RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 SMAD6O43541 496 aaKnown RBP10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 GUSBP08236 651 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 CTXN2P0C2S0 81 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 AREGP15514 252 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 PCMT1P22061 227 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 CD1BP29016 333 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 CLDND1Q9NY35 253 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 EP300Q09472 2414 aaPredicted RBP10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 G3V3Y1 287 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 LOC389332A0A1B0GUA5 103 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 HMGN4O00479 90 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 FLT3LGP49771 235 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 MT-ATP6P00846 226 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 ADRA1AP35348 466 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 LYSMD4Q5XG99 296 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 LRRC37A3O60309 1634 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 F5H697 171 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 GPR75O95800 540 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 ASIC5Q9NY37 505 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 TINAGQ9UJW2 476 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 OR4C45A6NMZ5 311 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 CSNK1DP48730 415 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 AGFG1P52594 562 aaKnown RBP10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 OR1N2Q8NGR9 330 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 OR11L1Q8NGX0 322 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 ATOH1Q92858 354 aaPredicted RBP10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 DEFB118Q96PH6 123 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 SPAG8Q99932 426 aaPredicted RBP10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 TEX101Q9BY14 249 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 IL17CQ9P0M4 197 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 BSGP35613 385 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 RING1Q06587 406 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 EOGTQ5NDL2 527 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 PRAMEF20Q5VT98 475 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 TRMT61AQ96FX7 289 aaKnown RBP10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 WDR83Q9BRX9 315 aaKnown RBP10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 DNAJC4Q9NNZ3 241 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 MBPP02686 304 aaPredicted RBP10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 GPX2P18283 190 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 IL3RAP26951 378 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 ZNF137PP52743 207 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 VAMP5O95183 116 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 DMWDQ09019 674 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 IZUMO4Q1ZYL8 232 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 OR10AD1Q8NGE0 317 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 ZFP30Q9Y2G7 519 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 DNPH1O43598 174 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 HIST1H1EP10412 219 aaKnown RBP10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 SLC35B1P78383 322 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 ZNF840PA6NDX5 716 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 METTL12A8MUP2 240 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 HHEXQ03014 270 aa10.59□□□□□ -0.71
SHROOM3-201ENST00000296043 TEX30Q5JUR7 227 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 C1orf140Q5VVS0 124 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 D2HGDHQ8N465 521 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 TAAR6Q96RI8 345 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 CMC2Q9NRP2 79 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 OBP2AQ9NY56 170 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 METTL1Q9UBP6 276 aaKnown RBP10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 RGPD5Q99666 1765 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 MELTFP08582 738 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 INHBBP09529 407 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 AMER3Q8N944 861 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 MRIQ9BWK5 157 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 ZBTB42B2RXF5 422 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 LURAP1LQ8IV03 231 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 SNURFLB1AK76 121 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 ZNF506Q5JVG8 444 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 FLYWCH2Q96CP2 140 aaKnown RBP10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 S1PR3Q99500 378 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 C4orf47A7E2U8 309 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 GALR2O43603 387 aaPredicted RBP10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 HERVK_113P61574 105 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 XKR7Q5GH72 579 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 AAED1Q7RTV5 226 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 PUSL1Q8N0Z8 303 aaKnown RBP10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 RNF133Q8WVZ7 376 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 TM4SF18Q96CE8 201 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 DERL1Q9BUN8 251 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 TDRD15B5MCY1 1934 aaKnown RBP10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 RNASE1P07998 156 aaKnown RBP10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 SELEP16581 610 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 PRSS54Q6PEW0 395 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 OR10G4Q8NGN3 311 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 OR10G9Q8NGN4 311 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 OR10G7Q8NGN6 311 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 GAL3ST2Q9H3Q3 398 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 TMEM184BQ9Y519 407 aaPredicted RBP10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 RGPD1P0DJD0 1748 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 SLAMF6Q96DU3 332 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 DHCR7Q9UBM7 475 aaKnown RBP10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 MTFP1Q9UDX5 166 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 OPN4Q9UHM6 478 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 IGHA2P01877 340 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 TMEM207Q6UWW9 146 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 CACNA1EQ15878 2313 aa10.58□□□□□ -0.72
SHROOM3-201ENST00000296043 H0YGG7 62 aa10.57□□□□□ -0.72
SHROOM3-201ENST00000296043 LAIR1Q6GTX8 287 aa10.57□□□□□ -0.72
SHROOM3-201ENST00000296043 OR8B3Q8NGG8 313 aa10.57□□□□□ -0.72
SHROOM3-201ENST00000296043 PCGF1Q9BSM1 259 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms