RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 SUMO3P55854 103 aaPredicted RBP24.06■■□□□ 1.44
CBX4-201ENST00000269397 PIGPP57054 158 aa24.06■■□□□ 1.44
CBX4-201ENST00000269397 FAM3AP98173 230 aa24.06■■□□□ 1.44
CBX4-201ENST00000269397 SURF2Q15527 256 aaPredicted RBP24.06■■□□□ 1.44
CBX4-201ENST00000269397 TMEM176BQ3YBM2 270 aaPredicted RBP24.06■■□□□ 1.44
CBX4-201ENST00000269397 ANKRD37Q7Z713 158 aa24.06■■□□□ 1.44
CBX4-201ENST00000269397 FAM24BQ8N5W8 94 aa24.06■■□□□ 1.44
CBX4-201ENST00000269397 NAXEQ8NCW5 288 aa24.06■■□□□ 1.44
CBX4-201ENST00000269397 LYPD6BQ8NI32 183 aa24.06■■□□□ 1.44
CBX4-201ENST00000269397 FAAP24Q9BTP7 215 aa24.06■■□□□ 1.44
CBX4-201ENST00000269397 FAM212BQ9NTI7 297 aaPredicted RBP24.06■■□□□ 1.44
CBX4-201ENST00000269397 PIGLQ9Y2B2 252 aa24.06■■□□□ 1.44
CBX4-201ENST00000269397 MASP2O00187 686 aa24.06■■□□□ 1.44
CBX4-201ENST00000269397 UBE2CO00762 179 aa24.06■■□□□ 1.44
CBX4-201ENST00000269397 MT-ND4LP03901 98 aa24.06■■□□□ 1.44
CBX4-201ENST00000269397 MRGPRX4Q96LA9 322 aa24.06■■□□□ 1.44
CBX4-201ENST00000269397 PISDQ9UG56 409 aa24.06■■□□□ 1.44
CBX4-201ENST00000269397 TRAV20A0A0B4J274 112 aa24.05■■□□□ 1.44
CBX4-201ENST00000269397 CRYM-AS1A6NIL9 109 aa24.05■■□□□ 1.44
CBX4-201ENST00000269397 ANGPTL7O43827 346 aa24.05■■□□□ 1.44
CBX4-201ENST00000269397 DBHP09172 617 aa24.05■■□□□ 1.44
CBX4-201ENST00000269397 ASCL1P50553 236 aa24.05■■□□□ 1.44
CBX4-201ENST00000269397 ZNF84P51523 738 aa24.05■■□□□ 1.44
CBX4-201ENST00000269397 ADAM5Q6NVV9 412 aa24.05■■□□□ 1.44
CBX4-201ENST00000269397 BRICD5Q6PL45 260 aa24.05■■□□□ 1.44
CBX4-201ENST00000269397 NFAM1Q8NET5 270 aaPredicted RBP24.05■■□□□ 1.44
CBX4-201ENST00000269397 DYRK2Q92630 601 aa24.05■■□□□ 1.44
CBX4-201ENST00000269397 ZNF501Q96CX3 271 aaPredicted RBP24.05■■□□□ 1.44
CBX4-201ENST00000269397 FBXO7Q9Y3I1 522 aa24.05■■□□□ 1.44
CBX4-201ENST00000269397 POMT1Q9Y6A1 747 aa24.05■■□□□ 1.44
CBX4-201ENST00000269397 CLDN17P56750 224 aa24.05■■□□□ 1.44
CBX4-201ENST00000269397 FXYD4P59646 89 aa24.05■■□□□ 1.44
CBX4-201ENST00000269397 C20orf196Q8IYI0 205 aa24.05■■□□□ 1.44
CBX4-201ENST00000269397 TMEM156Q8N614 296 aa24.05■■□□□ 1.44
CBX4-201ENST00000269397 UBAC2Q8NBM4 344 aa24.05■■□□□ 1.44
CBX4-201ENST00000269397 OR6X1Q8NH79 312 aa24.05■■□□□ 1.44
CBX4-201ENST00000269397 TXNL1O43396 289 aa24.04■■□□□ 1.44
CBX4-201ENST00000269397 PRH1P02810 166 aa24.04■■□□□ 1.44
CBX4-201ENST00000269397 HEXBP07686 556 aa24.04■■□□□ 1.44
CBX4-201ENST00000269397 SMIM6P0DI80 62 aa24.04■■□□□ 1.44
CBX4-201ENST00000269397 OR5H8P0DN80 308 aa24.04■■□□□ 1.44
CBX4-201ENST00000269397 CAMLGP49069 296 aa24.04■■□□□ 1.44
CBX4-201ENST00000269397 LYZL2Q7Z4W2 148 aa24.04■■□□□ 1.44
CBX4-201ENST00000269397 PLXDC1Q8IUK5 500 aa24.04■■□□□ 1.44
CBX4-201ENST00000269397 ZNF561Q8N587 486 aa24.04■■□□□ 1.44
CBX4-201ENST00000269397 HSD17B11Q8NBQ5 300 aa24.04■■□□□ 1.44
CBX4-201ENST00000269397 CD300LFQ8TDQ1 290 aa24.04■■□□□ 1.44
CBX4-201ENST00000269397 SCRT1Q9BWW7 348 aa24.04■■□□□ 1.44
CBX4-201ENST00000269397 OR5AC1P0C628 307 aa24.04■■□□□ 1.44
CBX4-201ENST00000269397 NQO2P16083 231 aa24.04■■□□□ 1.44
CBX4-201ENST00000269397 AGAP20933 346 aa24.04■■□□□ 1.44
CBX4-201ENST00000269397 GHRLQ9UBU3 117 aa24.04■■□□□ 1.44
CBX4-201ENST00000269397 NXT1Q9UKK6 140 aaKnown RBP24.04■■□□□ 1.44
CBX4-201ENST00000269397 A0A1W2PPE2 198 aa24.03■■□□□ 1.44
CBX4-201ENST00000269397 CTSDP07339 412 aaPredicted RBP24.03■■□□□ 1.44
CBX4-201ENST00000269397 PAX6P26367 422 aa24.03■■□□□ 1.44
CBX4-201ENST00000269397 GRB2P62993 217 aaKnown RBP24.03■■□□□ 1.44
CBX4-201ENST00000269397 TAF9Q16594 264 aa24.03■■□□□ 1.44
CBX4-201ENST00000269397 PHLDA2Q53GA4 152 aa24.03■■□□□ 1.44
CBX4-201ENST00000269397 OGFOD3Q6PK18 319 aa24.03■■□□□ 1.44
CBX4-201ENST00000269397 TSTD1Q8NFU3 115 aa24.03■■□□□ 1.44
CBX4-201ENST00000269397 FAM221AA4D161 298 aa24.03■■□□□ 1.44
CBX4-201ENST00000269397 OR2J2O76002 312 aa24.03■■□□□ 1.44
CBX4-201ENST00000269397 PTGDSP41222 190 aa24.03■■□□□ 1.44
CBX4-201ENST00000269397 RPUSD3Q6P087 351 aaKnown RBP24.03■■□□□ 1.44
CBX4-201ENST00000269397 TCEAL3Q969E4 200 aa24.03■■□□□ 1.44
CBX4-201ENST00000269397 SHANK1Q9Y566 2161 aa24.03■■□□□ 1.44
CBX4-201ENST00000269397 ZNF850A8MQ14 1090 aa24.02■■□□□ 1.44
CBX4-201ENST00000269397 UMAD1C9J7I0 102 aa24.02■■□□□ 1.44
CBX4-201ENST00000269397 OR13C7P0DN81 318 aa24.02■■□□□ 1.44
CBX4-201ENST00000269397 CD27P26842 260 aa24.02■■□□□ 1.44
CBX4-201ENST00000269397 CSNK1EP49674 416 aaKnown RBP24.02■■□□□ 1.44
CBX4-201ENST00000269397 ANXA10Q9UJ72 324 aa24.02■■□□□ 1.44
CBX4-201ENST00000269397 SPRY1O43609 319 aaPredicted RBP24.02■■□□□ 1.44
CBX4-201ENST00000269397 DUX1O43812 170 aa24.02■■□□□ 1.44
CBX4-201ENST00000269397 S100A8P05109 93 aa24.02■■□□□ 1.44
CBX4-201ENST00000269397 DANCRP0C864 163 aa24.02■■□□□ 1.44
CBX4-201ENST00000269397 HNRNPKP61978 463 aaKnown RBP eCLIP24.02■■□□□ 1.44
CBX4-201ENST00000269397 NHLH2Q02577 135 aa24.02■■□□□ 1.44
CBX4-201ENST00000269397 PHYHD1Q5SRE7 291 aa24.02■■□□□ 1.44
CBX4-201ENST00000269397 OXGR1Q96P68 337 aa24.02■■□□□ 1.44
CBX4-201ENST00000269397 PIGQQ9BRB3 760 aa24.02■■□□□ 1.44
CBX4-201ENST00000269397 ZNF251Q9BRH9 671 aa24.02■■□□□ 1.44
CBX4-201ENST00000269397 GPR173Q9NS66 373 aa24.02■■□□□ 1.44
CBX4-201ENST00000269397 RFNGQ9Y644 331 aa24.02■■□□□ 1.44
CBX4-201ENST00000269397 DHRS3O75911 302 aa24.01■■□□□ 1.43
CBX4-201ENST00000269397 RAB5AP20339 215 aa24.01■■□□□ 1.43
CBX4-201ENST00000269397 FAM209BQ5JX69 171 aa24.01■■□□□ 1.43
CBX4-201ENST00000269397 TM2D1Q9BX74 207 aa24.01■■□□□ 1.43
CBX4-201ENST00000269397 RNF212Q495C1 297 aa24.01■■□□□ 1.43
CBX4-201ENST00000269397 NSUN5P2Q63ZY6 315 aa24.01■■□□□ 1.43
CBX4-201ENST00000269397 PLXDC2Q6UX71 529 aa24.01■■□□□ 1.43
CBX4-201ENST00000269397 HAS2Q92819 552 aa24.01■■□□□ 1.43
CBX4-201ENST00000269397 ZMAT5Q9UDW3 170 aaKnown RBP24.01■■□□□ 1.43
CBX4-201ENST00000269397 EML6Q6ZMW3 1958 aa24.01■■□□□ 1.43
CBX4-201ENST00000269397 IGHV3-15A0A0B4J1V0 119 aa24■■□□□ 1.43
CBX4-201ENST00000269397 TIAF1O95411 115 aa24■■□□□ 1.43
CBX4-201ENST00000269397 GLP1RP43220 463 aa24■■□□□ 1.43
CBX4-201ENST00000269397 PRAMEF20Q5VT98 475 aa24■■□□□ 1.43
CBX4-201ENST00000269397 OR52M1Q8NGK5 317 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms