RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 SNRPGP62308 76 aaKnown RBP13.21□□□□□ -0.29
USE1-201ENST00000263897 ZNF85Q03923 595 aa13.21□□□□□ -0.29
USE1-201ENST00000263897 ODF4Q2M2E3 257 aa13.21□□□□□ -0.29
USE1-201ENST00000263897 ZIK1Q3SY52 487 aaPredicted RBP13.21□□□□□ -0.29
USE1-201ENST00000263897 PDZD9Q8IXQ8 264 aa13.21□□□□□ -0.29
USE1-201ENST00000263897 PIP4P2Q8N4L2 257 aa13.21□□□□□ -0.29
USE1-201ENST00000263897 SGMS2Q8NHU3 365 aa13.21□□□□□ -0.29
USE1-201ENST00000263897 TAF15Q92804 592 aaKnown RBP eCLIP13.21□□□□□ -0.29
USE1-201ENST00000263897 ZNF488Q96MN9 340 aa13.21□□□□□ -0.29
USE1-201ENST00000263897 TNFRSF19Q9NS68 423 aa13.21□□□□□ -0.29
USE1-201ENST00000263897 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.21□□□□□ -0.29
USE1-201ENST00000263897 POMT1Q9Y6A1 747 aa13.21□□□□□ -0.29
USE1-201ENST00000263897 MGAM2Q2M2H8 2515 aa13.2□□□□□ -0.3
USE1-201ENST00000263897 A0A0U1RQK1 487 aa13.2□□□□□ -0.3
USE1-201ENST00000263897 FAM181BA6NEQ2 426 aa13.2□□□□□ -0.3
USE1-201ENST00000263897 ANKRD61A6NGH8 418 aa13.2□□□□□ -0.3
USE1-201ENST00000263897 RFPL4AA6NLU0 287 aa13.2□□□□□ -0.3
USE1-201ENST00000263897 POM121CA8CG34 1229 aa13.2□□□□□ -0.3
USE1-201ENST00000263897 RFPL4AL1F8VTS6 287 aa13.2□□□□□ -0.3
USE1-201ENST00000263897 SYT7O43581 403 aa13.2□□□□□ -0.3
USE1-201ENST00000263897 ENTPD6O75354 484 aa13.2□□□□□ -0.3
USE1-201ENST00000263897 MPZP25189 248 aa13.2□□□□□ -0.3
USE1-201ENST00000263897 PRDX2P32119 198 aa13.2□□□□□ -0.3
USE1-201ENST00000263897 ISL1P61371 349 aa13.2□□□□□ -0.3
USE1-201ENST00000263897 OCLNQ16625 522 aa13.2□□□□□ -0.3
USE1-201ENST00000263897 SMIM21Q3B7S5 101 aa13.2□□□□□ -0.3
USE1-201ENST00000263897 KCTD20Q7Z5Y7 419 aa13.2□□□□□ -0.3
USE1-201ENST00000263897 ANGPTL5Q86XS5 388 aa13.2□□□□□ -0.3
USE1-201ENST00000263897 PRSS35Q8N3Z0 413 aa13.2□□□□□ -0.3
USE1-201ENST00000263897 CBR4Q8N4T8 237 aa13.2□□□□□ -0.3
USE1-201ENST00000263897 CD177Q8N6Q3 437 aa13.2□□□□□ -0.3
USE1-201ENST00000263897 CCDC54Q8NEL0 328 aa13.2□□□□□ -0.3
USE1-201ENST00000263897 TBC1D15Q8TC07 691 aa13.2□□□□□ -0.3
USE1-201ENST00000263897 NPRL2Q8WTW4 380 aa13.2□□□□□ -0.3
USE1-201ENST00000263897 SSMEM1Q8WWF3 244 aa13.2□□□□□ -0.3
USE1-201ENST00000263897 TNFRSF14Q92956 283 aa13.2□□□□□ -0.3
USE1-201ENST00000263897 ADI1Q9BV57 179 aa13.2□□□□□ -0.3
USE1-201ENST00000263897 CHIAQ9BZP6 476 aa13.2□□□□□ -0.3
USE1-201ENST00000263897 SIRT7Q9NRC8 400 aa13.2□□□□□ -0.3
USE1-201ENST00000263897 POLDIP2Q9Y2S7 368 aa13.2□□□□□ -0.3
USE1-201ENST00000263897 A0A1W2PQ09 198 aa13.19□□□□□ -0.3
USE1-201ENST00000263897 RNASEK-C17orf49H0YIS7 233 aa13.19□□□□□ -0.3
USE1-201ENST00000263897 J3QRE1 110 aa13.19□□□□□ -0.3
USE1-201ENST00000263897 M0R1W7 72 aa13.19□□□□□ -0.3
USE1-201ENST00000263897 GUCA2AQ02747 115 aa13.19□□□□□ -0.3
USE1-201ENST00000263897 UBE2V2Q15819 145 aa13.19□□□□□ -0.3
USE1-201ENST00000263897 TP53I3Q53FA7 332 aa13.19□□□□□ -0.3
USE1-201ENST00000263897 MEDAGQ5VYS4 303 aa13.19□□□□□ -0.3
USE1-201ENST00000263897 FIP1L1Q6UN15 594 aaKnown RBP13.19□□□□□ -0.3
USE1-201ENST00000263897 SHISA2Q6UWI4 295 aa13.19□□□□□ -0.3
USE1-201ENST00000263897 CALHM1Q8IU99 346 aa13.19□□□□□ -0.3
USE1-201ENST00000263897 TMEM185AQ8NFB2 350 aa13.19□□□□□ -0.3
USE1-201ENST00000263897 RNF166Q96A37 237 aaPredicted RBP13.19□□□□□ -0.3
USE1-201ENST00000263897 NRIP2Q9BQI9 281 aa13.19□□□□□ -0.3
USE1-201ENST00000263897 UNKLQ9H9P5 680 aaKnown RBP13.19□□□□□ -0.3
USE1-201ENST00000263897 ELL3Q9HB65 397 aaPredicted RBP13.19□□□□□ -0.3
USE1-201ENST00000263897 GNG8Q9UK08 70 aa13.19□□□□□ -0.3
USE1-201ENST00000263897 SLC7A11Q9UPY5 501 aa13.19□□□□□ -0.3
USE1-201ENST00000263897 FAM96BQ9Y3D0 163 aa13.19□□□□□ -0.3
USE1-201ENST00000263897 TRBV23-1A0A0A0MS06 115 aa13.18□□□□□ -0.3
USE1-201ENST00000263897 H3BSH0 61 aa13.18□□□□□ -0.3
USE1-201ENST00000263897 EBAG9O00559 213 aa13.18□□□□□ -0.3
USE1-201ENST00000263897 NXPH2O95156 264 aa13.18□□□□□ -0.3
USE1-201ENST00000263897 CRYBA1P05813 215 aa13.18□□□□□ -0.3
USE1-201ENST00000263897 OMGP23515 440 aa13.18□□□□□ -0.3
USE1-201ENST00000263897 EEF1B2P24534 225 aaKnown RBP13.18□□□□□ -0.3
USE1-201ENST00000263897 KIR3DL2P43630 455 aa13.18□□□□□ -0.3
USE1-201ENST00000263897 IER3P46695 156 aa13.18□□□□□ -0.3
USE1-201ENST00000263897 DLX1P56177 255 aa13.18□□□□□ -0.3
USE1-201ENST00000263897 ERVK11-1P61568 191 aa13.18□□□□□ -0.3
USE1-201ENST00000263897 PRB3Q04118 309 aaPredicted RBP13.18□□□□□ -0.3
USE1-201ENST00000263897 IL24Q13007 206 aa13.18□□□□□ -0.3
USE1-201ENST00000263897 FAM220AQ7Z4H9 259 aa13.18□□□□□ -0.3
USE1-201ENST00000263897 LDLRAD3Q86YD5 345 aa13.18□□□□□ -0.3
USE1-201ENST00000263897 RDH10Q8IZV5 341 aa13.18□□□□□ -0.3
USE1-201ENST00000263897 ZNF561Q8N587 486 aa13.18□□□□□ -0.3
USE1-201ENST00000263897 TRMT10AQ8TBZ6 339 aaKnown RBP13.18□□□□□ -0.3
USE1-201ENST00000263897 RNFT2Q96EX2 444 aa13.18□□□□□ -0.3
USE1-201ENST00000263897 PKIBQ9C010 78 aa13.18□□□□□ -0.3
USE1-201ENST00000263897 METTL8Q9H825 291 aaKnown RBP13.18□□□□□ -0.3
USE1-201ENST00000263897 PLEKHA1Q9HB21 404 aa13.18□□□□□ -0.3
USE1-201ENST00000263897 HES4Q9HCC6 221 aa13.18□□□□□ -0.3
USE1-201ENST00000263897 CAB39Q9Y376 341 aaPredicted RBP13.18□□□□□ -0.3
USE1-201ENST00000263897 MMP24Q9Y5R2 645 aa13.18□□□□□ -0.3
USE1-201ENST00000263897 FAM230AA0A1W2PPH8 454 aa13.17□□□□□ -0.3
USE1-201ENST00000263897 DAPL1A0PJW8 107 aa13.17□□□□□ -0.3
USE1-201ENST00000263897 SLC1A7O00341 560 aa13.17□□□□□ -0.3
USE1-201ENST00000263897 NPFFO15130 113 aa13.17□□□□□ -0.3
USE1-201ENST00000263897 SERPINA3P01011 423 aa13.17□□□□□ -0.3
USE1-201ENST00000263897 MDKP21741 143 aaPredicted RBP13.17□□□□□ -0.3
USE1-201ENST00000263897 UBE2E1P51965 193 aa13.17□□□□□ -0.3
USE1-201ENST00000263897 FUT6P51993 359 aa13.17□□□□□ -0.3
USE1-201ENST00000263897 CAPZA1P52907 286 aa13.17□□□□□ -0.3
USE1-201ENST00000263897 ACTC1P68032 377 aa13.17□□□□□ -0.3
USE1-201ENST00000263897 ACTA1P68133 377 aa13.17□□□□□ -0.3
USE1-201ENST00000263897 BLMHQ13867 455 aa13.17□□□□□ -0.3
USE1-201ENST00000263897 FDX2Q6P4F2 183 aa13.17□□□□□ -0.3
USE1-201ENST00000263897 OR2G2Q8NGZ5 317 aa13.17□□□□□ -0.3
USE1-201ENST00000263897 DYRK2Q92630 601 aa13.17□□□□□ -0.3
USE1-201ENST00000263897 C10orf35Q96D05 121 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms