL1A2-201ENST00000297268 BPIFB3P59826 476 aa12.63□□□□□ -0.39
COL1A2-201ENST00000297268 COX14Q96I36 57 aa12.63□□□□□ -0.39
COL1A2-201ENST00000297268 RAB33BQ9H082 229 aa12.63□□□□□ -0.39
COL1A2-201ENST00000297268 ERRFI1Q9UJM3 462 aaPredicted RBP12.63□□□□□ -0.39
COL1A2-201ENST00000297268 SULT1A1P50225 295 aa12.63□□□□□ -0.39
COL1A2-201ENST00000297268 TMEM240Q5SV17 173 aa12.63□□□□□ -0.39
COL1A2-201ENST00000297268 OVCH2Q7RTZ1 564 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms